RNA–Protein interactions for RNA: ENST00000553622.5

CHD8-204, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-204ENST00000553622 ZNF768Q9H5H4 540 aaKnown RBP9.33□□□□□ -0.92
CHD8-204ENST00000553622 AKTIPQ9H8T0 292 aa9.33□□□□□ -0.92
CHD8-204ENST00000553622 SYNPO2LQ9H987 977 aa9.33□□□□□ -0.92
CHD8-204ENST00000553622 BRF2Q9HAW0 419 aa9.33□□□□□ -0.92
CHD8-204ENST00000553622 KCNK13Q9HB14 408 aa9.33□□□□□ -0.92
CHD8-204ENST00000553622 FANCEQ9HB96 536 aa9.33□□□□□ -0.92
CHD8-204ENST00000553622 LRTM1Q9HBL6 345 aa9.33□□□□□ -0.92
CHD8-204ENST00000553622 TCF7L2Q9NQB0 619 aa9.33□□□□□ -0.92
CHD8-204ENST00000553622 VPS29Q9UBQ0 182 aa9.33□□□□□ -0.92
CHD8-204ENST00000553622 PILRAQ9UKJ1 303 aa9.33□□□□□ -0.92
CHD8-204ENST00000553622 CDV3Q9UKY7 258 aaKnown RBP9.33□□□□□ -0.92
CHD8-204ENST00000553622 PLCL2Q9UPR0 1127 aa9.33□□□□□ -0.92
CHD8-204ENST00000553622 KLK4Q9Y5K2 254 aa9.33□□□□□ -0.92
CHD8-204ENST00000553622 AP1M2Q9Y6Q5 423 aa9.33□□□□□ -0.92
CHD8-204ENST00000553622 FER1L5A0AVI2 2057 aa9.33□□□□□ -0.92
CHD8-204ENST00000553622 FOXE1O00358 373 aaPredicted RBP9.32□□□□□ -0.92
CHD8-204ENST00000553622 P2RX6O15547 441 aa9.32□□□□□ -0.92
CHD8-204ENST00000553622 ERI3O43414 337 aaKnown RBP9.32□□□□□ -0.92
CHD8-204ENST00000553622 HCRTR1O43613 425 aa9.32□□□□□ -0.92
CHD8-204ENST00000553622 MYO1DO94832 1006 aa9.32□□□□□ -0.92
CHD8-204ENST00000553622 ETHE1O95571 254 aa9.32□□□□□ -0.92
CHD8-204ENST00000553622 FOLR1P15328 257 aa9.32□□□□□ -0.92
CHD8-204ENST00000553622 LBPP18428 481 aa9.32□□□□□ -0.92
CHD8-204ENST00000553622 NELFEP18615 380 aaKnown RBP9.32□□□□□ -0.92
CHD8-204ENST00000553622 NCF2P19878 526 aaPredicted RBP9.32□□□□□ -0.92
CHD8-204ENST00000553622 PTX3P26022 381 aaPredicted RBP9.32□□□□□ -0.92
CHD8-204ENST00000553622 GSTM2P28161 218 aa9.32□□□□□ -0.92
CHD8-204ENST00000553622 HNRNPH1P31943 449 aaKnown RBP9.32□□□□□ -0.92
CHD8-204ENST00000553622 CSTF2P33240 577 aaKnown RBP eCLIP9.32□□□□□ -0.92
CHD8-204ENST00000553622 NOVA1P51513 510 aaKnown RBP9.32□□□□□ -0.92
CHD8-204ENST00000553622 PLA2G16P53816 162 aa9.32□□□□□ -0.92
CHD8-204ENST00000553622 STXBP1P61764 594 aaKnown RBP9.32□□□□□ -0.92
CHD8-204ENST00000553622 SIM1P81133 766 aaPredicted RBP9.32□□□□□ -0.92
CHD8-204ENST00000553622 INSM1Q01101 510 aaPredicted RBP9.32□□□□□ -0.92
CHD8-204ENST00000553622 ZNF33BQ06732 778 aa9.32□□□□□ -0.92
CHD8-204ENST00000553622 TGM3Q08188 693 aa9.32□□□□□ -0.92
CHD8-204ENST00000553622 ACSM2AQ08AH3 577 aa9.32□□□□□ -0.92
CHD8-204ENST00000553622 HKDC1Q2TB90 917 aa9.32□□□□□ -0.92
CHD8-204ENST00000553622 LSM12Q3MHD2 195 aaKnown RBP9.32□□□□□ -0.92
CHD8-204ENST00000553622 XKR7Q5GH72 579 aa9.32□□□□□ -0.92
CHD8-204ENST00000553622 WASHC2DQ5SRD0 308 aa9.32□□□□□ -0.92
CHD8-204ENST00000553622 KHDRBS2Q5VWX1 349 aaKnown RBP9.32□□□□□ -0.92
CHD8-204ENST00000553622 ACSM2BQ68CK6 577 aa9.32□□□□□ -0.92
CHD8-204ENST00000553622 CHSY3Q70JA7 882 aa9.32□□□□□ -0.92
CHD8-204ENST00000553622 TRIM46Q7Z4K8 759 aa9.32□□□□□ -0.92
CHD8-204ENST00000553622 VN1R4Q7Z5H5 301 aa9.32□□□□□ -0.92
CHD8-204ENST00000553622 ALYREFQ86V81 257 aaKnown RBP9.32□□□□□ -0.92
CHD8-204ENST00000553622 KMT5CQ86Y97 462 aa9.32□□□□□ -0.92
CHD8-204ENST00000553622 DNAJC22Q8N4W6 341 aa9.32□□□□□ -0.92
CHD8-204ENST00000553622 ANKS4BQ8N8V4 417 aa9.32□□□□□ -0.92
CHD8-204ENST00000553622 FNDC5Q8NAU1 212 aa9.32□□□□□ -0.92
CHD8-204ENST00000553622 KCT2Q8NC54 265 aa9.32□□□□□ -0.92
CHD8-204ENST00000553622 CAMKVQ8NCB2 501 aa9.32□□□□□ -0.92
CHD8-204ENST00000553622 CDC26Q8NHZ8 85 aa9.32□□□□□ -0.92
CHD8-204ENST00000553622 CREB3L4Q8TEY5 395 aa9.32□□□□□ -0.92
CHD8-204ENST00000553622 RNF31Q96EP0 1072 aa9.32□□□□□ -0.92
CHD8-204ENST00000553622 APIPQ96GX9 242 aa9.32□□□□□ -0.92
CHD8-204ENST00000553622 SEC16BQ96JE7 1060 aa9.32□□□□□ -0.92
CHD8-204ENST00000553622 TMEM74Q96NL1 305 aa9.32□□□□□ -0.92
CHD8-204ENST00000553622 CATSPER2Q96P56 530 aa9.32□□□□□ -0.92
CHD8-204ENST00000553622 OR2A5Q96R48 311 aa9.32□□□□□ -0.92
CHD8-204ENST00000553622 MS4A8Q9BY19 250 aa9.32□□□□□ -0.92
CHD8-204ENST00000553622 MRPL1Q9BYD6 325 aaKnown RBP9.32□□□□□ -0.92
CHD8-204ENST00000553622 REXO4Q9GZR2 422 aaKnown RBP9.32□□□□□ -0.92
CHD8-204ENST00000553622 KLHL31Q9H511 634 aa9.32□□□□□ -0.92
CHD8-204ENST00000553622 C1orf109Q9NX04 203 aa9.32□□□□□ -0.92
CHD8-204ENST00000553622 PSD3Q9NYI0 1048 aa9.32□□□□□ -0.92
CHD8-204ENST00000553622 AHSPQ9NZD4 102 aa9.32□□□□□ -0.92
CHD8-204ENST00000553622 AKAP7Q9P0M2 348 aaPredicted RBP9.32□□□□□ -0.92
CHD8-204ENST00000553622 HEY2Q9UBP5 337 aa9.32□□□□□ -0.92
CHD8-204ENST00000553622 ARL2BPQ9Y2Y0 163 aa9.32□□□□□ -0.92
CHD8-204ENST00000553622 POLR3HQ9Y535 204 aaPredicted RBP9.32□□□□□ -0.92
CHD8-204ENST00000553622 GVINP1Q7Z2Y8 2422 aa9.32□□□□□ -0.92
CHD8-204ENST00000553622 ZNF292O60281 2723 aa9.32□□□□□ -0.92
CHD8-204ENST00000553622 NUP214P35658 2090 aaPredicted RBP9.32□□□□□ -0.92
CHD8-204ENST00000553622 GNG14A0A1W2PPG7 69 aa9.31□□□□□ -0.92
CHD8-204ENST00000553622 ARHGAP10A1A4S6 786 aa9.31□□□□□ -0.92
CHD8-204ENST00000553622 LRIT2A6NDA9 550 aa9.31□□□□□ -0.92
CHD8-204ENST00000553622 EFCAB7A8K855 629 aa9.31□□□□□ -0.92
CHD8-204ENST00000553622 RTCAO00442 366 aaKnown RBP9.31□□□□□ -0.92
CHD8-204ENST00000553622 LSM1O15116 133 aaKnown RBP9.31□□□□□ -0.92
CHD8-204ENST00000553622 TOX3O15405 576 aaPredicted RBP9.31□□□□□ -0.92
CHD8-204ENST00000553622 CSO75390 466 aaKnown RBP9.31□□□□□ -0.92
CHD8-204ENST00000553622 OR2B3O76000 313 aa9.31□□□□□ -0.92
CHD8-204ENST00000553622 RSL1D1O76021 490 aaKnown RBP9.31□□□□□ -0.92
CHD8-204ENST00000553622 CTSBP07858 339 aa9.31□□□□□ -0.92
CHD8-204ENST00000553622 SERPINA6P08185 405 aa9.31□□□□□ -0.92
CHD8-204ENST00000553622 ANKRD34CP0C6C1 535 aa9.31□□□□□ -0.92
CHD8-204ENST00000553622 FTH1P19P0C7X4 201 aa9.31□□□□□ -0.92
CHD8-204ENST00000553622 ZNF888P0CJ79 500 aaPredicted RBP9.31□□□□□ -0.92
CHD8-204ENST00000553622 SSR2P43308 183 aa9.31□□□□□ -0.92
CHD8-204ENST00000553622 NME5P56597 212 aa9.31□□□□□ -0.92
CHD8-204ENST00000553622 RAB8AP61006 207 aa9.31□□□□□ -0.92
CHD8-204ENST00000553622 RELAQ04206 551 aa9.31□□□□□ -0.92
CHD8-204ENST00000553622 TUBB3Q13509 450 aa9.31□□□□□ -0.92
CHD8-204ENST00000553622 TRA2AQ13595 282 aaKnown RBP eCLIP9.31□□□□□ -0.92
CHD8-204ENST00000553622 PWP1Q13610 501 aa9.31□□□□□ -0.92
CHD8-204ENST00000553622 RPS6KA2Q15349 733 aa9.31□□□□□ -0.92
CHD8-204ENST00000553622 TMEM35AQ53FP2 167 aa9.31□□□□□ -0.92
CHD8-204ENST00000553622 SPIN4Q56A73 249 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms