RNA–Protein interactions for RNA: ENST00000526058.1

CCS-203, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 4

Gene CCS, Length 593 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-203ENST00000526058 B3GALT4O96024 378 aa16.08■□□□□ 0.16
CCS-203ENST00000526058 HPP00738 406 aa16.08■□□□□ 0.16
CCS-203ENST00000526058 ALPPP05187 535 aa16.08■□□□□ 0.16
CCS-203ENST00000526058 CXCR2P25025 360 aa16.08■□□□□ 0.16
CCS-203ENST00000526058 ECHS1P30084 290 aa16.08■□□□□ 0.16
CCS-203ENST00000526058 AHRP35869 848 aa16.08■□□□□ 0.16
CCS-203ENST00000526058 XCR1P46094 333 aa16.08■□□□□ 0.16
CCS-203ENST00000526058 BMPR2Q13873 1038 aa16.08■□□□□ 0.16
CCS-203ENST00000526058 RBBP5Q15291 538 aaKnown RBP16.08■□□□□ 0.16
CCS-203ENST00000526058 MROH9Q5TGP6 573 aa16.08■□□□□ 0.16
CCS-203ENST00000526058 NDUFAF7Q7L592 441 aa16.08■□□□□ 0.16
CCS-203ENST00000526058 AFAP1L2Q8N4X5 818 aa16.08■□□□□ 0.16
CCS-203ENST00000526058 OR5T3Q8NGG3 340 aa16.08■□□□□ 0.16
CCS-203ENST00000526058 NT5CQ8TCD5 201 aa16.08■□□□□ 0.16
CCS-203ENST00000526058 EXT2Q93063 718 aa16.08■□□□□ 0.16
CCS-203ENST00000526058 KIAA1191Q96A73 305 aa16.08■□□□□ 0.16
CCS-203ENST00000526058 THOC3Q96J01 351 aaKnown RBP16.08■□□□□ 0.16
CCS-203ENST00000526058 AIF1LQ9BQI0 150 aa16.08■□□□□ 0.16
CCS-203ENST00000526058 LHPPQ9H008 270 aa16.08■□□□□ 0.16
CCS-203ENST00000526058 ALG9Q9H6U8 611 aa16.08■□□□□ 0.16
CCS-203ENST00000526058 IGSF5Q9NSI5 407 aa16.08■□□□□ 0.16
CCS-203ENST00000526058 WWOXQ9NZC7 414 aa16.08■□□□□ 0.16
CCS-203ENST00000526058 CD274Q9NZQ7 290 aa16.08■□□□□ 0.16
CCS-203ENST00000526058 MTRF1LQ9UGC7 380 aaKnown RBP16.08■□□□□ 0.16
CCS-203ENST00000526058 RNF112Q9ULX5 631 aa16.08■□□□□ 0.16
CCS-203ENST00000526058 SHANK1Q9Y566 2161 aa16.08■□□□□ 0.16
CCS-203ENST00000526058 LRRK2Q5S007 2527 aa16.08■□□□□ 0.16
CCS-203ENST00000526058 IGHV1-45A0A0A0MS14 117 aa16.07■□□□□ 0.16
CCS-203ENST00000526058 NSG1A0A0A6YYJ2 146 aa16.07■□□□□ 0.16
CCS-203ENST00000526058 KLHL41O60662 606 aa16.07■□□□□ 0.16
CCS-203ENST00000526058 ZNF888P0CJ79 500 aaPredicted RBP16.07■□□□□ 0.16
CCS-203ENST00000526058 C1GALT1C1LP0DN25 315 aa16.07■□□□□ 0.16
CCS-203ENST00000526058 GNAZP19086 355 aa16.07■□□□□ 0.16
CCS-203ENST00000526058 CRABP2P29373 138 aa16.07■□□□□ 0.16
CCS-203ENST00000526058 GGT5P36269 586 aa16.07■□□□□ 0.16
CCS-203ENST00000526058 HNF4AP41235 474 aa16.07■□□□□ 0.16
CCS-203ENST00000526058 HSPA7P48741 367 aa16.07■□□□□ 0.16
CCS-203ENST00000526058 RGS1Q08116 209 aa16.07■□□□□ 0.16
CCS-203ENST00000526058 HYAL2Q12891 473 aa16.07■□□□□ 0.16
CCS-203ENST00000526058 CDC16Q13042 620 aa16.07■□□□□ 0.16
CCS-203ENST00000526058 HERC3Q15034 1050 aa16.07■□□□□ 0.16
CCS-203ENST00000526058 UAP1Q16222 522 aaPredicted RBP16.07■□□□□ 0.16
CCS-203ENST00000526058 PLEKHN1Q494U1 663 aaPredicted RBP16.07■□□□□ 0.16
CCS-203ENST00000526058 DEFB134Q4QY38 66 aa16.07■□□□□ 0.16
CCS-203ENST00000526058 PRR30Q53SZ7 412 aaPredicted RBP16.07■□□□□ 0.16
CCS-203ENST00000526058 MFSD4BQ5TF39 518 aa16.07■□□□□ 0.16
CCS-203ENST00000526058 SULT1C3Q6IMI6 304 aa16.07■□□□□ 0.16
CCS-203ENST00000526058 TMEM205Q6UW68 189 aa16.07■□□□□ 0.16
CCS-203ENST00000526058 IGFL3Q6UXB1 125 aa16.07■□□□□ 0.16
CCS-203ENST00000526058 SLCO4C1Q6ZQN7 724 aa16.07■□□□□ 0.16
CCS-203ENST00000526058 ISCA2Q86U28 154 aa16.07■□□□□ 0.16
CCS-203ENST00000526058 RELL1Q8IUW5 271 aa16.07■□□□□ 0.16
CCS-203ENST00000526058 TCAIMQ8N3R3 496 aa16.07■□□□□ 0.16
CCS-203ENST00000526058 KIF18AQ8NI77 898 aa16.07■□□□□ 0.16
CCS-203ENST00000526058 PNPLA2Q96AD5 504 aa16.07■□□□□ 0.16
CCS-203ENST00000526058 CYTH2Q99418 400 aa16.07■□□□□ 0.16
CCS-203ENST00000526058 VN1R1Q9GZP7 353 aa16.07■□□□□ 0.16
CCS-203ENST00000526058 AICDAQ9GZX7 198 aa16.07■□□□□ 0.16
CCS-203ENST00000526058 CDC42EP4Q9H3Q1 356 aaKnown RBP16.07■□□□□ 0.16
CCS-203ENST00000526058 KLHL31Q9H511 634 aa16.07■□□□□ 0.16
CCS-203ENST00000526058 SLAMF7Q9NQ25 335 aa16.07■□□□□ 0.16
CCS-203ENST00000526058 HECTD1Q9ULT8 2610 aa16.07■□□□□ 0.16
CCS-203ENST00000526058 A0A1W2PQ72 361 aa16.06■□□□□ 0.16
CCS-203ENST00000526058 GALR3O60755 368 aaPredicted RBP16.06■□□□□ 0.16
CCS-203ENST00000526058 PRAMEF4O60810 478 aa16.06■□□□□ 0.16
CCS-203ENST00000526058 IPO13O94829 963 aaKnown RBP16.06■□□□□ 0.16
CCS-203ENST00000526058 ACSL3O95573 720 aa16.06■□□□□ 0.16
CCS-203ENST00000526058 CELA2AP08217 269 aa16.06■□□□□ 0.16
CCS-203ENST00000526058 C8orf89P0DMQ9 161 aa16.06■□□□□ 0.16
CCS-203ENST00000526058 ALOX12P18054 663 aa16.06■□□□□ 0.16
CCS-203ENST00000526058 TFEBP19484 476 aa16.06■□□□□ 0.16
CCS-203ENST00000526058 PHBP35232 272 aa16.06■□□□□ 0.16
CCS-203ENST00000526058 OLR1P78380 273 aa16.06■□□□□ 0.16
CCS-203ENST00000526058 IRF9Q00978 393 aa16.06■□□□□ 0.16
CCS-203ENST00000526058 SLBPQ14493 270 aaKnown RBP eCLIP16.06■□□□□ 0.16
CCS-203ENST00000526058 PCOLCEQ15113 449 aa16.06■□□□□ 0.16
CCS-203ENST00000526058 MINDY4Q4G0A6 757 aa16.06■□□□□ 0.16
CCS-203ENST00000526058 GLE1Q53GS7 698 aaKnown RBP16.06■□□□□ 0.16
CCS-203ENST00000526058 CDKL4Q5MAI5 379 aa16.06■□□□□ 0.16
CCS-203ENST00000526058 AGAP7PQ5VUJ5 663 aa16.06■□□□□ 0.16
CCS-203ENST00000526058 IRAK1BP1Q5VVH5 260 aa16.06■□□□□ 0.16
CCS-203ENST00000526058 PRAMEF9Q5VWM5 478 aa16.06■□□□□ 0.16
CCS-203ENST00000526058 LANCL3Q6ZV70 420 aa16.06■□□□□ 0.16
CCS-203ENST00000526058 TBC1D1Q86TI0 1168 aaPredicted RBP16.06■□□□□ 0.16
CCS-203ENST00000526058 PDPRQ8NCN5 879 aa16.06■□□□□ 0.16
CCS-203ENST00000526058 CPT1CQ8TCG5 803 aa16.06■□□□□ 0.16
CCS-203ENST00000526058 UTP15Q8TED0 518 aaKnown RBP16.06■□□□□ 0.16
CCS-203ENST00000526058 CREB3L4Q8TEY5 395 aa16.06■□□□□ 0.16
CCS-203ENST00000526058 NXNL1Q96CM4 212 aa16.06■□□□□ 0.16
CCS-203ENST00000526058 PEX11GQ96HA9 241 aa16.06■□□□□ 0.16
CCS-203ENST00000526058 AGAP4Q96P64 663 aa16.06■□□□□ 0.16
CCS-203ENST00000526058 FMO2Q99518 471 aa16.06■□□□□ 0.16
CCS-203ENST00000526058 RBCK1Q9BYM8 510 aa16.06■□□□□ 0.16
CCS-203ENST00000526058 SLC6A16Q9GZN6 736 aa16.06■□□□□ 0.16
CCS-203ENST00000526058 ACSS3Q9H6R3 686 aa16.06■□□□□ 0.16
CCS-203ENST00000526058 NMRAL1Q9HBL8 299 aa16.06■□□□□ 0.16
CCS-203ENST00000526058 DNAJC11Q9NVH1 559 aa16.06■□□□□ 0.16
CCS-203ENST00000526058 PTBP2Q9UKA9 531 aaKnown RBP16.06■□□□□ 0.16
CCS-203ENST00000526058 ASB1Q9Y576 335 aa16.06■□□□□ 0.16
CCS-203ENST00000526058 CSAG2Q9Y5P2 127 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms