RNA–Protein interactions for RNA: ENST00000554336.5

TUBB3-205, Transcript of tubulin beta 3 class III, humanhuman

TSL 3 BASIC

Gene TUBB3, Length 903 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-205ENST00000554336 ZRSR2Q15696 482 aaKnown RBP16.41■□□□□ 0.22
TUBB3-205ENST00000554336 CPSF6Q16630 551 aaKnown RBP eCLIP16.41■□□□□ 0.22
TUBB3-205ENST00000554336 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.41■□□□□ 0.22
TUBB3-205ENST00000554336 GPRIN3Q6ZVF9 776 aa16.41■□□□□ 0.22
TUBB3-205ENST00000554336 PPP1R3BQ86XI6 285 aa16.41■□□□□ 0.22
TUBB3-205ENST00000554336 ZNF655Q8N720 491 aaPredicted RBP16.41■□□□□ 0.22
TUBB3-205ENST00000554336 CSNK1A1LQ8N752 337 aa16.41■□□□□ 0.22
TUBB3-205ENST00000554336 OR7G3Q8NG95 312 aa16.41■□□□□ 0.22
TUBB3-205ENST00000554336 SNRNP27Q8WVK2 155 aaKnown RBP16.41■□□□□ 0.22
TUBB3-205ENST00000554336 TTC9Q92623 222 aa16.41■□□□□ 0.22
TUBB3-205ENST00000554336 ATP6V1E2Q96A05 226 aa16.41■□□□□ 0.22
TUBB3-205ENST00000554336 THAP11Q96EK4 314 aa16.41■□□□□ 0.22
TUBB3-205ENST00000554336 SPRY4Q9C004 299 aa16.41■□□□□ 0.22
TUBB3-205ENST00000554336 C20orf27Q9GZN8 174 aa16.41■□□□□ 0.22
TUBB3-205ENST00000554336 FANCEQ9HB96 536 aa16.41■□□□□ 0.22
TUBB3-205ENST00000554336 MED4Q9NPJ6 270 aa16.41■□□□□ 0.22
TUBB3-205ENST00000554336 TRPS1Q9UHF7 1281 aa16.41■□□□□ 0.22
TUBB3-205ENST00000554336 ZFP69BQ9UJL9 534 aa16.41■□□□□ 0.22
TUBB3-205ENST00000554336 RUVBL1Q9Y265 456 aaKnown RBP16.41■□□□□ 0.22
TUBB3-205ENST00000554336 AP1M2Q9Y6Q5 423 aa16.41■□□□□ 0.22
TUBB3-205ENST00000554336 SEC16AO15027 2179 aa16.4■□□□□ 0.22
TUBB3-205ENST00000554336 SETXQ7Z333 2677 aaKnown RBP16.4■□□□□ 0.22
TUBB3-205ENST00000554336 H0YIV9 168 aa16.4■□□□□ 0.22
TUBB3-205ENST00000554336 K7ENP7 123 aa16.4■□□□□ 0.22
TUBB3-205ENST00000554336 FFAR3O14843 346 aa16.4■□□□□ 0.22
TUBB3-205ENST00000554336 GPR42O15529 346 aa16.4■□□□□ 0.22
TUBB3-205ENST00000554336 ITM2AO43736 263 aa16.4■□□□□ 0.22
TUBB3-205ENST00000554336 SRPX2O60687 465 aaPredicted RBP16.4■□□□□ 0.22
TUBB3-205ENST00000554336 ESRRBO95718 433 aa16.4■□□□□ 0.22
TUBB3-205ENST00000554336 MLYCDO95822 493 aa16.4■□□□□ 0.22
TUBB3-205ENST00000554336 EIF2S1P05198 315 aaKnown RBP16.4■□□□□ 0.22
TUBB3-205ENST00000554336 AHRP35869 848 aa16.4■□□□□ 0.22
TUBB3-205ENST00000554336 ARL1P40616 181 aaPredicted RBP16.4■□□□□ 0.22
TUBB3-205ENST00000554336 HTR6P50406 440 aa16.4■□□□□ 0.22
TUBB3-205ENST00000554336 RCN2Q14257 317 aa16.4■□□□□ 0.22
TUBB3-205ENST00000554336 ARL13AQ5H913 290 aaPredicted RBP16.4■□□□□ 0.22
TUBB3-205ENST00000554336 PAGE2BQ5JRK9 111 aa16.4■□□□□ 0.22
TUBB3-205ENST00000554336 CFAP157Q5JU67 520 aa16.4■□□□□ 0.22
TUBB3-205ENST00000554336 DCAF12Q5T6F0 453 aa16.4■□□□□ 0.22
TUBB3-205ENST00000554336 MED27Q6P2C8 311 aa16.4■□□□□ 0.22
TUBB3-205ENST00000554336 INO80CQ6PI98 192 aaPredicted RBP16.4■□□□□ 0.22
TUBB3-205ENST00000554336 CEACAM20Q6UY09 585 aa16.4■□□□□ 0.22
TUBB3-205ENST00000554336 MILR1Q7Z6M3 343 aa16.4■□□□□ 0.22
TUBB3-205ENST00000554336 ASPGQ86U10 573 aa16.4■□□□□ 0.22
TUBB3-205ENST00000554336 KRT78Q8N1N4 520 aa16.4■□□□□ 0.22
TUBB3-205ENST00000554336 CDYL2Q8N8U2 506 aa16.4■□□□□ 0.22
TUBB3-205ENST00000554336 KCT2Q8NC54 265 aa16.4■□□□□ 0.22
TUBB3-205ENST00000554336 OR8K5Q8NH50 307 aa16.4■□□□□ 0.22
TUBB3-205ENST00000554336 WDR20Q8TBZ3 569 aa16.4■□□□□ 0.22
TUBB3-205ENST00000554336 ZNF473Q8WTR7 871 aaKnown RBP16.4■□□□□ 0.22
TUBB3-205ENST00000554336 N4BP2L2Q92802 583 aaPredicted RBP16.4■□□□□ 0.22
TUBB3-205ENST00000554336 PITHD1Q9GZP4 211 aaPredicted RBP16.4■□□□□ 0.22
TUBB3-205ENST00000554336 DRC3Q9H069 523 aa16.4■□□□□ 0.22
TUBB3-205ENST00000554336 RHBGQ9H310 441 aa16.4■□□□□ 0.22
TUBB3-205ENST00000554336 MID1IP1Q9NPA3 183 aa16.4■□□□□ 0.22
TUBB3-205ENST00000554336 WDR70Q9NW82 654 aa16.4■□□□□ 0.22
TUBB3-205ENST00000554336 SCN3AQ9NY46 2000 aa16.4■□□□□ 0.22
TUBB3-205ENST00000554336 TMEM233B4DJY2 109 aa16.39■□□□□ 0.21
TUBB3-205ENST00000554336 NDUFS4O43181 175 aa16.39■□□□□ 0.21
TUBB3-205ENST00000554336 ZNF749O43361 778 aa16.39■□□□□ 0.21
TUBB3-205ENST00000554336 H2AFYO75367 372 aaKnown RBP16.39■□□□□ 0.21
TUBB3-205ENST00000554336 SCRG1O75711 98 aa16.39■□□□□ 0.21
TUBB3-205ENST00000554336 KIAA0754O94854 1291 aa16.39■□□□□ 0.21
TUBB3-205ENST00000554336 DLGAP3O95886 979 aa16.39■□□□□ 0.21
TUBB3-205ENST00000554336 SERPINE1P05121 402 aa16.39■□□□□ 0.21
TUBB3-205ENST00000554336 CAPN1P07384 714 aa16.39■□□□□ 0.21
TUBB3-205ENST00000554336 ITGAXP20702 1163 aa16.39■□□□□ 0.21
TUBB3-205ENST00000554336 CXCR2P25025 360 aa16.39■□□□□ 0.21
TUBB3-205ENST00000554336 SLC5A2P31639 672 aa16.39■□□□□ 0.21
TUBB3-205ENST00000554336 HNRNPH1P31943 449 aaKnown RBP16.39■□□□□ 0.21
TUBB3-205ENST00000554336 PKNOX1P55347 436 aa16.39■□□□□ 0.21
TUBB3-205ENST00000554336 BST1Q10588 318 aa16.39■□□□□ 0.21
TUBB3-205ENST00000554336 ASPHQ12797 758 aa16.39■□□□□ 0.21
TUBB3-205ENST00000554336 LAPTM5Q13571 262 aa16.39■□□□□ 0.21
TUBB3-205ENST00000554336 TCTE1Q5JU00 501 aa16.39■□□□□ 0.21
TUBB3-205ENST00000554336 CUZD1Q86UP6 607 aa16.39■□□□□ 0.21
TUBB3-205ENST00000554336 TMEM126BQ8IUX1 230 aa16.39■□□□□ 0.21
TUBB3-205ENST00000554336 RERGQ96A58 199 aaPredicted RBP16.39■□□□□ 0.21
TUBB3-205ENST00000554336 CNDP1Q96KN2 507 aa16.39■□□□□ 0.21
TUBB3-205ENST00000554336 SORT1Q99523 831 aa16.39■□□□□ 0.21
TUBB3-205ENST00000554336 SLC6A16Q9GZN6 736 aa16.39■□□□□ 0.21
TUBB3-205ENST00000554336 FARSBQ9NSD9 589 aaKnown RBP16.39■□□□□ 0.21
TUBB3-205ENST00000554336 SERTAD3Q9UJW9 196 aa16.39■□□□□ 0.21
TUBB3-205ENST00000554336 TSC22D4Q9Y3Q8 395 aa16.39■□□□□ 0.21
TUBB3-205ENST00000554336 TIMM22Q9Y584 194 aa16.39■□□□□ 0.21
TUBB3-205ENST00000554336 PCDHB3Q9Y5E6 796 aa16.39■□□□□ 0.21
TUBB3-205ENST00000554336 PCDHGA7Q9Y5G6 932 aa16.39■□□□□ 0.21
TUBB3-205ENST00000554336 TENM4Q6N022 2769 aa16.39■□□□□ 0.21
TUBB3-205ENST00000554336 COL6A6A6NMZ7 2263 aa16.38■□□□□ 0.21
TUBB3-205ENST00000554336 NVLO15381 856 aaKnown RBP16.38■□□□□ 0.21
TUBB3-205ENST00000554336 ETHE1O95571 254 aa16.38■□□□□ 0.21
TUBB3-205ENST00000554336 NTRK1P04629 796 aa16.38■□□□□ 0.21
TUBB3-205ENST00000554336 PCNAP12004 261 aa16.38■□□□□ 0.21
TUBB3-205ENST00000554336 NEK2P51955 445 aa16.38■□□□□ 0.21
TUBB3-205ENST00000554336 NAA20P61599 178 aa16.38■□□□□ 0.21
TUBB3-205ENST00000554336 GPS2Q13227 327 aa16.38■□□□□ 0.21
TUBB3-205ENST00000554336 DDX39BQ13838 428 aaKnown RBP16.38■□□□□ 0.21
TUBB3-205ENST00000554336 ZNF385CQ66K41 422 aaPredicted RBP16.38■□□□□ 0.21
TUBB3-205ENST00000554336 CLEC6AQ6EIG7 209 aa16.38■□□□□ 0.21
TUBB3-205ENST00000554336 TMEM214Q6NUQ4 689 aaKnown RBP16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms