RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 NR0B1P51843 470 aaKnown RBP9.09□□□□□ -0.95
SSBP3-215ENST00000533946 RPS15AP62244 130 aaKnown RBP9.09□□□□□ -0.95
SSBP3-215ENST00000533946 REEP5Q00765 189 aa9.09□□□□□ -0.95
SSBP3-215ENST00000533946 PMP22Q01453 160 aa9.09□□□□□ -0.95
SSBP3-215ENST00000533946 RHAGQ02094 409 aa9.09□□□□□ -0.95
SSBP3-215ENST00000533946 RELAQ04206 551 aa9.09□□□□□ -0.95
SSBP3-215ENST00000533946 AIMP2Q13155 320 aaKnown RBP9.09□□□□□ -0.95
SSBP3-215ENST00000533946 SP140Q13342 867 aa9.09□□□□□ -0.95
SSBP3-215ENST00000533946 MINDY4Q4G0A6 757 aa9.09□□□□□ -0.95
SSBP3-215ENST00000533946 ZNF468Q5VIY5 522 aaPredicted RBP9.09□□□□□ -0.95
SSBP3-215ENST00000533946 NXPE4Q6UWF7 544 aa9.09□□□□□ -0.95
SSBP3-215ENST00000533946 IGFL2Q6UWQ7 119 aa9.09□□□□□ -0.95
SSBP3-215ENST00000533946 IGFL3Q6UXB1 125 aa9.09□□□□□ -0.95
SSBP3-215ENST00000533946 SLCO4C1Q6ZQN7 724 aa9.09□□□□□ -0.95
SSBP3-215ENST00000533946 ZNF572Q7Z3I7 529 aaPredicted RBP9.09□□□□□ -0.95
SSBP3-215ENST00000533946 ANKRD37Q7Z713 158 aa9.09□□□□□ -0.95
SSBP3-215ENST00000533946 TMPRSS11BQ86T26 416 aa9.09□□□□□ -0.95
SSBP3-215ENST00000533946 PALM2Q8IXS6 379 aa9.09□□□□□ -0.95
SSBP3-215ENST00000533946 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.09□□□□□ -0.952e-6■■■■■ 40.9
SSBP3-215ENST00000533946 PPM1NQ8N819 430 aa9.09□□□□□ -0.95
SSBP3-215ENST00000533946 UTP15Q8TED0 518 aaKnown RBP9.09□□□□□ -0.95
SSBP3-215ENST00000533946 SLC5A11Q8WWX8 675 aa9.09□□□□□ -0.95
SSBP3-215ENST00000533946 CNDP1Q96KN2 507 aa9.09□□□□□ -0.95
SSBP3-215ENST00000533946 MAGEB10Q96LZ2 347 aaPredicted RBP9.09□□□□□ -0.95
SSBP3-215ENST00000533946 CYTH2Q99418 400 aa9.09□□□□□ -0.95
SSBP3-215ENST00000533946 RBBP8Q99708 897 aa9.09□□□□□ -0.95
SSBP3-215ENST00000533946 C17orf62Q9BQA9 187 aa9.09□□□□□ -0.95
SSBP3-215ENST00000533946 TGIF2Q9GZN2 237 aa9.09□□□□□ -0.95
SSBP3-215ENST00000533946 RHBGQ9H310 441 aa9.09□□□□□ -0.95
SSBP3-215ENST00000533946 GPAMQ9HCL2 828 aa9.09□□□□□ -0.95
SSBP3-215ENST00000533946 SLAMF7Q9NQ25 335 aa9.09□□□□□ -0.95
SSBP3-215ENST00000533946 IGSF5Q9NSI5 407 aa9.09□□□□□ -0.95
SSBP3-215ENST00000533946 ZNF358Q9NW07 568 aa9.09□□□□□ -0.95
SSBP3-215ENST00000533946 ZNF490Q9ULM2 529 aaPredicted RBP9.09□□□□□ -0.95
SSBP3-215ENST00000533946 B3GNT3Q9Y2A9 372 aa9.09□□□□□ -0.95
SSBP3-215ENST00000533946 CLDN16Q9Y5I7 305 aa9.09□□□□□ -0.95
SSBP3-215ENST00000533946 MRFAP1Q9Y605 127 aa9.09□□□□□ -0.95
SSBP3-215ENST00000533946 UNC79Q9P2D8 2635 aa9.09□□□□□ -0.95
SSBP3-215ENST00000533946 LOC102723996A0A087X1L8 192 aa9.08□□□□□ -0.96
SSBP3-215ENST00000533946 TRBC2A0A5B9 178 aa9.08□□□□□ -0.96
SSBP3-215ENST00000533946 A1L4Q6 167 aa9.08□□□□□ -0.96
SSBP3-215ENST00000533946 A8MUA0 341 aa9.08□□□□□ -0.96
SSBP3-215ENST00000533946 E2F3O00716 465 aa9.08□□□□□ -0.96
SSBP3-215ENST00000533946 MAP2K7O14733 419 aa9.08□□□□□ -0.96
SSBP3-215ENST00000533946 GALR3O60755 368 aaPredicted RBP9.08□□□□□ -0.96
SSBP3-215ENST00000533946 DPM1O60762 260 aa9.08□□□□□ -0.96
SSBP3-215ENST00000533946 B4GALT2O60909 372 aa9.08□□□□□ -0.96
SSBP3-215ENST00000533946 WDR47O94967 919 aa9.08□□□□□ -0.96
SSBP3-215ENST00000533946 NSA2O95478 260 aaKnown RBP9.08□□□□□ -0.96
SSBP3-215ENST00000533946 CBX6O95503 412 aa9.08□□□□□ -0.96
SSBP3-215ENST00000533946 HPP00738 406 aa9.08□□□□□ -0.96
SSBP3-215ENST00000533946 SLC35E2BP0CK96 405 aa9.08□□□□□ -0.96
SSBP3-215ENST00000533946 SMIM10L1P0DMW3 83 aa9.08□□□□□ -0.96
SSBP3-215ENST00000533946 PIM1P11309 404 aaPredicted RBP9.08□□□□□ -0.96
SSBP3-215ENST00000533946 MAOAP21397 527 aa9.08□□□□□ -0.96
SSBP3-215ENST00000533946 CCR8P51685 355 aa9.08□□□□□ -0.96
SSBP3-215ENST00000533946 EMP3P54852 163 aa9.08□□□□□ -0.96
SSBP3-215ENST00000533946 RUNX2Q13950 521 aa9.08□□□□□ -0.96
SSBP3-215ENST00000533946 FAM53BQ14153 422 aa9.08□□□□□ -0.96
SSBP3-215ENST00000533946 CSHL1Q14406 222 aa9.08□□□□□ -0.96
SSBP3-215ENST00000533946 USP10Q14694 798 aaKnown RBP9.08□□□□□ -0.96
SSBP3-215ENST00000533946 RBBP5Q15291 538 aaKnown RBP9.08□□□□□ -0.96
SSBP3-215ENST00000533946 TGFBIQ15582 683 aa9.08□□□□□ -0.96
SSBP3-215ENST00000533946 ZKSCAN8Q15776 578 aaPredicted RBP9.08□□□□□ -0.96
SSBP3-215ENST00000533946 MFSD4BQ5TF39 518 aa9.08□□□□□ -0.96
SSBP3-215ENST00000533946 C16orf47Q6ZP98 133 aaPredicted RBP9.08□□□□□ -0.96
SSBP3-215ENST00000533946 NDUFAF7Q7L592 441 aa9.08□□□□□ -0.96
SSBP3-215ENST00000533946 CTAGE3PQ8IX95 158 aa9.08□□□□□ -0.96
SSBP3-215ENST00000533946 PLD6Q8N2A8 252 aaKnown RBP9.08□□□□□ -0.96
SSBP3-215ENST00000533946 UHMK1Q8TAS1 419 aaKnown RBP9.08□□□□□ -0.96
SSBP3-215ENST00000533946 DNAJB14Q8TBM8 379 aa9.08□□□□□ -0.96
SSBP3-215ENST00000533946 DOK4Q8TEW6 326 aa9.08□□□□□ -0.96
SSBP3-215ENST00000533946 NXNL1Q96CM4 212 aa9.08□□□□□ -0.96
SSBP3-215ENST00000533946 SMIM10Q96HG1 83 aa9.08□□□□□ -0.96
SSBP3-215ENST00000533946 PSMG3-AS1Q96PY0 264 aa9.08□□□□□ -0.96
SSBP3-215ENST00000533946 GPR22Q99680 433 aa9.08□□□□□ -0.96
SSBP3-215ENST00000533946 BARD1Q99728 777 aaKnown RBP9.08□□□□□ -0.96
SSBP3-215ENST00000533946 SORBS1Q9BX66 1292 aaKnown RBP9.08□□□□□ -0.96
SSBP3-215ENST00000533946 LHPPQ9H008 270 aa9.08□□□□□ -0.96
SSBP3-215ENST00000533946 ZNF700Q9H0M5 742 aa9.08□□□□□ -0.96
SSBP3-215ENST00000533946 MKKSQ9NPJ1 570 aaPredicted RBP9.08□□□□□ -0.96
SSBP3-215ENST00000533946 NECTIN3Q9NQS3 549 aa9.08□□□□□ -0.96
SSBP3-215ENST00000533946 ANKRD10Q9NXR5 420 aa9.08□□□□□ -0.96
SSBP3-215ENST00000533946 NINJ2Q9NZG7 142 aa9.08□□□□□ -0.96
SSBP3-215ENST00000533946 CTNNAL1Q9UBT7 734 aa9.08□□□□□ -0.96
SSBP3-215ENST00000533946 ERRFI1Q9UJM3 462 aaPredicted RBP9.08□□□□□ -0.96
SSBP3-215ENST00000533946 OARD1Q9Y530 152 aa9.08□□□□□ -0.96
SSBP3-215ENST00000533946 FBN2P35556 2912 aa9.08□□□□□ -0.96
SSBP3-215ENST00000533946 DOPEY1Q5JWR5 2465 aa9.08□□□□□ -0.96
SSBP3-215ENST00000533946 DIDO1Q9BTC0 2240 aaKnown RBP9.08□□□□□ -0.96
SSBP3-215ENST00000533946 CSMD1Q96PZ7 3565 aa9.07□□□□□ -0.96
SSBP3-215ENST00000533946 EML6Q6ZMW3 1958 aa9.07□□□□□ -0.96
SSBP3-215ENST00000533946 NSG1A0A0A6YYJ2 146 aa9.07□□□□□ -0.96
SSBP3-215ENST00000533946 A0A1W2PQ72 361 aa9.07□□□□□ -0.96
SSBP3-215ENST00000533946 ZNF839A8K0R7 811 aa9.07□□□□□ -0.96
SSBP3-215ENST00000533946 WASHC1A8K0Z3 465 aa9.07□□□□□ -0.96
SSBP3-215ENST00000533946 A8MUI8 341 aa9.07□□□□□ -0.96
SSBP3-215ENST00000533946 FOXO6A8MYZ6 492 aa9.07□□□□□ -0.96
SSBP3-215ENST00000533946 UBXN8O00124 270 aa9.07□□□□□ -0.96
SSBP3-215ENST00000533946 URI1O94763 535 aaPredicted RBP9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms