RNA–Protein interactions for RNA: ENST00000560562.5

TNFAIP2-207, Transcript of TNF alpha induced protein 2, humanhuman

TSL 1 (best)

Gene TNFAIP2, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP2-207ENST00000560562 NSG1A0A0A6YYJ2 146 aa13.24□□□□□ -0.29
TNFAIP2-207ENST00000560562 IGHV3-20A0A0C4DH32 117 aa13.24□□□□□ -0.29
TNFAIP2-207ENST00000560562 TCRBV9S1A1TA0A576 114 aa13.24□□□□□ -0.29
TNFAIP2-207ENST00000560562 C4orf51C9J302 202 aa13.24□□□□□ -0.29
TNFAIP2-207ENST00000560562 H0YIG0 161 aa13.24□□□□□ -0.29
TNFAIP2-207ENST00000560562 VPS4BO75351 444 aa13.24□□□□□ -0.29
TNFAIP2-207ENST00000560562 HEXBP07686 556 aa13.24□□□□□ -0.29
TNFAIP2-207ENST00000560562 PRR35P0CG20 571 aa13.24□□□□□ -0.29
TNFAIP2-207ENST00000560562 SOX11P35716 441 aa13.24□□□□□ -0.29
TNFAIP2-207ENST00000560562 CCR8P51685 355 aa13.24□□□□□ -0.29
TNFAIP2-207ENST00000560562 GUCY2DQ02846 1103 aa13.24□□□□□ -0.29
TNFAIP2-207ENST00000560562 NDUFA9Q16795 377 aa13.24□□□□□ -0.29
TNFAIP2-207ENST00000560562 AGAP7PQ5VUJ5 663 aa13.24□□□□□ -0.29
TNFAIP2-207ENST00000560562 LINC00696Q6ZRV3 163 aa13.24□□□□□ -0.29
TNFAIP2-207ENST00000560562 NDUFAF7Q7L592 441 aa13.24□□□□□ -0.29
TNFAIP2-207ENST00000560562 GSPT2Q8IYD1 628 aaKnown RBP13.24□□□□□ -0.29
TNFAIP2-207ENST00000560562 IQCKQ8N0W5 287 aa13.24□□□□□ -0.29
TNFAIP2-207ENST00000560562 ZADH2Q8N4Q0 377 aa13.24□□□□□ -0.29
TNFAIP2-207ENST00000560562 AFAP1L2Q8N4X5 818 aa13.24□□□□□ -0.29
TNFAIP2-207ENST00000560562 FAM26EQ8N5C1 309 aa13.24□□□□□ -0.29
TNFAIP2-207ENST00000560562 ANKRD53Q8N9V6 530 aa13.24□□□□□ -0.29
TNFAIP2-207ENST00000560562 CAMKVQ8NCB2 501 aa13.24□□□□□ -0.29
TNFAIP2-207ENST00000560562 OR5T3Q8NGG3 340 aa13.24□□□□□ -0.29
TNFAIP2-207ENST00000560562 OR51Q1Q8NH59 317 aa13.24□□□□□ -0.29
TNFAIP2-207ENST00000560562 FBXO25Q8TCJ0 367 aa13.24□□□□□ -0.29
TNFAIP2-207ENST00000560562 BRIX1Q8TDN6 353 aaKnown RBP13.24□□□□□ -0.29
TNFAIP2-207ENST00000560562 PPP4R1Q8TF05 950 aa13.24□□□□□ -0.29
TNFAIP2-207ENST00000560562 PYROXD1Q8WU10 500 aa13.24□□□□□ -0.29
TNFAIP2-207ENST00000560562 SLC5A11Q8WWX8 675 aa13.24□□□□□ -0.29
TNFAIP2-207ENST00000560562 AGAP4Q96P64 663 aa13.24□□□□□ -0.29
TNFAIP2-207ENST00000560562 WDR77Q9BQA1 342 aaPredicted RBP13.24□□□□□ -0.29
TNFAIP2-207ENST00000560562 RBCK1Q9BYM8 510 aa13.24□□□□□ -0.29
TNFAIP2-207ENST00000560562 AICDAQ9GZX7 198 aa13.24□□□□□ -0.29
TNFAIP2-207ENST00000560562 ILKAPQ9H0C8 392 aaPredicted RBP13.24□□□□□ -0.29
TNFAIP2-207ENST00000560562 VPS4AQ9UN37 437 aa13.24□□□□□ -0.29
TNFAIP2-207ENST00000560562 UNC79Q9P2D8 2635 aa13.24□□□□□ -0.29
TNFAIP2-207ENST00000560562 TRBC2A0A5B9 178 aa13.23□□□□□ -0.29
TNFAIP2-207ENST00000560562 FAM159BA6NKW6 160 aa13.23□□□□□ -0.29
TNFAIP2-207ENST00000560562 NDC80O14777 642 aa13.23□□□□□ -0.29
TNFAIP2-207ENST00000560562 PHGDHO43175 533 aaKnown RBP13.23□□□□□ -0.29
TNFAIP2-207ENST00000560562 OR1F1O43749 312 aa13.23□□□□□ -0.29
TNFAIP2-207ENST00000560562 SEMA7AO75326 666 aa13.23□□□□□ -0.29
TNFAIP2-207ENST00000560562 ECHS1P30084 290 aa13.23□□□□□ -0.29
TNFAIP2-207ENST00000560562 XCR1P46094 333 aa13.23□□□□□ -0.29
TNFAIP2-207ENST00000560562 AVPR1BP47901 424 aa13.23□□□□□ -0.29
TNFAIP2-207ENST00000560562 REEP5Q00765 189 aa13.23□□□□□ -0.29
TNFAIP2-207ENST00000560562 CALCOCO2Q13137 446 aa13.23□□□□□ -0.29
TNFAIP2-207ENST00000560562 THOC6Q86W42 341 aaKnown RBP13.23□□□□□ -0.29
TNFAIP2-207ENST00000560562 NKAPQ8N5F7 415 aaKnown RBP13.23□□□□□ -0.29
TNFAIP2-207ENST00000560562 SIRT6Q8N6T7 355 aa13.23□□□□□ -0.29
TNFAIP2-207ENST00000560562 BBOF1Q8ND07 529 aa13.23□□□□□ -0.29
TNFAIP2-207ENST00000560562 CATSPER1Q8NEC5 780 aa13.23□□□□□ -0.29
TNFAIP2-207ENST00000560562 IMMP1LQ96LU5 166 aa13.23□□□□□ -0.29
TNFAIP2-207ENST00000560562 BARD1Q99728 777 aaKnown RBP13.23□□□□□ -0.29
TNFAIP2-207ENST00000560562 TRIM54Q9BYV2 358 aa13.23□□□□□ -0.29
TNFAIP2-207ENST00000560562 ZNF700Q9H0M5 742 aa13.23□□□□□ -0.29
TNFAIP2-207ENST00000560562 GPAMQ9HCL2 828 aa13.23□□□□□ -0.29
TNFAIP2-207ENST00000560562 MAP10Q9P2G4 905 aa13.23□□□□□ -0.29
TNFAIP2-207ENST00000560562 SLC22A14Q9Y267 594 aa13.23□□□□□ -0.29
TNFAIP2-207ENST00000560562 NAALAD2Q9Y3Q0 740 aa13.23□□□□□ -0.29
TNFAIP2-207ENST00000560562 OARD1Q9Y530 152 aa13.23□□□□□ -0.29
TNFAIP2-207ENST00000560562 EIF3HO15372 352 aaKnown RBP eCLIP13.22□□□□□ -0.29
TNFAIP2-207ENST00000560562 NDUFS4O43181 175 aa13.22□□□□□ -0.29
TNFAIP2-207ENST00000560562 FAM155BO75949 473 aa13.22□□□□□ -0.29
TNFAIP2-207ENST00000560562 ITGAMP11215 1152 aa13.22□□□□□ -0.29
TNFAIP2-207ENST00000560562 VARSP26640 1264 aaKnown RBP13.22□□□□□ -0.29
TNFAIP2-207ENST00000560562 GDF5P43026 501 aa13.22□□□□□ -0.29
TNFAIP2-207ENST00000560562 SCTRP47872 440 aa13.22□□□□□ -0.29
TNFAIP2-207ENST00000560562 SLC6A12P48065 614 aa13.22□□□□□ -0.29
TNFAIP2-207ENST00000560562 PLTPP55058 493 aa13.22□□□□□ -0.29
TNFAIP2-207ENST00000560562 OLR1P78380 273 aa13.22□□□□□ -0.29
TNFAIP2-207ENST00000560562 CDKL1Q00532 357 aa13.22□□□□□ -0.29
TNFAIP2-207ENST00000560562 HYAL2Q12891 473 aa13.22□□□□□ -0.29
TNFAIP2-207ENST00000560562 MFAP5Q13361 173 aa13.22□□□□□ -0.29
TNFAIP2-207ENST00000560562 EFTUD2Q15029 972 aaKnown RBP eCLIP13.22□□□□□ -0.29
TNFAIP2-207ENST00000560562 NR6A1Q15406 480 aa13.22□□□□□ -0.29
TNFAIP2-207ENST00000560562 EIF2S3LQ2VIR3 472 aaKnown RBP13.22□□□□□ -0.29
TNFAIP2-207ENST00000560562 FBXO48Q5FWF7 155 aa13.22□□□□□ -0.29
TNFAIP2-207ENST00000560562 UBAP2Q5T6F2 1119 aaKnown RBP13.22□□□□□ -0.29
TNFAIP2-207ENST00000560562 B3GNTL1Q67FW5 361 aaPredicted RBP13.22□□□□□ -0.29
TNFAIP2-207ENST00000560562 ISLR2Q6UXK2 745 aa13.22□□□□□ -0.29
TNFAIP2-207ENST00000560562 TMPRSS11BQ86T26 416 aa13.22□□□□□ -0.29
TNFAIP2-207ENST00000560562 KBTBD2Q8IY47 623 aa13.22□□□□□ -0.29
TNFAIP2-207ENST00000560562 MREGQ8N565 214 aa13.22□□□□□ -0.29
TNFAIP2-207ENST00000560562 ATL1Q8WXF7 558 aa13.22□□□□□ -0.29
TNFAIP2-207ENST00000560562 TM9SF4Q92544 642 aa13.22□□□□□ -0.29
TNFAIP2-207ENST00000560562 GPR22Q99680 433 aa13.22□□□□□ -0.29
TNFAIP2-207ENST00000560562 RBBP8Q99708 897 aa13.22□□□□□ -0.29
TNFAIP2-207ENST00000560562 POPDC3Q9HBV1 291 aa13.22□□□□□ -0.29
TNFAIP2-207ENST00000560562 LANCL2Q9NS86 450 aa13.22□□□□□ -0.29
TNFAIP2-207ENST00000560562 PTGFRNQ9P2B2 879 aa13.22□□□□□ -0.29
TNFAIP2-207ENST00000560562 SLC22A7Q9Y694 548 aa13.22□□□□□ -0.29
TNFAIP2-207ENST00000560562 ESYT3A0FGR9 886 aa13.22□□□□□ -0.29
TNFAIP2-207ENST00000560562 TAPBPO15533 448 aa13.22□□□□□ -0.29
TNFAIP2-207ENST00000560562 KLHL41O60662 606 aa13.22□□□□□ -0.29
TNFAIP2-207ENST00000560562 PRAMEF4O60810 478 aa13.22□□□□□ -0.29
TNFAIP2-207ENST00000560562 SEC24DO94855 1032 aaPredicted RBP13.22□□□□□ -0.29
TNFAIP2-207ENST00000560562 SERPINA7P05543 415 aa13.22□□□□□ -0.29
TNFAIP2-207ENST00000560562 SLC35G6P0C7Q6 338 aa13.22□□□□□ -0.29
TNFAIP2-207ENST00000560562 C8orf89P0DMQ9 161 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms