RNA–Protein interactions for RNA: ENST00000564172.1

GDE1-203, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene GDE1, Length 2,238 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-203ENST00000564172 C1orf50Q9BV19 199 aa17.03■□□□□ 0.32
GDE1-203ENST00000564172 TMEM168Q9H0V1 697 aa17.03■□□□□ 0.32
GDE1-203ENST00000564172 TP63Q9H3D4 680 aaPredicted RBP17.03■□□□□ 0.32
GDE1-203ENST00000564172 FARSBQ9NSD9 589 aaKnown RBP17.03■□□□□ 0.32
GDE1-203ENST00000564172 DAPK2Q9UIK4 370 aa17.03■□□□□ 0.32
GDE1-203ENST00000564172 KCNE2Q9Y6J6 123 aa17.03■□□□□ 0.32
GDE1-203ENST00000564172 E7EQ34 232 aa17.02■□□□□ 0.32
GDE1-203ENST00000564172 MANBAO00462 879 aa17.02■□□□□ 0.32
GDE1-203ENST00000564172 UGDHO60701 494 aa17.02■□□□□ 0.32
GDE1-203ENST00000564172 NPPBP16860 134 aa17.02■□□□□ 0.32
GDE1-203ENST00000564172 AK4P27144 223 aaPredicted RBP17.02■□□□□ 0.32
GDE1-203ENST00000564172 TXNL4AP83876 142 aaKnown RBP17.02■□□□□ 0.32
GDE1-203ENST00000564172 PCDH1Q08174 1060 aa17.02■□□□□ 0.32
GDE1-203ENST00000564172 ITGADQ13349 1161 aa17.02■□□□□ 0.32
GDE1-203ENST00000564172 LIPJQ5W064 366 aa17.02■□□□□ 0.32
GDE1-203ENST00000564172 SUSD1Q6UWL2 747 aa17.02■□□□□ 0.32
GDE1-203ENST00000564172 DEFB119Q8N690 84 aa17.02■□□□□ 0.32
GDE1-203ENST00000564172 FBXO27Q8NI29 283 aa17.02■□□□□ 0.32
GDE1-203ENST00000564172 USP7Q93009 1102 aa17.02■□□□□ 0.32
GDE1-203ENST00000564172 ALPK1Q96QP1 1244 aa17.02■□□□□ 0.32
GDE1-203ENST00000564172 MENTQ9BUN1 341 aa17.02■□□□□ 0.32
GDE1-203ENST00000564172 IMP3Q9NV31 184 aaKnown RBP17.02■□□□□ 0.32
GDE1-203ENST00000564172 ZNF490Q9ULM2 529 aaPredicted RBP17.02■□□□□ 0.32
GDE1-203ENST00000564172 CCL27Q9Y4X3 112 aa17.02■□□□□ 0.32
GDE1-203ENST00000564172 OR52A4PA6NMU1 304 aa17.02■□□□□ 0.32
GDE1-203ENST00000564172 ZNF839A8K0R7 811 aa17.02■□□□□ 0.32
GDE1-203ENST00000564172 METTL12A8MUP2 240 aa17.02■□□□□ 0.32
GDE1-203ENST00000564172 H3BNH8 94 aa17.02■□□□□ 0.32
GDE1-203ENST00000564172 B3GALNT1O75752 331 aa17.02■□□□□ 0.32
GDE1-203ENST00000564172 ERGP11308 486 aa17.02■□□□□ 0.32
GDE1-203ENST00000564172 DSTNP60981 165 aa17.02■□□□□ 0.32
GDE1-203ENST00000564172 STX1BP61266 288 aa17.02■□□□□ 0.32
GDE1-203ENST00000564172 TSTA3Q13630 321 aaPredicted RBP17.02■□□□□ 0.32
GDE1-203ENST00000564172 ARHGAP19Q14CB8 494 aa17.02■□□□□ 0.32
GDE1-203ENST00000564172 NPTX1Q15818 432 aa17.02■□□□□ 0.32
GDE1-203ENST00000564172 XKR6Q5GH73 641 aa17.02■□□□□ 0.32
GDE1-203ENST00000564172 C6orf10Q5SRN2 563 aa17.02■□□□□ 0.32
GDE1-203ENST00000564172 HID1Q8IV36 788 aa17.02■□□□□ 0.32
GDE1-203ENST00000564172 SFRP1Q8N474 314 aa17.02■□□□□ 0.32
GDE1-203ENST00000564172 CCL4L1Q8NHW4 92 aa17.02■□□□□ 0.32
GDE1-203ENST00000564172 MAGEB10Q96LZ2 347 aaPredicted RBP17.02■□□□□ 0.32
GDE1-203ENST00000564172 NRTNQ99748 197 aa17.02■□□□□ 0.32
GDE1-203ENST00000564172 GPR27Q9NS67 375 aa17.02■□□□□ 0.32
GDE1-203ENST00000564172 GPRC5BQ9NZH0 403 aa17.02■□□□□ 0.32
GDE1-203ENST00000564172 TBC1D29Q9UFV1 150 aa17.02■□□□□ 0.32
GDE1-203ENST00000564172 K7ESF4 209 aa17.01■□□□□ 0.31
GDE1-203ENST00000564172 PI15O43692 258 aa17.01■□□□□ 0.31
GDE1-203ENST00000564172 RASGRP1O95267 797 aa17.01■□□□□ 0.31
GDE1-203ENST00000564172 THEGLP0DJG4 465 aa17.01■□□□□ 0.31
GDE1-203ENST00000564172 COX4I1P13073 169 aa17.01■□□□□ 0.31
GDE1-203ENST00000564172 JUPP14923 745 aa17.01■□□□□ 0.31
GDE1-203ENST00000564172 CD22P20273 847 aa17.01■□□□□ 0.31
GDE1-203ENST00000564172 SQLEQ14534 574 aa17.01■□□□□ 0.31
GDE1-203ENST00000564172 TCEA2Q15560 299 aa17.01■□□□□ 0.31
GDE1-203ENST00000564172 SGO1Q5FBB7 561 aa17.01■□□□□ 0.31
GDE1-203ENST00000564172 C6orf136Q5SQH8 315 aa17.01■□□□□ 0.31
GDE1-203ENST00000564172 TRIM46Q7Z4K8 759 aa17.01■□□□□ 0.31
GDE1-203ENST00000564172 CADM4Q8NFZ8 388 aa17.01■□□□□ 0.31
GDE1-203ENST00000564172 NEIL2Q969S2 332 aa17.01■□□□□ 0.31
GDE1-203ENST00000564172 COQ7Q99807 217 aa17.01■□□□□ 0.31
GDE1-203ENST00000564172 TMEM9Q9P0T7 183 aa17.01■□□□□ 0.31
GDE1-203ENST00000564172 SUCOQ9UBS9 1254 aaKnown RBP17.01■□□□□ 0.31
GDE1-203ENST00000564172 SNX6Q9UNH7 406 aa17.01■□□□□ 0.31
GDE1-203ENST00000564172 MYRFQ9Y2G1 1151 aa17.01■□□□□ 0.31
GDE1-203ENST00000564172 DGKBQ9Y6T7 804 aa17.01■□□□□ 0.31
GDE1-203ENST00000564172 SPTY2D1-AS1A0A0U1RR47 76 aa17.01■□□□□ 0.31
GDE1-203ENST00000564172 LINC00854A0A1B0GVQ3 168 aa17.01■□□□□ 0.31
GDE1-203ENST00000564172 FOXD2O60548 495 aaPredicted RBP17.01■□□□□ 0.31
GDE1-203ENST00000564172 PKLRP30613 574 aa17.01■□□□□ 0.31
GDE1-203ENST00000564172 HSD17B2P37059 387 aa17.01■□□□□ 0.31
GDE1-203ENST00000564172 ZXDAP98168 799 aa17.01■□□□□ 0.31
GDE1-203ENST00000564172 DOC2AQ14183 400 aa17.01■□□□□ 0.31
GDE1-203ENST00000564172 RPE65Q16518 533 aa17.01■□□□□ 0.31
GDE1-203ENST00000564172 ATP6AP1LQ52LC2 224 aa17.01■□□□□ 0.31
GDE1-203ENST00000564172 ANKRD26P1Q6NSI1 321 aa17.01■□□□□ 0.31
GDE1-203ENST00000564172 ABRAXAS1Q6UWZ7 409 aa17.01■□□□□ 0.31
GDE1-203ENST00000564172 SLC15A4Q8N697 577 aa17.01■□□□□ 0.31
GDE1-203ENST00000564172 HMGCLL1Q8TB92 370 aa17.01■□□□□ 0.31
GDE1-203ENST00000564172 MTFMTQ96DP5 389 aaKnown RBP17.01■□□□□ 0.31
GDE1-203ENST00000564172 SLC6A18Q96N87 628 aa17.01■□□□□ 0.31
GDE1-203ENST00000564172 PCED1AQ9H1Q7 454 aa17.01■□□□□ 0.31
GDE1-203ENST00000564172 RPF2Q9H7B2 306 aaKnown RBP17.01■□□□□ 0.31
GDE1-203ENST00000564172 STMN3Q9NZ72 180 aa17.01■□□□□ 0.31
GDE1-203ENST00000564172 AXIN1O15169 862 aa17■□□□□ 0.31
GDE1-203ENST00000564172 CD27P26842 260 aa17■□□□□ 0.31
GDE1-203ENST00000564172 DCKP27707 260 aa17■□□□□ 0.31
GDE1-203ENST00000564172 ACTR1BP42025 376 aa17■□□□□ 0.31
GDE1-203ENST00000564172 ATP4BP51164 291 aa17■□□□□ 0.31
GDE1-203ENST00000564172 ACTR1AP61163 376 aa17■□□□□ 0.31
GDE1-203ENST00000564172 TAGLNQ01995 201 aaKnown RBP17■□□□□ 0.31
GDE1-203ENST00000564172 WASH2PQ6VEQ5 465 aa17■□□□□ 0.31
GDE1-203ENST00000564172 SPATA19Q7Z5L4 167 aa17■□□□□ 0.31
GDE1-203ENST00000564172 CHERPQ8IWX8 916 aaKnown RBP17■□□□□ 0.31
GDE1-203ENST00000564172 KIAA2013Q8IYS2 634 aa17■□□□□ 0.31
GDE1-203ENST00000564172 C2orf73Q8N5S3 287 aaPredicted RBP17■□□□□ 0.31
GDE1-203ENST00000564172 RP9Q8TA86 221 aaKnown RBP17■□□□□ 0.31
GDE1-203ENST00000564172 SETD7Q8WTS6 366 aaKnown RBP17■□□□□ 0.31
GDE1-203ENST00000564172 SELENOMQ8WWX9 145 aa17■□□□□ 0.31
GDE1-203ENST00000564172 CAMK1GQ96NX5 476 aa17■□□□□ 0.31
GDE1-203ENST00000564172 DCUN1D5Q9BTE7 237 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms