RNA–Protein interactions for RNA: ENST00000560462.1

HERC1-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 647 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-208ENST00000560462 WNT3P56703 355 aa5.94□□□□□ -1.46
HERC1-208ENST00000560462 DSC2Q02487 901 aa5.94□□□□□ -1.46
HERC1-208ENST00000560462 TEKQ02763 1124 aa5.94□□□□□ -1.46
HERC1-208ENST00000560462 ENPEPQ07075 957 aa5.94□□□□□ -1.46
HERC1-208ENST00000560462 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.94□□□□□ -1.46
HERC1-208ENST00000560462 SLC25A52Q3SY17 297 aa5.94□□□□□ -1.46
HERC1-208ENST00000560462 TOR2AQ5JU69 321 aa5.94□□□□□ -1.46
HERC1-208ENST00000560462 ZNF569Q5MCW4 686 aa5.94□□□□□ -1.46
HERC1-208ENST00000560462 FAM72AQ5TYM5 149 aa5.94□□□□□ -1.46
HERC1-208ENST00000560462 CDKAL1Q5VV42 579 aa5.94□□□□□ -1.46
HERC1-208ENST00000560462 MCTP1Q6DN14 999 aa5.94□□□□□ -1.46
HERC1-208ENST00000560462 FAM72DQ6L9T8 149 aa5.94□□□□□ -1.46
HERC1-208ENST00000560462 AMZ2Q86W34 360 aa5.94□□□□□ -1.46
HERC1-208ENST00000560462 FAM72BQ86X60 149 aa5.94□□□□□ -1.46
HERC1-208ENST00000560462 NDUFAF2Q8N183 169 aa5.94□□□□□ -1.46
HERC1-208ENST00000560462 DNAJC22Q8N4W6 341 aa5.94□□□□□ -1.46
HERC1-208ENST00000560462 RTL3Q8N8U3 475 aaKnown RBP5.94□□□□□ -1.46
HERC1-208ENST00000560462 FAM184AQ8NB25 1140 aa5.94□□□□□ -1.46
HERC1-208ENST00000560462 FAM156AQ8NDB6 213 aa5.94□□□□□ -1.46
HERC1-208ENST00000560462 OR10H5Q8NGA6 315 aa5.94□□□□□ -1.46
HERC1-208ENST00000560462 ZNF418Q8TF45 676 aaPredicted RBP5.94□□□□□ -1.46
HERC1-208ENST00000560462 UBE2FQ969M7 185 aa5.94□□□□□ -1.46
HERC1-208ENST00000560462 NTNG2Q96CW9 530 aa5.94□□□□□ -1.46
HERC1-208ENST00000560462 CAPZA3Q96KX2 299 aa5.94□□□□□ -1.46
HERC1-208ENST00000560462 CFAP57Q96MR6 1250 aa5.94□□□□□ -1.46
HERC1-208ENST00000560462 WFIKKN1Q96NZ8 548 aa5.94□□□□□ -1.46
HERC1-208ENST00000560462 LRRC27Q9C0I9 530 aa5.94□□□□□ -1.46
HERC1-208ENST00000560462 THAP2Q9H0W7 228 aa5.94□□□□□ -1.46
HERC1-208ENST00000560462 MMP27Q9H306 513 aa5.94□□□□□ -1.46
HERC1-208ENST00000560462 UPF2Q9HAU5 1272 aaKnown RBP5.94□□□□□ -1.46
HERC1-208ENST00000560462 SH2D2AQ9NP31 389 aa5.94□□□□□ -1.46
HERC1-208ENST00000560462 SLC39A2Q9NP94 309 aa5.94□□□□□ -1.46
HERC1-208ENST00000560462 TRMT1Q9NXH9 659 aaKnown RBP5.94□□□□□ -1.46
HERC1-208ENST00000560462 EURLQ9NYK6 297 aa5.94□□□□□ -1.46
HERC1-208ENST00000560462 DTLQ9NZJ0 730 aa5.94□□□□□ -1.46
HERC1-208ENST00000560462 KLHL21Q9UJP4 597 aa5.94□□□□□ -1.46
HERC1-208ENST00000560462 ACSL5Q9ULC5 683 aa5.94□□□□□ -1.46
HERC1-208ENST00000560462 PPIL1Q9Y3C6 166 aa5.94□□□□□ -1.46
HERC1-208ENST00000560462 LIPGQ9Y5X9 500 aa5.94□□□□□ -1.46
HERC1-208ENST00000560462 COLEC10Q9Y6Z7 277 aa5.94□□□□□ -1.46
HERC1-208ENST00000560462 ZNF407Q9C0G0 2248 aa5.94□□□□□ -1.46
HERC1-208ENST00000560462 MALRD1Q5VYJ5 2156 aa5.93□□□□□ -1.46
HERC1-208ENST00000560462 IGLV3-12A0A075B6K2 115 aa5.93□□□□□ -1.46
HERC1-208ENST00000560462 RBMY1BA6NDE4 496 aaKnown RBP5.93□□□□□ -1.46
HERC1-208ENST00000560462 RBMY1EA6NEQ0 496 aaKnown RBP5.93□□□□□ -1.46
HERC1-208ENST00000560462 HS3ST1O14792 307 aa5.93□□□□□ -1.46
HERC1-208ENST00000560462 MTX2O75431 263 aa5.93□□□□□ -1.46
HERC1-208ENST00000560462 ERN1O75460 977 aaKnown RBP5.93□□□□□ -1.46
HERC1-208ENST00000560462 PGLSO95336 258 aa5.93□□□□□ -1.46
HERC1-208ENST00000560462 IGHG3P01860 377 aa5.93□□□□□ -1.46
HERC1-208ENST00000560462 RBMY1DP0C7P1 496 aaKnown RBP5.93□□□□□ -1.46
HERC1-208ENST00000560462 SLC25A16P16260 332 aa5.93□□□□□ -1.46
HERC1-208ENST00000560462 DPP4P27487 766 aa5.93□□□□□ -1.46
HERC1-208ENST00000560462 LOXP28300 417 aaPredicted RBP5.93□□□□□ -1.46
HERC1-208ENST00000560462 TIMP3P35625 211 aa5.93□□□□□ -1.46
HERC1-208ENST00000560462 GGT5P36269 586 aa5.93□□□□□ -1.46
HERC1-208ENST00000560462 GMPRP36959 345 aa5.93□□□□□ -1.46
HERC1-208ENST00000560462 MAN2A2P49641 1150 aa5.93□□□□□ -1.46
HERC1-208ENST00000560462 SLC16A1P53985 500 aa5.93□□□□□ -1.46
HERC1-208ENST00000560462 ADARP55265 1226 aaKnown RBP5.93□□□□□ -1.46
HERC1-208ENST00000560462 TAS2R50P59544 299 aa5.93□□□□□ -1.46
HERC1-208ENST00000560462 SLC6A3Q01959 620 aa5.93□□□□□ -1.46
HERC1-208ENST00000560462 PLGLB1Q02325 96 aa5.93□□□□□ -1.46
HERC1-208ENST00000560462 TRAF2Q12933 501 aa5.93□□□□□ -1.46
HERC1-208ENST00000560462 GRM7Q14831 915 aa5.93□□□□□ -1.46
HERC1-208ENST00000560462 MEA1Q16626 185 aa5.93□□□□□ -1.46
HERC1-208ENST00000560462 ARMC12Q5T9G4 340 aa5.93□□□□□ -1.46
HERC1-208ENST00000560462 MBNL2Q5VZF2 373 aaKnown RBP5.93□□□□□ -1.46
HERC1-208ENST00000560462 C11orf87Q6NUJ2 197 aa5.93□□□□□ -1.46
HERC1-208ENST00000560462 DARS2Q6PI48 645 aaKnown RBP5.93□□□□□ -1.46
HERC1-208ENST00000560462 WDR59Q6PJI9 974 aa5.93□□□□□ -1.46
HERC1-208ENST00000560462 CLEC2AQ6UVW9 174 aa5.93□□□□□ -1.46
HERC1-208ENST00000560462 TMEM205Q6UW68 189 aa5.93□□□□□ -1.46
HERC1-208ENST00000560462 ZNF704Q6ZNC4 412 aaPredicted RBP5.93□□□□□ -1.46
HERC1-208ENST00000560462 FAM83HQ6ZRV2 1179 aaPredicted RBP5.93□□□□□ -1.46
HERC1-208ENST00000560462 RGS9BPQ6ZS82 235 aa5.93□□□□□ -1.46
HERC1-208ENST00000560462 TRILQ7L0X0 811 aa5.93□□□□□ -1.46
HERC1-208ENST00000560462 MILR1Q7Z6M3 343 aa5.93□□□□□ -1.46
HERC1-208ENST00000560462 LUZP2Q86TE4 346 aa5.93□□□□□ -1.46
HERC1-208ENST00000560462 LACC1Q8IV20 430 aa5.93□□□□□ -1.46
HERC1-208ENST00000560462 GRAMD1CQ8IYS0 662 aa5.93□□□□□ -1.46
HERC1-208ENST00000560462 KRT78Q8N1N4 520 aa5.93□□□□□ -1.46
HERC1-208ENST00000560462 FBXW8Q8N3Y1 598 aa5.93□□□□□ -1.46
HERC1-208ENST00000560462 BEND7Q8N7W2 519 aaPredicted RBP5.93□□□□□ -1.46
HERC1-208ENST00000560462 ACVR1CQ8NER5 493 aa5.93□□□□□ -1.46
HERC1-208ENST00000560462 ZNF397Q8NF99 534 aaPredicted RBP5.93□□□□□ -1.46
HERC1-208ENST00000560462 PHOSPHO1Q8TCT1 267 aa5.93□□□□□ -1.46
HERC1-208ENST00000560462 FAF2Q96CS3 445 aa5.93□□□□□ -1.46
HERC1-208ENST00000560462 MSI2Q96DH6 328 aaKnown RBP5.93□□□□□ -1.46
HERC1-208ENST00000560462 SMIM14Q96QK8 99 aa5.93□□□□□ -1.46
HERC1-208ENST00000560462 CPXM1Q96SM3 734 aa5.93□□□□□ -1.46
HERC1-208ENST00000560462 MED18Q9BUE0 208 aa5.93□□□□□ -1.46
HERC1-208ENST00000560462 PANK2Q9BZ23 570 aa5.93□□□□□ -1.46
HERC1-208ENST00000560462 WWP1Q9H0M0 922 aa5.93□□□□□ -1.46
HERC1-208ENST00000560462 TRIM45Q9H8W5 580 aaPredicted RBP5.93□□□□□ -1.46
HERC1-208ENST00000560462 C14orf105Q9NVL8 296 aa5.93□□□□□ -1.46
HERC1-208ENST00000560462 IKZF3Q9UKT9 509 aa5.93□□□□□ -1.46
HERC1-208ENST00000560462 PCDHA7Q9UN72 937 aa5.93□□□□□ -1.46
HERC1-208ENST00000560462 LIPT1Q9Y234 373 aa5.93□□□□□ -1.46
HERC1-208ENST00000560462 UBR4Q5T4S7 5183 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms