RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 TMEM178AQ8NBL3 297 aa4.35□□□□□ -1.71
SNHG1-214ENST00000540865 CCNYQ8ND76 341 aa4.35□□□□□ -1.71
SNHG1-214ENST00000540865 GOT1L1Q8NHS2 421 aaPredicted RBP4.35□□□□□ -1.71
SNHG1-214ENST00000540865 FAM57AQ8TBR7 257 aa4.35□□□□□ -1.71
SNHG1-214ENST00000540865 HEXDCQ8WVB3 486 aa4.35□□□□□ -1.71
SNHG1-214ENST00000540865 TFGQ92734 400 aaPredicted RBP4.35□□□□□ -1.71
SNHG1-214ENST00000540865 DCUN1D1Q96GG9 259 aa4.35□□□□□ -1.71
SNHG1-214ENST00000540865 IMMP1LQ96LU5 166 aa4.35□□□□□ -1.71
SNHG1-214ENST00000540865 ZNF354BQ96LW1 612 aa4.35□□□□□ -1.71
SNHG1-214ENST00000540865 OLFM1Q99784 485 aa4.35□□□□□ -1.71
SNHG1-214ENST00000540865 GPATCH1Q9BRR8 931 aaKnown RBP4.35□□□□□ -1.71
SNHG1-214ENST00000540865 TUBB6Q9BUF5 446 aa4.35□□□□□ -1.71
SNHG1-214ENST00000540865 ZNF700Q9H0M5 742 aa4.35□□□□□ -1.71
SNHG1-214ENST00000540865 THAP2Q9H0W7 228 aa4.35□□□□□ -1.71
SNHG1-214ENST00000540865 COG4Q9H9E3 785 aa4.35□□□□□ -1.71
SNHG1-214ENST00000540865 ZNF304Q9HCX3 659 aa4.35□□□□□ -1.71
SNHG1-214ENST00000540865 MRPL47Q9HD33 250 aaKnown RBP4.35□□□□□ -1.71
SNHG1-214ENST00000540865 LUC7LQ9NQ29 371 aaKnown RBP4.35□□□□□ -1.71
SNHG1-214ENST00000540865 KLHL1Q9NR64 748 aa4.35□□□□□ -1.71
SNHG1-214ENST00000540865 SAMSN1Q9NSI8 373 aaKnown RBP4.35□□□□□ -1.71
SNHG1-214ENST00000540865 C14orf105Q9NVL8 296 aa4.35□□□□□ -1.71
SNHG1-214ENST00000540865 SPHK1Q9NYA1 384 aa4.35□□□□□ -1.71
SNHG1-214ENST00000540865 HACD3Q9P035 362 aa4.35□□□□□ -1.71
SNHG1-214ENST00000540865 LRFN1Q9P244 771 aa4.35□□□□□ -1.71
SNHG1-214ENST00000540865 POLG2Q9UHN1 485 aa4.35□□□□□ -1.71
SNHG1-214ENST00000540865 PKP3Q9Y446 797 aa4.35□□□□□ -1.71
SNHG1-214ENST00000540865 DOCK10Q96BY6 2186 aa4.35□□□□□ -1.71
SNHG1-214ENST00000540865 INTS1Q8N201 2190 aaKnown RBP4.34□□□□□ -1.71
SNHG1-214ENST00000540865 HRNRQ86YZ3 2850 aaPredicted RBP4.34□□□□□ -1.71
SNHG1-214ENST00000540865 LOC285095A0A1B0GVY8 99 aa4.34□□□□□ -1.71
SNHG1-214ENST00000540865 USP27XA6NNY8 438 aa4.34□□□□□ -1.71
SNHG1-214ENST00000540865 AGAP14A8MT82 685 aa4.34□□□□□ -1.71
SNHG1-214ENST00000540865 A8MUI8 341 aa4.34□□□□□ -1.71
SNHG1-214ENST00000540865 TMCO5BA8MYB1 307 aa4.34□□□□□ -1.71
SNHG1-214ENST00000540865 ISM1B1AKI9 464 aa4.34□□□□□ -1.71
SNHG1-214ENST00000540865 KCNK1O00180 336 aa4.34□□□□□ -1.71
SNHG1-214ENST00000540865 PRPF4O43172 522 aaKnown RBP eCLIP4.34□□□□□ -1.71
SNHG1-214ENST00000540865 ZNHIT1O43257 154 aa4.34□□□□□ -1.71
SNHG1-214ENST00000540865 KDM1AO60341 852 aa4.34□□□□□ -1.71
SNHG1-214ENST00000540865 SRPX2O60687 465 aaPredicted RBP4.34□□□□□ -1.71
SNHG1-214ENST00000540865 SUN1O94901 812 aa4.34□□□□□ -1.71
SNHG1-214ENST00000540865 EPOP01588 193 aa4.34□□□□□ -1.71
SNHG1-214ENST00000540865 FTLP02792 175 aaPredicted RBP4.34□□□□□ -1.71
SNHG1-214ENST00000540865 TPOP07202 933 aa4.34□□□□□ -1.71
SNHG1-214ENST00000540865 HEXBP07686 556 aa4.34□□□□□ -1.71
SNHG1-214ENST00000540865 SP1P08047 785 aa4.34□□□□□ -1.71
SNHG1-214ENST00000540865 CELA2AP08217 269 aa4.34□□□□□ -1.71
SNHG1-214ENST00000540865 CD48P09326 243 aa4.34□□□□□ -1.71
SNHG1-214ENST00000540865 MYBL1P10243 752 aa4.34□□□□□ -1.71
SNHG1-214ENST00000540865 GZMAP12544 262 aa4.34□□□□□ -1.71
SNHG1-214ENST00000540865 ATP1B2P14415 290 aaPredicted RBP4.34□□□□□ -1.71
SNHG1-214ENST00000540865 FERP16591 822 aa4.34□□□□□ -1.71
SNHG1-214ENST00000540865 ZNF24P17028 368 aa4.34□□□□□ -1.71
SNHG1-214ENST00000540865 MAGP20916 626 aa4.34□□□□□ -1.71
SNHG1-214ENST00000540865 FBLP22087 321 aaKnown RBP4.34□□□□□ -1.71
SNHG1-214ENST00000540865 MCM3P25205 808 aa4.34□□□□□ -1.71
SNHG1-214ENST00000540865 PDHA2P29803 388 aa4.34□□□□□ -1.71
SNHG1-214ENST00000540865 KIR2DL3P43628 341 aa4.34□□□□□ -1.71
SNHG1-214ENST00000540865 DLX5P56178 289 aa4.34□□□□□ -1.71
SNHG1-214ENST00000540865 SLC25A11Q02978 314 aaKnown RBP4.34□□□□□ -1.71
SNHG1-214ENST00000540865 GBE1Q04446 702 aa4.34□□□□□ -1.71
SNHG1-214ENST00000540865 EEF1A2Q05639 463 aaKnown RBP4.34□□□□□ -1.71
SNHG1-214ENST00000540865 PPIDQ08752 370 aaKnown RBP4.34□□□□□ -1.71
SNHG1-214ENST00000540865 AP1B1Q10567 949 aa4.34□□□□□ -1.71
SNHG1-214ENST00000540865 SLC10A2Q12908 348 aaPredicted RBP4.34□□□□□ -1.71
SNHG1-214ENST00000540865 KEAP1Q14145 624 aa4.34□□□□□ -1.71
SNHG1-214ENST00000540865 DPYSL3Q14195 570 aa4.34□□□□□ -1.71
SNHG1-214ENST00000540865 PIGHQ14442 188 aaPredicted RBP4.34□□□□□ -1.71
SNHG1-214ENST00000540865 OR1C1Q15619 314 aa4.34□□□□□ -1.71
SNHG1-214ENST00000540865 HSP90AA4PQ58FG1 418 aa4.34□□□□□ -1.71
SNHG1-214ENST00000540865 EMC4Q5J8M3 183 aa4.34□□□□□ -1.71
SNHG1-214ENST00000540865 ACER2Q5QJU3 275 aa4.34□□□□□ -1.71
SNHG1-214ENST00000540865 FKBP15Q5T1M5 1219 aa4.34□□□□□ -1.71
SNHG1-214ENST00000540865 SLC25A25Q6KCM7 469 aa4.34□□□□□ -1.71
SNHG1-214ENST00000540865 H3F3CQ6NXT2 135 aa4.34□□□□□ -1.71
SNHG1-214ENST00000540865 TMEM205Q6UW68 189 aa4.34□□□□□ -1.71
SNHG1-214ENST00000540865 GLT6D1Q7Z4J2 308 aa4.34□□□□□ -1.71
SNHG1-214ENST00000540865 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.34□□□□□ -1.71
SNHG1-214ENST00000540865 STK32CQ86UX6 486 aa4.34□□□□□ -1.71
SNHG1-214ENST00000540865 PAQR7Q86WK9 346 aa4.34□□□□□ -1.71
SNHG1-214ENST00000540865 CCDC71Q8IV32 467 aaPredicted RBP4.34□□□□□ -1.71
SNHG1-214ENST00000540865 MAP7D3Q8IWC1 876 aa4.34□□□□□ -1.71
SNHG1-214ENST00000540865 ZZZ3Q8IYH5 903 aa4.34□□□□□ -1.71
SNHG1-214ENST00000540865 TBC1D21Q8IYX1 336 aa4.34□□□□□ -1.71
SNHG1-214ENST00000540865 BEST3Q8N1M1 668 aa4.34□□□□□ -1.71
SNHG1-214ENST00000540865 METTL27Q8N6F8 245 aaPredicted RBP4.34□□□□□ -1.71
SNHG1-214ENST00000540865 NIPA2Q8N8Q9 360 aa4.34□□□□□ -1.71
SNHG1-214ENST00000540865 POGLUT1Q8NBL1 392 aa4.34□□□□□ -1.71
SNHG1-214ENST00000540865 SIMC1Q8NDZ2 872 aa4.34□□□□□ -1.71
SNHG1-214ENST00000540865 NEK11Q8NG66 645 aa4.34□□□□□ -1.71
SNHG1-214ENST00000540865 OR5AR1Q8NGP9 310 aa4.34□□□□□ -1.71
SNHG1-214ENST00000540865 SPATA22Q8NHS9 363 aa4.34□□□□□ -1.71
SNHG1-214ENST00000540865 UHMK1Q8TAS1 419 aaKnown RBP4.34□□□□□ -1.71
SNHG1-214ENST00000540865 NAT14Q8WUY8 206 aa4.34□□□□□ -1.71
SNHG1-214ENST00000540865 SLC22A18Q96BI1 424 aa4.34□□□□□ -1.71
SNHG1-214ENST00000540865 ZNF830Q96NB3 372 aaPredicted RBP4.34□□□□□ -1.71
SNHG1-214ENST00000540865 SIGLEC12Q96PQ1 595 aa4.34□□□□□ -1.71
SNHG1-214ENST00000540865 COPS8Q99627 209 aa4.34□□□□□ -1.71
SNHG1-214ENST00000540865 SELENOSQ9BQE4 189 aa4.34□□□□□ -1.71
SNHG1-214ENST00000540865 UTP23Q9BRU9 249 aaKnown RBP4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms