RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 LCN1P1Q5VSP4 162 aa3.23□□□□□ -1.89
PTPRK-220ENST00000531466 SLC30A6Q6NXT4 461 aa3.23□□□□□ -1.89
PTPRK-220ENST00000531466 NOTUMQ6P988 496 aa3.23□□□□□ -1.89
PTPRK-220ENST00000531466 IKBIPQ70UQ0 350 aa3.23□□□□□ -1.89
PTPRK-220ENST00000531466 HAUS6Q7Z4H7 955 aa3.23□□□□□ -1.89
PTPRK-220ENST00000531466 CCDC170Q8IYT3 715 aa3.23□□□□□ -1.89
PTPRK-220ENST00000531466 NUP93Q8N1F7 819 aa3.23□□□□□ -1.89
PTPRK-220ENST00000531466 TTC39CQ8N584 583 aa3.23□□□□□ -1.89
PTPRK-220ENST00000531466 C11orf42Q8N5U0 333 aa3.23□□□□□ -1.89
PTPRK-220ENST00000531466 TRIML2Q8N7C3 387 aa3.23□□□□□ -1.89
PTPRK-220ENST00000531466 LINC00469Q8N7U9 141 aa3.23□□□□□ -1.89
PTPRK-220ENST00000531466 AVL9Q8NBF6 648 aa3.23□□□□□ -1.89
PTPRK-220ENST00000531466 OR11H4Q8NGC9 324 aa3.23□□□□□ -1.89
PTPRK-220ENST00000531466 GOT1L1Q8NHS2 421 aaPredicted RBP3.23□□□□□ -1.89
PTPRK-220ENST00000531466 ERMNQ8TAM6 284 aa3.23□□□□□ -1.89
PTPRK-220ENST00000531466 APOBEC4Q8WW27 367 aaKnown RBP3.23□□□□□ -1.89
PTPRK-220ENST00000531466 CDKL2Q92772 493 aa3.23□□□□□ -1.89
PTPRK-220ENST00000531466 SERAC1Q96JX3 654 aa3.23□□□□□ -1.89
PTPRK-220ENST00000531466 OR6C1Q96RD1 312 aa3.23□□□□□ -1.89
PTPRK-220ENST00000531466 PSMB7Q99436 277 aa3.23□□□□□ -1.89
PTPRK-220ENST00000531466 SLF1Q9BQI6 1058 aa3.23□□□□□ -1.89
PTPRK-220ENST00000531466 CRACR2AQ9BSW2 395 aa3.23□□□□□ -1.89
PTPRK-220ENST00000531466 TXLNGYQ9BZA5 131 aa3.23□□□□□ -1.89
PTPRK-220ENST00000531466 C2orf40Q9H1Z8 148 aa3.23□□□□□ -1.89
PTPRK-220ENST00000531466 TNMDQ9H2S6 317 aa3.23□□□□□ -1.89
PTPRK-220ENST00000531466 CHMP5Q9NZZ3 219 aa3.23□□□□□ -1.89
PTPRK-220ENST00000531466 THAP10Q9P2Z0 257 aaPredicted RBP3.23□□□□□ -1.89
PTPRK-220ENST00000531466 TBC1D29Q9UFV1 150 aa3.23□□□□□ -1.89
PTPRK-220ENST00000531466 NINLQ9Y2I6 1382 aa3.23□□□□□ -1.89
PTPRK-220ENST00000531466 GAKO14976 1311 aa3.22□□□□□ -1.89
PTPRK-220ENST00000531466 MYO1GB0I1T2 1018 aa3.22□□□□□ -1.89
PTPRK-220ENST00000531466 PSMA7O14818 248 aa3.22□□□□□ -1.89
PTPRK-220ENST00000531466 VILLO15195 856 aa3.22□□□□□ -1.89
PTPRK-220ENST00000531466 SPOPO43791 374 aa3.22□□□□□ -1.89
PTPRK-220ENST00000531466 SLCO2B1O94956 709 aa3.22□□□□□ -1.89
PTPRK-220ENST00000531466 CSH1P0DML2 217 aa3.22□□□□□ -1.89
PTPRK-220ENST00000531466 CSH2P0DML3 217 aa3.22□□□□□ -1.89
PTPRK-220ENST00000531466 DLATP10515 647 aaKnown RBP3.22□□□□□ -1.89
PTPRK-220ENST00000531466 PCP11498 1178 aaKnown RBP3.22□□□□□ -1.89
PTPRK-220ENST00000531466 DARSP14868 501 aaKnown RBP3.22□□□□□ -1.89
PTPRK-220ENST00000531466 CDH3P22223 829 aa3.22□□□□□ -1.89
PTPRK-220ENST00000531466 PBLDP30039 288 aaPredicted RBP3.22□□□□□ -1.89
PTPRK-220ENST00000531466 ATP5OP48047 213 aa3.22□□□□□ -1.89
PTPRK-220ENST00000531466 LMAN1P49257 510 aa3.22□□□□□ -1.89
PTPRK-220ENST00000531466 CAMPP49913 170 aa3.22□□□□□ -1.89
PTPRK-220ENST00000531466 TKTL1P51854 596 aa3.22□□□□□ -1.89
PTPRK-220ENST00000531466 CREB5Q02930 508 aa3.22□□□□□ -1.89
PTPRK-220ENST00000531466 KLHL30Q0D2K2 578 aa3.22□□□□□ -1.89
PTPRK-220ENST00000531466 TFCP2Q12800 502 aa3.22□□□□□ -1.89
PTPRK-220ENST00000531466 RCN1Q15293 331 aa3.22□□□□□ -1.89
PTPRK-220ENST00000531466 SHROOM1Q2M3G4 852 aaPredicted RBP3.22□□□□□ -1.89
PTPRK-220ENST00000531466 CCDC40Q4G0X9 1142 aa3.22□□□□□ -1.89
PTPRK-220ENST00000531466 FAM98BQ52LJ0 330 aaKnown RBP3.22□□□□□ -1.89
PTPRK-220ENST00000531466 KRBOX4Q5JUW0 171 aa3.22□□□□□ -1.89
PTPRK-220ENST00000531466 RAB12Q6IQ22 244 aa3.22□□□□□ -1.89
PTPRK-220ENST00000531466 TMEM154Q6P9G4 183 aa3.22□□□□□ -1.89
PTPRK-220ENST00000531466 OLFM4Q6UX06 510 aa3.22□□□□□ -1.89
PTPRK-220ENST00000531466 BAIAP2L2Q6UXY1 529 aa3.22□□□□□ -1.89
PTPRK-220ENST00000531466 LPCAT2Q7L5N7 544 aa3.22□□□□□ -1.89
PTPRK-220ENST00000531466 ADGRF2Q8IZF7 708 aa3.22□□□□□ -1.89
PTPRK-220ENST00000531466 OR8H3Q8N146 312 aa3.22□□□□□ -1.89
PTPRK-220ENST00000531466 ARHGAP24Q8N264 748 aa3.22□□□□□ -1.89
PTPRK-220ENST00000531466 NAT8LQ8N9F0 302 aa3.22□□□□□ -1.89
PTPRK-220ENST00000531466 SPC24Q8NBT2 197 aa3.22□□□□□ -1.89
PTPRK-220ENST00000531466 BBOF1Q8ND07 529 aa3.22□□□□□ -1.89
PTPRK-220ENST00000531466 OR52K1Q8NGK4 314 aa3.22□□□□□ -1.89
PTPRK-220ENST00000531466 OR2AJ1Q8NGZ0 328 aa3.22□□□□□ -1.89
PTPRK-220ENST00000531466 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.22□□□□□ -1.89
PTPRK-220ENST00000531466 CASP10Q92851 521 aa3.22□□□□□ -1.89
PTPRK-220ENST00000531466 DHX58Q96C10 678 aa3.22□□□□□ -1.89
PTPRK-220ENST00000531466 FAM120BQ96EK7 910 aaKnown RBP3.22□□□□□ -1.89
PTPRK-220ENST00000531466 B3GALT6Q96L58 329 aa3.22□□□□□ -1.89
PTPRK-220ENST00000531466 GAL3ST1Q99999 423 aa3.22□□□□□ -1.89
PTPRK-220ENST00000531466 UQCC2Q9BRT2 126 aa3.22□□□□□ -1.89
PTPRK-220ENST00000531466 NSRP1Q9H0G5 558 aaKnown RBP3.22□□□□□ -1.89
PTPRK-220ENST00000531466 PARVGQ9HBI0 331 aa3.22□□□□□ -1.89
PTPRK-220ENST00000531466 GTSE1Q9NYZ3 720 aa3.22□□□□□ -1.89
PTPRK-220ENST00000531466 ZFP37Q9Y6Q3 630 aaPredicted RBP3.22□□□□□ -1.89
PTPRK-220ENST00000531466 KIF7Q2M1P5 1343 aa3.21□□□□□ -1.89
PTPRK-220ENST00000531466 MROH5Q6ZUA9 1318 aa3.21□□□□□ -1.89
PTPRK-220ENST00000531466 IGHV4-30-2A0A087WSY4 118 aa3.21□□□□□ -1.9
PTPRK-220ENST00000531466 GPR75-ASB3A0A0A6YYF3 556 aa3.21□□□□□ -1.9
PTPRK-220ENST00000531466 LRRIQ4A6NIV6 560 aa3.21□□□□□ -1.9
PTPRK-220ENST00000531466 CDRT15L2A8MXV6 281 aa3.21□□□□□ -1.9
PTPRK-220ENST00000531466 A8MZ25 164 aa3.21□□□□□ -1.9
PTPRK-220ENST00000531466 PTGES3LE9PB15 166 aa3.21□□□□□ -1.9
PTPRK-220ENST00000531466 L7N2F9 121 aa3.21□□□□□ -1.9
PTPRK-220ENST00000531466 HS6ST1O60243 411 aa3.21□□□□□ -1.9
PTPRK-220ENST00000531466 RANBP6O60518 1105 aaKnown RBP3.21□□□□□ -1.9
PTPRK-220ENST00000531466 SNAP91O60641 907 aa3.21□□□□□ -1.9
PTPRK-220ENST00000531466 SLITRK3O94933 977 aa3.21□□□□□ -1.9
PTPRK-220ENST00000531466 OR2C1O95371 312 aa3.21□□□□□ -1.9
PTPRK-220ENST00000531466 ADCY5O95622 1261 aa3.21□□□□□ -1.9
PTPRK-220ENST00000531466 TRUB2O95900 331 aaKnown RBP3.21□□□□□ -1.9
PTPRK-220ENST00000531466 HEXBP07686 556 aa3.21□□□□□ -1.9
PTPRK-220ENST00000531466 PDGFRAP16234 1089 aa3.21□□□□□ -1.9
PTPRK-220ENST00000531466 PORP16435 677 aaPredicted RBP3.21□□□□□ -1.9
PTPRK-220ENST00000531466 ZNF19P17023 458 aa3.21□□□□□ -1.9
PTPRK-220ENST00000531466 GAP43P17677 238 aa3.21□□□□□ -1.9
PTPRK-220ENST00000531466 CSTF2P33240 577 aaKnown RBP eCLIP3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms