RNA–Protein interactions for RNA: ENST00000550150.1

SMARCC2-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 2

Gene SMARCC2, Length 3,244 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-208ENST00000550150 LAMP1P11279 417 aa10.37□□□□□ -0.75
SMARCC2-208ENST00000550150 CORO1AP31146 461 aaKnown RBP10.37□□□□□ -0.75
SMARCC2-208ENST00000550150 PIK3CBP42338 1070 aa10.37□□□□□ -0.75
SMARCC2-208ENST00000550150 RGS6P49758 472 aa10.37□□□□□ -0.75
SMARCC2-208ENST00000550150 TUBA1BP68363 451 aa10.37□□□□□ -0.75
SMARCC2-208ENST00000550150 CHRNA6Q15825 494 aa10.37□□□□□ -0.75
SMARCC2-208ENST00000550150 HKDC1Q2TB90 917 aa10.37□□□□□ -0.75
SMARCC2-208ENST00000550150 AGAP6Q5VW22 663 aa10.37□□□□□ -0.75
SMARCC2-208ENST00000550150 PNCKQ6P2M8 343 aa10.37□□□□□ -0.75
SMARCC2-208ENST00000550150 NEK5Q6P3R8 708 aa10.37□□□□□ -0.75
SMARCC2-208ENST00000550150 TUBA1AQ71U36 451 aa10.37□□□□□ -0.75
SMARCC2-208ENST00000550150 OTOP2Q7RTS6 562 aa10.37□□□□□ -0.75
SMARCC2-208ENST00000550150 SLC34A3Q8N130 599 aa10.37□□□□□ -0.75
SMARCC2-208ENST00000550150 ASCC1Q8N9N2 400 aaKnown RBP10.37□□□□□ -0.75
SMARCC2-208ENST00000550150 OR4K1Q8NGD4 311 aa10.37□□□□□ -0.75
SMARCC2-208ENST00000550150 IPCEF1Q8WWN9 437 aaPredicted RBP10.37□□□□□ -0.75
SMARCC2-208ENST00000550150 ZNF566Q969W8 418 aa10.37□□□□□ -0.75
SMARCC2-208ENST00000550150 AGAP4Q96P64 663 aa10.37□□□□□ -0.75
SMARCC2-208ENST00000550150 MAGEH1Q9H213 219 aa10.37□□□□□ -0.75
SMARCC2-208ENST00000550150 CXXC1Q9P0U4 656 aaPredicted RBP10.37□□□□□ -0.75
SMARCC2-208ENST00000550150 ACSL6Q9UKU0 697 aa10.37□□□□□ -0.75
SMARCC2-208ENST00000550150 SAP18O00422 153 aaKnown RBP10.37□□□□□ -0.75
SMARCC2-208ENST00000550150 APOL3O95236 402 aa10.37□□□□□ -0.75
SMARCC2-208ENST00000550150 TRBC1P01850 177 aa10.37□□□□□ -0.75
SMARCC2-208ENST00000550150 ATP5C1P36542 298 aaKnown RBP10.37□□□□□ -0.75
SMARCC2-208ENST00000550150 CLDN8P56748 225 aa10.37□□□□□ -0.75
SMARCC2-208ENST00000550150 SLAMF1Q13291 335 aa10.37□□□□□ -0.75
SMARCC2-208ENST00000550150 ADNP2Q6IQ32 1131 aa10.37□□□□□ -0.75
SMARCC2-208ENST00000550150 NPAS4Q8IUM7 802 aa10.37□□□□□ -0.75
SMARCC2-208ENST00000550150 RBFAQ8N0V3 343 aa10.37□□□□□ -0.75
SMARCC2-208ENST00000550150 LGI4Q8N135 537 aa10.37□□□□□ -0.75
SMARCC2-208ENST00000550150 GPR151Q8TDV0 419 aa10.37□□□□□ -0.75
SMARCC2-208ENST00000550150 TADA1Q96BN2 335 aa10.37□□□□□ -0.75
SMARCC2-208ENST00000550150 FYTTD1Q96QD9 318 aaKnown RBP10.37□□□□□ -0.75
SMARCC2-208ENST00000550150 PHOX2BQ99453 314 aa10.37□□□□□ -0.75
SMARCC2-208ENST00000550150 MOV10Q9HCE1 1003 aaKnown RBP10.37□□□□□ -0.75
SMARCC2-208ENST00000550150 NUFIP1Q9UHK0 495 aaKnown RBP10.37□□□□□ -0.75
SMARCC2-208ENST00000550150 GRXCR2A6NFK2 248 aa10.36□□□□□ -0.75
SMARCC2-208ENST00000550150 CLCA1A8K7I4 914 aa10.36□□□□□ -0.75
SMARCC2-208ENST00000550150 CPNE3O75131 537 aaKnown RBP10.36□□□□□ -0.75
SMARCC2-208ENST00000550150 SNX4O95219 450 aa10.36□□□□□ -0.75
SMARCC2-208ENST00000550150 LINC00271P0C7V0 271 aa10.36□□□□□ -0.75
SMARCC2-208ENST00000550150 EBLN1P0CF75 366 aa10.36□□□□□ -0.75
SMARCC2-208ENST00000550150 SOAT1P35610 550 aa10.36□□□□□ -0.75
SMARCC2-208ENST00000550150 PRIM2P49643 509 aa10.36□□□□□ -0.75
SMARCC2-208ENST00000550150 CHIT1Q13231 466 aa10.36□□□□□ -0.75
SMARCC2-208ENST00000550150 ZC3H12BQ5HYM0 836 aaKnown RBP10.36□□□□□ -0.75
SMARCC2-208ENST00000550150 C10orf62Q5T681 223 aaPredicted RBP10.36□□□□□ -0.75
SMARCC2-208ENST00000550150 PPP2R2DQ66LE6 453 aa10.36□□□□□ -0.75
SMARCC2-208ENST00000550150 NOXRED1Q6NXP6 359 aa10.36□□□□□ -0.75
SMARCC2-208ENST00000550150 TSPAN33Q86UF1 283 aa10.36□□□□□ -0.75
SMARCC2-208ENST00000550150 GPR65Q8IYL9 337 aa10.36□□□□□ -0.75
SMARCC2-208ENST00000550150 LMNTD1Q8N9Z9 388 aa10.36□□□□□ -0.75
SMARCC2-208ENST00000550150 VPS35Q96QK1 796 aa10.36□□□□□ -0.75
SMARCC2-208ENST00000550150 MGLLQ99685 303 aa10.36□□□□□ -0.75
SMARCC2-208ENST00000550150 SLC30A2Q9BRI3 323 aa10.36□□□□□ -0.75
SMARCC2-208ENST00000550150 ELAC1Q9H777 363 aaKnown RBP10.36□□□□□ -0.75
SMARCC2-208ENST00000550150 IL17CQ9P0M4 197 aa10.36□□□□□ -0.75
SMARCC2-208ENST00000550150 FNIP2Q9P278 1114 aa10.36□□□□□ -0.75
SMARCC2-208ENST00000550150 OARD1Q9Y530 152 aa10.36□□□□□ -0.75
SMARCC2-208ENST00000550150 PEX16Q9Y5Y5 336 aa10.36□□□□□ -0.75
SMARCC2-208ENST00000550150 DRGXA6NNA5 263 aa10.36□□□□□ -0.75
SMARCC2-208ENST00000550150 H3BN98 237 aa10.36□□□□□ -0.75
SMARCC2-208ENST00000550150 ZNF45Q02386 682 aa10.36□□□□□ -0.75
SMARCC2-208ENST00000550150 IRF8Q02556 426 aa10.36□□□□□ -0.75
SMARCC2-208ENST00000550150 ACSM2AQ08AH3 577 aa10.36□□□□□ -0.75
SMARCC2-208ENST00000550150 PPIGQ13427 754 aaKnown RBP eCLIP10.36□□□□□ -0.751e-6■■□□□ 12.4
SMARCC2-208ENST00000550150 ACSM2BQ68CK6 577 aa10.36□□□□□ -0.75
SMARCC2-208ENST00000550150 ZNF544Q6NX49 715 aa10.36□□□□□ -0.75
SMARCC2-208ENST00000550150 PTCHD4Q6ZW05 846 aa10.36□□□□□ -0.75
SMARCC2-208ENST00000550150 EIF3MQ7L2H7 374 aaKnown RBP10.36□□□□□ -0.75
SMARCC2-208ENST00000550150 SZRD1Q7Z422 152 aa10.36□□□□□ -0.75
SMARCC2-208ENST00000550150 BCDIN3DQ7Z5W3 292 aaKnown RBP10.36□□□□□ -0.75
SMARCC2-208ENST00000550150 CADM2Q8N3J6 435 aa10.36□□□□□ -0.75
SMARCC2-208ENST00000550150 BEND7Q8N7W2 519 aaPredicted RBP10.36□□□□□ -0.75
SMARCC2-208ENST00000550150 B3GNT7Q8NFL0 401 aa10.36□□□□□ -0.75
SMARCC2-208ENST00000550150 AUTS2Q8WXX7 1259 aa10.36□□□□□ -0.75
SMARCC2-208ENST00000550150 FOXJ1Q92949 421 aa10.36□□□□□ -0.75
SMARCC2-208ENST00000550150 RANGRFQ9HD47 186 aaPredicted RBP10.36□□□□□ -0.75
SMARCC2-208ENST00000550150 RPRD1BQ9NQG5 326 aaKnown RBP10.36□□□□□ -0.75
SMARCC2-208ENST00000550150 PCDHB8Q9UN66 801 aa10.36□□□□□ -0.75
SMARCC2-208ENST00000550150 MAP4K5Q9Y4K4 846 aa10.36□□□□□ -0.75
SMARCC2-208ENST00000550150 LYVE1Q9Y5Y7 322 aa10.36□□□□□ -0.75
SMARCC2-208ENST00000550150 PIKFYVEQ9Y2I7 2098 aa10.36□□□□□ -0.75
SMARCC2-208ENST00000550150 GLYATL1P3A0A0U1RQE8 302 aa10.35□□□□□ -0.75
SMARCC2-208ENST00000550150 HOXC11O43248 304 aaPredicted RBP10.35□□□□□ -0.75
SMARCC2-208ENST00000550150 OAZ2O95190 189 aa10.35□□□□□ -0.75
SMARCC2-208ENST00000550150 TNFSF8P32971 234 aa10.35□□□□□ -0.75
SMARCC2-208ENST00000550150 UGT2B15P54855 530 aa10.35□□□□□ -0.75
SMARCC2-208ENST00000550150 RAB25P57735 213 aa10.35□□□□□ -0.75
SMARCC2-208ENST00000550150 CXCR4P61073 352 aa10.35□□□□□ -0.75
SMARCC2-208ENST00000550150 SNRPD2P62316 118 aaKnown RBP10.35□□□□□ -0.75
SMARCC2-208ENST00000550150 RUNX1T1Q06455 604 aa10.35□□□□□ -0.75
SMARCC2-208ENST00000550150 NFATC2Q13469 925 aa10.35□□□□□ -0.75
SMARCC2-208ENST00000550150 MRPL58Q14197 206 aaKnown RBP10.35□□□□□ -0.75
SMARCC2-208ENST00000550150 EXOC3L2Q2M3D2 409 aa10.35□□□□□ -0.75
SMARCC2-208ENST00000550150 KLHL17Q6TDP4 642 aa10.35□□□□□ -0.75
SMARCC2-208ENST00000550150 FAM131AQ6UXB0 335 aa10.35□□□□□ -0.75
SMARCC2-208ENST00000550150 RFLNAQ6ZTI6 216 aa10.35□□□□□ -0.75
SMARCC2-208ENST00000550150 SLC46A3Q7Z3Q1 461 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms