RNA–Protein interactions for RNA: ENST00000526734.5

VPS28-206, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS28, Length 570 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-206ENST00000526734 ZNF700Q9H0M5 742 aa19.51■□□□□ 0.71
VPS28-206ENST00000526734 EHD1Q9H4M9 534 aa19.51■□□□□ 0.71
VPS28-206ENST00000526734 NMRAL1Q9HBL8 299 aa19.51■□□□□ 0.71
VPS28-206ENST00000526734 ZNF160Q9HCG1 818 aa19.51■□□□□ 0.71
VPS28-206ENST00000526734 NAALAD2Q9Y3Q0 740 aa19.51■□□□□ 0.71
VPS28-206ENST00000526734 IGHV1-45A0A0A0MS14 117 aa19.5■□□□□ 0.71
VPS28-206ENST00000526734 FFAR3O14843 346 aa19.5■□□□□ 0.71
VPS28-206ENST00000526734 GPR42O15529 346 aa19.5■□□□□ 0.71
VPS28-206ENST00000526734 SERPINA7P05543 415 aa19.5■□□□□ 0.71
VPS28-206ENST00000526734 C8orf89P0DMQ9 161 aa19.5■□□□□ 0.71
VPS28-206ENST00000526734 C1GALT1C1LP0DN25 315 aa19.5■□□□□ 0.71
VPS28-206ENST00000526734 HPDP32754 393 aaPredicted RBP19.5■□□□□ 0.71
VPS28-206ENST00000526734 AGTR2P50052 363 aa19.5■□□□□ 0.71
VPS28-206ENST00000526734 MLLT10P55197 1068 aa19.5■□□□□ 0.71
VPS28-206ENST00000526734 PRSS41Q7RTY9 318 aa19.5■□□□□ 0.71
VPS28-206ENST00000526734 PARP9Q8IXQ6 854 aa19.5■□□□□ 0.71
VPS28-206ENST00000526734 KRT78Q8N1N4 520 aa19.5■□□□□ 0.71
VPS28-206ENST00000526734 GALNT11Q8NCW6 608 aa19.5■□□□□ 0.71
VPS28-206ENST00000526734 ZNF740Q8NDX6 193 aa19.5■□□□□ 0.71
VPS28-206ENST00000526734 C8orf44Q96CB5 159 aa19.5■□□□□ 0.71
VPS28-206ENST00000526734 MACROD1Q9BQ69 325 aa19.5■□□□□ 0.71
VPS28-206ENST00000526734 WDR77Q9BQA1 342 aaPredicted RBP19.5■□□□□ 0.71
VPS28-206ENST00000526734 TUBB6Q9BUF5 446 aa19.5■□□□□ 0.71
VPS28-206ENST00000526734 SLC6A16Q9GZN6 736 aa19.5■□□□□ 0.71
VPS28-206ENST00000526734 VN1R1Q9GZP7 353 aa19.5■□□□□ 0.71
VPS28-206ENST00000526734 NT5DC2Q9H857 520 aa19.5■□□□□ 0.71
VPS28-206ENST00000526734 DNAJC11Q9NVH1 559 aa19.5■□□□□ 0.71
VPS28-206ENST00000526734 HCN3Q9P1Z3 774 aa19.5■□□□□ 0.71
VPS28-206ENST00000526734 COPG2Q9UBF2 871 aa19.5■□□□□ 0.71
VPS28-206ENST00000526734 RNF112Q9ULX5 631 aa19.5■□□□□ 0.71
VPS28-206ENST00000526734 CCDC88CQ9P219 2028 aa19.5■□□□□ 0.71
VPS28-206ENST00000526734 SGK494L7N484 410 aa19.49■□□□□ 0.71
VPS28-206ENST00000526734 GALR3O60755 368 aaPredicted RBP19.49■□□□□ 0.71
VPS28-206ENST00000526734 RDH16O75452 317 aa19.49■□□□□ 0.71
VPS28-206ENST00000526734 STK16O75716 305 aa19.49■□□□□ 0.71
VPS28-206ENST00000526734 SERPIND1P05546 499 aa19.49■□□□□ 0.71
VPS28-206ENST00000526734 SERPINA6P08185 405 aa19.49■□□□□ 0.71
VPS28-206ENST00000526734 LTA4HP09960 611 aaKnown RBP19.49■□□□□ 0.71
VPS28-206ENST00000526734 SLC35E2BP0CK96 405 aa19.49■□□□□ 0.71
VPS28-206ENST00000526734 IGFBP7Q16270 282 aa19.49■□□□□ 0.71
VPS28-206ENST00000526734 MINDY4Q4G0A6 757 aa19.49■□□□□ 0.71
VPS28-206ENST00000526734 CRB2Q5IJ48 1285 aa19.49■□□□□ 0.71
VPS28-206ENST00000526734 COLEC12Q5KU26 742 aa19.49■□□□□ 0.71
VPS28-206ENST00000526734 ISLR2Q6UXK2 745 aa19.49■□□□□ 0.71
VPS28-206ENST00000526734 SLCO4C1Q6ZQN7 724 aa19.49■□□□□ 0.71
VPS28-206ENST00000526734 Q6ZS92 163 aa19.49■□□□□ 0.71
VPS28-206ENST00000526734 PDSS2Q86YH6 399 aa19.49■□□□□ 0.71
VPS28-206ENST00000526734 Q8NA96 180 aa19.49■□□□□ 0.71
VPS28-206ENST00000526734 LMF1Q96S06 567 aa19.49■□□□□ 0.71
VPS28-206ENST00000526734 FMO2Q99518 471 aa19.49■□□□□ 0.71
VPS28-206ENST00000526734 TMEM79Q9BSE2 394 aa19.49■□□□□ 0.71
VPS28-206ENST00000526734 MFRPQ9BY79 579 aa19.49■□□□□ 0.71
VPS28-206ENST00000526734 FUT8Q9BYC5 575 aa19.49■□□□□ 0.71
VPS28-206ENST00000526734 SLC29A3Q9BZD2 475 aa19.49■□□□□ 0.71
VPS28-206ENST00000526734 ILKAPQ9H0C8 392 aaPredicted RBP19.49■□□□□ 0.71
VPS28-206ENST00000526734 SPNS1Q9H2V7 528 aa19.49■□□□□ 0.71
VPS28-206ENST00000526734 ACSS3Q9H6R3 686 aa19.49■□□□□ 0.71
VPS28-206ENST00000526734 NUDT4Q9NZJ9 180 aa19.49■□□□□ 0.71
VPS28-206ENST00000526734 CD274Q9NZQ7 290 aa19.49■□□□□ 0.71
VPS28-206ENST00000526734 PLAAQ9Y263 795 aa19.49■□□□□ 0.71
VPS28-206ENST00000526734 ACOT9Q9Y305 439 aa19.49■□□□□ 0.71
VPS28-206ENST00000526734 MYO18BQ8IUG5 2567 aa19.48■□□□□ 0.71
VPS28-206ENST00000526734 TNRC6AQ8NDV7 1962 aaKnown RBP19.48■□□□□ 0.71
VPS28-206ENST00000526734 UBR5O95071 2799 aaPredicted RBP19.48■□□□□ 0.71
VPS28-206ENST00000526734 A0A087X1B8 175 aa19.48■□□□□ 0.71
VPS28-206ENST00000526734 NCF1BA6NI72 391 aaPredicted RBP19.48■□□□□ 0.71
VPS28-206ENST00000526734 NCF1CA8MVU1 366 aaPredicted RBP19.48■□□□□ 0.71
VPS28-206ENST00000526734 MASP2O00187 686 aa19.48■□□□□ 0.71
VPS28-206ENST00000526734 CLGNO14967 610 aa19.48■□□□□ 0.71
VPS28-206ENST00000526734 VPS4BO75351 444 aa19.48■□□□□ 0.71
VPS28-206ENST00000526734 NCF1P14598 390 aaPredicted RBP19.48■□□□□ 0.71
VPS28-206ENST00000526734 JAK1P23458 1154 aa19.48■□□□□ 0.71
VPS28-206ENST00000526734 STXBP1P61764 594 aaKnown RBP19.48■□□□□ 0.71
VPS28-206ENST00000526734 SNRPNP63162 240 aaKnown RBP19.48■□□□□ 0.71
VPS28-206ENST00000526734 EEF1A2Q05639 463 aaKnown RBP19.48■□□□□ 0.71
VPS28-206ENST00000526734 Q0VFX4 171 aa19.48■□□□□ 0.71
VPS28-206ENST00000526734 MFAP5Q13361 173 aa19.48■□□□□ 0.71
VPS28-206ENST00000526734 RBBP5Q15291 538 aaKnown RBP19.48■□□□□ 0.71
VPS28-206ENST00000526734 OR4D1Q15615 310 aa19.48■□□□□ 0.71
VPS28-206ENST00000526734 INPP5JQ15735 1006 aaPredicted RBP19.48■□□□□ 0.71
VPS28-206ENST00000526734 MFSD4BQ5TF39 518 aa19.48■□□□□ 0.71
VPS28-206ENST00000526734 TMIGD1Q6UXZ0 262 aa19.48■□□□□ 0.71
VPS28-206ENST00000526734 LRRC70Q7Z2Q7 622 aa19.48■□□□□ 0.71
VPS28-206ENST00000526734 SPATA6LQ8N4H0 392 aa19.48■□□□□ 0.71
VPS28-206ENST00000526734 CEP112Q8N8E3 955 aa19.48■□□□□ 0.71
VPS28-206ENST00000526734 ANKRD53Q8N9V6 530 aa19.48■□□□□ 0.71
VPS28-206ENST00000526734 TRIM44Q96DX7 344 aaPredicted RBP19.48■□□□□ 0.71
VPS28-206ENST00000526734 EFCAB11Q9BUY7 163 aa19.48■□□□□ 0.71
VPS28-206ENST00000526734 NINJ2Q9NZG7 142 aa19.48■□□□□ 0.71
VPS28-206ENST00000526734 PTBP2Q9UKA9 531 aaKnown RBP19.48■□□□□ 0.71
VPS28-206ENST00000526734 VPS4AQ9UN37 437 aa19.48■□□□□ 0.71
VPS28-206ENST00000526734 TENM4Q6N022 2769 aa19.48■□□□□ 0.71
VPS28-206ENST00000526734 KERAO60938 352 aa19.47■□□□□ 0.71
VPS28-206ENST00000526734 FAM155BO75949 473 aa19.47■□□□□ 0.71
VPS28-206ENST00000526734 PRR35P0CG20 571 aa19.47■□□□□ 0.71
VPS28-206ENST00000526734 TFEBP19484 476 aa19.47■□□□□ 0.71
VPS28-206ENST00000526734 GDF5P43026 501 aa19.47■□□□□ 0.71
VPS28-206ENST00000526734 EFTUD2Q15029 972 aaKnown RBP eCLIP19.47■□□□□ 0.712e-8■■■■■ 26.8
VPS28-206ENST00000526734 PCOLCEQ15113 449 aa19.47■□□□□ 0.71
VPS28-206ENST00000526734 PDK4Q16654 411 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms