RNA–Protein interactions for RNA: ENST00000555806.5

NEDD1-208, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-208ENST00000555806 SKP1P63208 163 aa17.4■□□□□ 0.38
NEDD1-208ENST00000555806 MFAP5Q13361 173 aa17.4■□□□□ 0.38
NEDD1-208ENST00000555806 PCOLCEQ15113 449 aa17.4■□□□□ 0.38
NEDD1-208ENST00000555806 RBBP5Q15291 538 aaKnown RBP17.4■□□□□ 0.38
NEDD1-208ENST00000555806 TGFBIQ15582 683 aa17.4■□□□□ 0.38
NEDD1-208ENST00000555806 C18orf21Q32NC0 220 aaPredicted RBP17.4■□□□□ 0.38
NEDD1-208ENST00000555806 GRTP1Q5TC63 336 aa17.4■□□□□ 0.38
NEDD1-208ENST00000555806 IGFL2Q6UWQ7 119 aa17.4■□□□□ 0.38
NEDD1-208ENST00000555806 SHISA5Q8N114 240 aa17.4■□□□□ 0.38
NEDD1-208ENST00000555806 FAM26EQ8N5C1 309 aa17.4■□□□□ 0.38
NEDD1-208ENST00000555806 DNAJB14Q8TBM8 379 aa17.4■□□□□ 0.38
NEDD1-208ENST00000555806 BRIX1Q8TDN6 353 aaKnown RBP17.4■□□□□ 0.38
NEDD1-208ENST00000555806 RHBDF1Q96CC6 855 aa17.4■□□□□ 0.38
NEDD1-208ENST00000555806 SNRNP40Q96DI7 357 aaKnown RBP17.4■□□□□ 0.38
NEDD1-208ENST00000555806 C19orf60Q96EN9 201 aa17.4■□□□□ 0.38
NEDD1-208ENST00000555806 PEX11GQ96HA9 241 aa17.4■□□□□ 0.38
NEDD1-208ENST00000555806 RBCK1Q9BYM8 510 aa17.4■□□□□ 0.38
NEDD1-208ENST00000555806 ZNF700Q9H0M5 742 aa17.4■□□□□ 0.38
NEDD1-208ENST00000555806 LRRC4CQ9HCJ2 640 aa17.4■□□□□ 0.38
NEDD1-208ENST00000555806 WWOXQ9NZC7 414 aa17.4■□□□□ 0.38
NEDD1-208ENST00000555806 PTGFRNQ9P2B2 879 aa17.4■□□□□ 0.38
NEDD1-208ENST00000555806 C19orf25Q9UFG5 118 aaPredicted RBP17.4■□□□□ 0.38
NEDD1-208ENST00000555806 WFS1O76024 890 aa17.39■□□□□ 0.37
NEDD1-208ENST00000555806 WISP3O95389 354 aaPredicted RBP17.39■□□□□ 0.37
NEDD1-208ENST00000555806 C1QAP02745 245 aa17.39■□□□□ 0.37
NEDD1-208ENST00000555806 CELA2AP08217 269 aa17.39■□□□□ 0.37
NEDD1-208ENST00000555806 ZNF888P0CJ79 500 aaPredicted RBP17.39■□□□□ 0.37
NEDD1-208ENST00000555806 ALOX12P18054 663 aa17.39■□□□□ 0.37
NEDD1-208ENST00000555806 AHRP35869 848 aa17.39■□□□□ 0.37
NEDD1-208ENST00000555806 GDF5P43026 501 aa17.39■□□□□ 0.37
NEDD1-208ENST00000555806 RAB10P61026 200 aa17.39■□□□□ 0.37
NEDD1-208ENST00000555806 ATP6V0D1P61421 351 aa17.39■□□□□ 0.37
NEDD1-208ENST00000555806 SLMAPQ14BN4 828 aa17.39■□□□□ 0.37
NEDD1-208ENST00000555806 DEFB134Q4QY38 66 aa17.39■□□□□ 0.37
NEDD1-208ENST00000555806 CRB2Q5IJ48 1285 aa17.39■□□□□ 0.37
NEDD1-208ENST00000555806 LANCL3Q6ZV70 420 aa17.39■□□□□ 0.37
NEDD1-208ENST00000555806 ABHD13Q7L211 337 aa17.39■□□□□ 0.37
NEDD1-208ENST00000555806 GPSM1Q86YR5 675 aa17.39■□□□□ 0.37
NEDD1-208ENST00000555806 TCAIMQ8N3R3 496 aa17.39■□□□□ 0.37
NEDD1-208ENST00000555806 SIRT6Q8N6T7 355 aa17.39■□□□□ 0.37
NEDD1-208ENST00000555806 OR5T3Q8NGG3 340 aa17.39■□□□□ 0.37
NEDD1-208ENST00000555806 NT5CQ8TCD5 201 aa17.39■□□□□ 0.37
NEDD1-208ENST00000555806 FBF1Q8TES7 1133 aa17.39■□□□□ 0.37
NEDD1-208ENST00000555806 ZNF592Q92610 1267 aa17.39■□□□□ 0.37
NEDD1-208ENST00000555806 CYTH2Q99418 400 aa17.39■□□□□ 0.37
NEDD1-208ENST00000555806 LRRC1Q9BTT6 524 aa17.39■□□□□ 0.37
NEDD1-208ENST00000555806 TUBB6Q9BUF5 446 aa17.39■□□□□ 0.37
NEDD1-208ENST00000555806 ASF1BQ9NVP2 202 aa17.39■□□□□ 0.37
NEDD1-208ENST00000555806 PCDHGA10Q9Y5H3 936 aa17.39■□□□□ 0.37
NEDD1-208ENST00000555806 FLNCQ14315 2725 aa17.39■□□□□ 0.37
NEDD1-208ENST00000555806 SHANK1Q9Y566 2161 aa17.38■□□□□ 0.37
NEDD1-208ENST00000555806 IGHV3-20A0A0C4DH32 117 aa17.38■□□□□ 0.37
NEDD1-208ENST00000555806 OR2W5A6NFC9 320 aa17.38■□□□□ 0.37
NEDD1-208ENST00000555806 TCP11X1B4DZS4 312 aa17.38■□□□□ 0.37
NEDD1-208ENST00000555806 GALR3O60755 368 aaPredicted RBP17.38■□□□□ 0.37
NEDD1-208ENST00000555806 H2AFYO75367 372 aaKnown RBP17.38■□□□□ 0.37
NEDD1-208ENST00000555806 CDC123O75794 336 aaPredicted RBP17.38■□□□□ 0.37
NEDD1-208ENST00000555806 FAM155BO75949 473 aa17.38■□□□□ 0.37
NEDD1-208ENST00000555806 SEC24DO94855 1032 aaPredicted RBP17.38■□□□□ 0.37
NEDD1-208ENST00000555806 CYC1P08574 325 aa17.38■□□□□ 0.37
NEDD1-208ENST00000555806 CD1DP15813 335 aa17.38■□□□□ 0.37
NEDD1-208ENST00000555806 GNAZP19086 355 aa17.38■□□□□ 0.37
NEDD1-208ENST00000555806 HNF4AP41235 474 aa17.38■□□□□ 0.37
NEDD1-208ENST00000555806 SLC6A12P48065 614 aa17.38■□□□□ 0.37
NEDD1-208ENST00000555806 AP2B1P63010 937 aa17.38■□□□□ 0.37
NEDD1-208ENST00000555806 OLR1P78380 273 aa17.38■□□□□ 0.37
NEDD1-208ENST00000555806 ARG2P78540 354 aa17.38■□□□□ 0.37
NEDD1-208ENST00000555806 EFTUD2Q15029 972 aaKnown RBP eCLIP17.38■□□□□ 0.373e-6■■■■■ 41.9
NEDD1-208ENST00000555806 WHAMMP3Q1A5X7 153 aa17.38■□□□□ 0.37
NEDD1-208ENST00000555806 RIPOR1Q6ZS17 1223 aa17.38■□□□□ 0.37
NEDD1-208ENST00000555806 RAPH1Q70E73 1250 aa17.38■□□□□ 0.37
NEDD1-208ENST00000555806 CPEB2Q7Z5Q1 589 aaKnown RBP17.38■□□□□ 0.37
NEDD1-208ENST00000555806 AFAP1L2Q8N4X5 818 aa17.38■□□□□ 0.37
NEDD1-208ENST00000555806 ANKRD53Q8N9V6 530 aa17.38■□□□□ 0.37
NEDD1-208ENST00000555806 TRPV3Q8NET8 790 aa17.38■□□□□ 0.37
NEDD1-208ENST00000555806 EXT2Q93063 718 aa17.38■□□□□ 0.37
NEDD1-208ENST00000555806 LMF1Q96S06 567 aa17.38■□□□□ 0.37
NEDD1-208ENST00000555806 COPG1Q9Y678 874 aaKnown RBP17.38■□□□□ 0.37
NEDD1-208ENST00000555806 CLEC18AA5D8T8 446 aa17.37■□□□□ 0.37
NEDD1-208ENST00000555806 URADA6NGE7 173 aa17.37■□□□□ 0.37
NEDD1-208ENST00000555806 B3GALT4O96024 378 aa17.37■□□□□ 0.37
NEDD1-208ENST00000555806 S100BP04271 92 aaPredicted RBP17.37■□□□□ 0.37
NEDD1-208ENST00000555806 C1GALT1C1LP0DN25 315 aa17.37■□□□□ 0.37
NEDD1-208ENST00000555806 ITGAMP11215 1152 aa17.37■□□□□ 0.37
NEDD1-208ENST00000555806 ICAM2P13598 275 aa17.37■□□□□ 0.37
NEDD1-208ENST00000555806 IL10P22301 178 aa17.37■□□□□ 0.37
NEDD1-208ENST00000555806 RAB8AP61006 207 aa17.37■□□□□ 0.37
NEDD1-208ENST00000555806 GUCY2DQ02846 1103 aa17.37■□□□□ 0.37
NEDD1-208ENST00000555806 CDC16Q13042 620 aa17.37■□□□□ 0.37
NEDD1-208ENST00000555806 MRPL49Q13405 166 aaKnown RBP17.37■□□□□ 0.37
NEDD1-208ENST00000555806 NAB1Q13506 487 aa17.37■□□□□ 0.37
NEDD1-208ENST00000555806 SLBPQ14493 270 aaKnown RBP eCLIP17.37■□□□□ 0.37
NEDD1-208ENST00000555806 ZNF169Q14929 603 aaPredicted RBP17.37■□□□□ 0.37
NEDD1-208ENST00000555806 NR6A1Q15406 480 aa17.37■□□□□ 0.37
NEDD1-208ENST00000555806 OR4D1Q15615 310 aa17.37■□□□□ 0.37
NEDD1-208ENST00000555806 ZKSCAN8Q15776 578 aaPredicted RBP17.37■□□□□ 0.37
NEDD1-208ENST00000555806 FBXO48Q5FWF7 155 aa17.37■□□□□ 0.37
NEDD1-208ENST00000555806 FHL5Q5TD97 284 aa17.37■□□□□ 0.37
NEDD1-208ENST00000555806 NIPAL1Q6NVV3 410 aa17.37■□□□□ 0.37
NEDD1-208ENST00000555806 CLEC18BQ6UXF7 455 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms