RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 CNOT10Q9H9A5 744 aaKnown RBP12.44□□□□□ -0.42
CHFR-216ENST00000538235 TMBIM4Q9HC24 238 aa12.44□□□□□ -0.42
CHFR-216ENST00000538235 IRAK4Q9NWZ3 460 aa12.44□□□□□ -0.42
CHFR-216ENST00000538235 DCDC2Q9UHG0 476 aa12.44□□□□□ -0.42
CHFR-216ENST00000538235 ZFP69BQ9UJL9 534 aa12.44□□□□□ -0.42
CHFR-216ENST00000538235 BSNQ9UPA5 3926 aa12.43□□□□□ -0.42
CHFR-216ENST00000538235 MASP2O00187 686 aa12.43□□□□□ -0.42
CHFR-216ENST00000538235 RGS16O15492 202 aaPredicted RBP12.43□□□□□ -0.42
CHFR-216ENST00000538235 SH3BGRLO75368 114 aa12.43□□□□□ -0.42
CHFR-216ENST00000538235 KATNA1O75449 491 aa12.43□□□□□ -0.42
CHFR-216ENST00000538235 JRKO75564 520 aa12.43□□□□□ -0.42
CHFR-216ENST00000538235 KLF7O75840 302 aaPredicted RBP12.43□□□□□ -0.42
CHFR-216ENST00000538235 ONECUT2O95948 504 aa12.43□□□□□ -0.42
CHFR-216ENST00000538235 ZNF888P0CJ79 500 aaPredicted RBP12.43□□□□□ -0.42
CHFR-216ENST00000538235 EPB42P16452 691 aa12.43□□□□□ -0.42
CHFR-216ENST00000538235 ALDH3A1P30838 453 aa12.43□□□□□ -0.42
CHFR-216ENST00000538235 DLSTP36957 453 aa12.43□□□□□ -0.42
CHFR-216ENST00000538235 ATP1A2P50993 1020 aa12.43□□□□□ -0.42
CHFR-216ENST00000538235 OLR1P78380 273 aa12.43□□□□□ -0.42
CHFR-216ENST00000538235 IRF8Q02556 426 aa12.43□□□□□ -0.42
CHFR-216ENST00000538235 ABHD18Q0P651 414 aa12.43□□□□□ -0.42
CHFR-216ENST00000538235 NAA25Q14CX7 972 aa12.43□□□□□ -0.42
CHFR-216ENST00000538235 RBBP5Q15291 538 aaKnown RBP12.43□□□□□ -0.42
CHFR-216ENST00000538235 NKAIN1Q4KMZ8 207 aa12.43□□□□□ -0.42
CHFR-216ENST00000538235 TOR1AIP1Q5JTV8 583 aa12.43□□□□□ -0.42
CHFR-216ENST00000538235 TCTE1Q5JU00 501 aa12.43□□□□□ -0.42
CHFR-216ENST00000538235 MRPL14Q6P1L8 145 aaKnown RBP12.43□□□□□ -0.42
CHFR-216ENST00000538235 TMIGD1Q6UXZ0 262 aa12.43□□□□□ -0.42
CHFR-216ENST00000538235 ZCCHC23Q6ZST2 131 aa12.43□□□□□ -0.42
CHFR-216ENST00000538235 ENDOVQ8N8Q3 282 aaKnown RBP12.43□□□□□ -0.42
CHFR-216ENST00000538235 L3MBTL4Q8NA19 623 aa12.43□□□□□ -0.42
CHFR-216ENST00000538235 OR7G3Q8NG95 312 aa12.43□□□□□ -0.42
CHFR-216ENST00000538235 OR4F6Q8NGB9 312 aa12.43□□□□□ -0.42
CHFR-216ENST00000538235 OR6Y1Q8NGX8 325 aa12.43□□□□□ -0.42
CHFR-216ENST00000538235 WDR20Q8TBZ3 569 aa12.43□□□□□ -0.42
CHFR-216ENST00000538235 UTP15Q8TED0 518 aaKnown RBP12.43□□□□□ -0.42
CHFR-216ENST00000538235 TRPC4APQ8TEL6 797 aa12.43□□□□□ -0.42
CHFR-216ENST00000538235 ZNF473Q8WTR7 871 aaKnown RBP12.43□□□□□ -0.42
CHFR-216ENST00000538235 SLC13A3Q8WWT9 602 aa12.43□□□□□ -0.42
CHFR-216ENST00000538235 N4BP2L2Q92802 583 aaPredicted RBP12.43□□□□□ -0.42
CHFR-216ENST00000538235 SPSB2Q99619 263 aa12.43□□□□□ -0.42
CHFR-216ENST00000538235 GATA5Q9BWX5 397 aaPredicted RBP12.43□□□□□ -0.42
CHFR-216ENST00000538235 SORBS1Q9BX66 1292 aaKnown RBP12.43□□□□□ -0.42
CHFR-216ENST00000538235 MS4A8Q9BY19 250 aa12.43□□□□□ -0.42
CHFR-216ENST00000538235 FARSBQ9NSD9 589 aaKnown RBP12.43□□□□□ -0.42
CHFR-216ENST00000538235 SRPK3Q9UPE1 567 aa12.43□□□□□ -0.42
CHFR-216ENST00000538235 OR2W5A6NFC9 320 aa12.42□□□□□ -0.42
CHFR-216ENST00000538235 SGK494L7N484 410 aa12.42□□□□□ -0.42
CHFR-216ENST00000538235 CLGNO14967 610 aa12.42□□□□□ -0.42
CHFR-216ENST00000538235 NKX2-8O15522 239 aa12.42□□□□□ -0.42
CHFR-216ENST00000538235 RDH16O75452 317 aa12.42□□□□□ -0.42
CHFR-216ENST00000538235 OR4F21O95013 312 aa12.42□□□□□ -0.42
CHFR-216ENST00000538235 UMODP07911 640 aa12.42□□□□□ -0.42
CHFR-216ENST00000538235 DHRS4L1P0CG22 281 aa12.42□□□□□ -0.42
CHFR-216ENST00000538235 AHRP35869 848 aa12.42□□□□□ -0.42
CHFR-216ENST00000538235 HNF4AP41235 474 aa12.42□□□□□ -0.42
CHFR-216ENST00000538235 NEK2P51955 445 aa12.42□□□□□ -0.42
CHFR-216ENST00000538235 RAB8AP61006 207 aa12.42□□□□□ -0.42
CHFR-216ENST00000538235 CLCQ05315 142 aa12.42□□□□□ -0.42
CHFR-216ENST00000538235 NCF4Q15080 339 aa12.42□□□□□ -0.42
CHFR-216ENST00000538235 COL28A1Q2UY09 1125 aa12.42□□□□□ -0.42
CHFR-216ENST00000538235 ADPRMQ3LIE5 342 aa12.42□□□□□ -0.42
CHFR-216ENST00000538235 ZNF793Q6ZN11 406 aa12.42□□□□□ -0.42
CHFR-216ENST00000538235 SHISA6Q6ZSJ9 500 aa12.42□□□□□ -0.42
CHFR-216ENST00000538235 IL22RA1Q8N6P7 574 aa12.42□□□□□ -0.42
CHFR-216ENST00000538235 TTC29Q8NA56 475 aaPredicted RBP12.42□□□□□ -0.42
CHFR-216ENST00000538235 PROKR1Q8TCW9 393 aa12.42□□□□□ -0.42
CHFR-216ENST00000538235 ADAMTS17Q8TE56 1095 aa12.42□□□□□ -0.42
CHFR-216ENST00000538235 MS4A6EQ96DS6 147 aa12.42□□□□□ -0.42
CHFR-216ENST00000538235 THAP11Q96EK4 314 aa12.42□□□□□ -0.42
CHFR-216ENST00000538235 QRFPRQ96P65 431 aa12.42□□□□□ -0.42
CHFR-216ENST00000538235 HBEGFQ99075 208 aa12.42□□□□□ -0.42
CHFR-216ENST00000538235 NDC1Q9BTX1 674 aa12.42□□□□□ -0.42
CHFR-216ENST00000538235 EFCAB11Q9BUY7 163 aa12.42□□□□□ -0.42
CHFR-216ENST00000538235 ZNF717Q9BY31 904 aaPredicted RBP12.42□□□□□ -0.42
CHFR-216ENST00000538235 RHBGQ9H310 441 aa12.42□□□□□ -0.42
CHFR-216ENST00000538235 CENPHQ9H3R5 247 aa12.42□□□□□ -0.42
CHFR-216ENST00000538235 ACTL8Q9H568 366 aa12.42□□□□□ -0.42
CHFR-216ENST00000538235 NT5DC2Q9H857 520 aa12.42□□□□□ -0.42
CHFR-216ENST00000538235 MLXIPLQ9NP71 852 aa12.42□□□□□ -0.42
CHFR-216ENST00000538235 WDR70Q9NW82 654 aa12.42□□□□□ -0.42
CHFR-216ENST00000538235 OXSMQ9NWU1 459 aa12.42□□□□□ -0.42
CHFR-216ENST00000538235 NDOR1Q9UHB4 597 aa12.42□□□□□ -0.42
CHFR-216ENST00000538235 ZFYVE26Q68DK2 2539 aa12.42□□□□□ -0.42
CHFR-216ENST00000538235 RTCAO00442 366 aaKnown RBP12.41□□□□□ -0.42
CHFR-216ENST00000538235 SUPT7LO94864 414 aa12.41□□□□□ -0.42
CHFR-216ENST00000538235 KLHL18O94889 574 aa12.41□□□□□ -0.42
CHFR-216ENST00000538235 SERPIND1P05546 499 aa12.41□□□□□ -0.42
CHFR-216ENST00000538235 CHRNGP07510 517 aa12.41□□□□□ -0.42
CHFR-216ENST00000538235 MYL2P10916 166 aa12.41□□□□□ -0.42
CHFR-216ENST00000538235 CPA3P15088 417 aa12.41□□□□□ -0.42
CHFR-216ENST00000538235 CHN1P15882 459 aa12.41□□□□□ -0.42
CHFR-216ENST00000538235 TCN2P20062 427 aa12.41□□□□□ -0.42
CHFR-216ENST00000538235 IMPDH1P20839 514 aa12.41□□□□□ -0.42
CHFR-216ENST00000538235 ALAS2P22557 587 aa12.41□□□□□ -0.42
CHFR-216ENST00000538235 NAGLUP54802 743 aa12.41□□□□□ -0.42
CHFR-216ENST00000538235 EMP3P54852 163 aa12.41□□□□□ -0.42
CHFR-216ENST00000538235 WDR4P57081 412 aaKnown RBP12.41□□□□□ -0.42
CHFR-216ENST00000538235 ZRSR2Q15696 482 aaKnown RBP12.41□□□□□ -0.42
CHFR-216ENST00000538235 NKG7Q16617 165 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms