RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 RNF6Q9Y252 685 aa6.6□□□□□ -1.35
NEDD8-203ENST00000524927 PCM1Q15154 2024 aa6.6□□□□□ -1.35
NEDD8-203ENST00000524927 SEC16AO15027 2179 aa6.59□□□□□ -1.35
NEDD8-203ENST00000524927 DOCK10Q96BY6 2186 aa6.59□□□□□ -1.35
NEDD8-203ENST00000524927 CCDC151A5D8V7 595 aa6.59□□□□□ -1.35
NEDD8-203ENST00000524927 LILRA5A6NI73 299 aa6.59□□□□□ -1.35
NEDD8-203ENST00000524927 TGFB1I1O43294 461 aa6.59□□□□□ -1.35
NEDD8-203ENST00000524927 SNAP91O60641 907 aa6.59□□□□□ -1.35
NEDD8-203ENST00000524927 KLF7O75840 302 aaPredicted RBP6.59□□□□□ -1.35
NEDD8-203ENST00000524927 TK1P04183 234 aa6.59□□□□□ -1.35
NEDD8-203ENST00000524927 POLBP06746 335 aa6.59□□□□□ -1.35
NEDD8-203ENST00000524927 NPSP0C0P6 89 aa6.59□□□□□ -1.35
NEDD8-203ENST00000524927 ABOP16442 354 aa6.59□□□□□ -1.35
NEDD8-203ENST00000524927 GRIA3P42263 894 aa6.59□□□□□ -1.35
NEDD8-203ENST00000524927 GNPDA1P46926 289 aa6.59□□□□□ -1.35
NEDD8-203ENST00000524927 ARG2P78540 354 aa6.59□□□□□ -1.35
NEDD8-203ENST00000524927 TXNL4AP83876 142 aaKnown RBP6.59□□□□□ -1.35
NEDD8-203ENST00000524927 CACNG1Q06432 222 aa6.59□□□□□ -1.35
NEDD8-203ENST00000524927 NFATC2Q13469 925 aa6.59□□□□□ -1.35
NEDD8-203ENST00000524927 CBFBQ13951 182 aa6.59□□□□□ -1.35
NEDD8-203ENST00000524927 FAM174BQ3ZCQ3 159 aa6.59□□□□□ -1.35
NEDD8-203ENST00000524927 IGFL4Q6B9Z1 124 aa6.59□□□□□ -1.35
NEDD8-203ENST00000524927 TMEM211Q6ICI0 200 aa6.59□□□□□ -1.35
NEDD8-203ENST00000524927 SCARA5Q6ZMJ2 495 aa6.59□□□□□ -1.35
NEDD8-203ENST00000524927 GPBP1Q86WP2 473 aa6.59□□□□□ -1.35
NEDD8-203ENST00000524927 TMEM126BQ8IUX1 230 aa6.59□□□□□ -1.35
NEDD8-203ENST00000524927 VRK3Q8IV63 474 aa6.59□□□□□ -1.35
NEDD8-203ENST00000524927 DIS3L2Q8IYB7 885 aaKnown RBP6.59□□□□□ -1.35
NEDD8-203ENST00000524927 SCML4Q8N228 414 aa6.59□□□□□ -1.35
NEDD8-203ENST00000524927 FAM71DQ8N9W8 422 aa6.59□□□□□ -1.35
NEDD8-203ENST00000524927 DCAF4L2Q8NA75 395 aa6.59□□□□□ -1.35
NEDD8-203ENST00000524927 AVL9Q8NBF6 648 aa6.59□□□□□ -1.35
NEDD8-203ENST00000524927 SIDT2Q8NBJ9 832 aaKnown RBP6.59□□□□□ -1.35
NEDD8-203ENST00000524927 OR8K5Q8NH50 307 aa6.59□□□□□ -1.35
NEDD8-203ENST00000524927 FAM222BQ8WU58 562 aa6.59□□□□□ -1.35
NEDD8-203ENST00000524927 FAR2Q96K12 515 aa6.59□□□□□ -1.35
NEDD8-203ENST00000524927 ZNF514Q96K75 400 aaPredicted RBP6.59□□□□□ -1.35
NEDD8-203ENST00000524927 COQ10AQ96MF6 247 aa6.59□□□□□ -1.35
NEDD8-203ENST00000524927 SERPINB11Q96P15 392 aa6.59□□□□□ -1.35
NEDD8-203ENST00000524927 TGM7Q96PF1 710 aa6.59□□□□□ -1.35
NEDD8-203ENST00000524927 PSMB7Q99436 277 aa6.59□□□□□ -1.35
NEDD8-203ENST00000524927 CINPQ9BW66 212 aaPredicted RBP6.59□□□□□ -1.35
NEDD8-203ENST00000524927 DNAI2Q9GZS0 605 aa6.59□□□□□ -1.35
NEDD8-203ENST00000524927 WDR26Q9H7D7 661 aa6.59□□□□□ -1.35
NEDD8-203ENST00000524927 YAE1D1Q9NRH1 226 aa6.59□□□□□ -1.35
NEDD8-203ENST00000524927 DUSP22Q9NRW4 184 aa6.59□□□□□ -1.35
NEDD8-203ENST00000524927 UBE2J1Q9Y385 318 aaPredicted RBP6.59□□□□□ -1.35
NEDD8-203ENST00000524927 VWFP04275 2813 aa6.59□□□□□ -1.35
NEDD8-203ENST00000524927 DYTNA2CJ06 578 aa6.58□□□□□ -1.36
NEDD8-203ENST00000524927 C9J4A7 227 aa6.58□□□□□ -1.36
NEDD8-203ENST00000524927 CD5LO43866 347 aa6.58□□□□□ -1.36
NEDD8-203ENST00000524927 ESRRBO95718 433 aa6.58□□□□□ -1.36
NEDD8-203ENST00000524927 MOCS2O96007 188 aaPredicted RBP6.58□□□□□ -1.36
NEDD8-203ENST00000524927 JCHAINP01591 159 aa6.58□□□□□ -1.36
NEDD8-203ENST00000524927 APOEP02649 317 aa6.58□□□□□ -1.36
NEDD8-203ENST00000524927 DLATP10515 647 aaKnown RBP6.58□□□□□ -1.36
NEDD8-203ENST00000524927 FOLR1P15328 257 aa6.58□□□□□ -1.36
NEDD8-203ENST00000524927 RORAP35398 523 aa6.58□□□□□ -1.36
NEDD8-203ENST00000524927 DNA2P51530 1060 aa6.58□□□□□ -1.36
NEDD8-203ENST00000524927 SLC8A3P57103 927 aa6.58□□□□□ -1.36
NEDD8-203ENST00000524927 EEFSECP57772 596 aaKnown RBP6.58□□□□□ -1.36
NEDD8-203ENST00000524927 SLC20A2Q08357 652 aa6.58□□□□□ -1.36
NEDD8-203ENST00000524927 ELP6Q0PNE2 266 aa6.58□□□□□ -1.36
NEDD8-203ENST00000524927 INCA1Q0VD86 236 aa6.58□□□□□ -1.36
NEDD8-203ENST00000524927 ZRSR1Q15695 479 aaKnown RBP6.58□□□□□ -1.36
NEDD8-203ENST00000524927 GALNTL6Q49A17 601 aa6.58□□□□□ -1.36
NEDD8-203ENST00000524927 PCID2Q5JVF3 399 aa6.58□□□□□ -1.36
NEDD8-203ENST00000524927 OTUD1Q5VV17 481 aaPredicted RBP6.58□□□□□ -1.36
NEDD8-203ENST00000524927 LIPNQ5VXI9 398 aa6.58□□□□□ -1.36
NEDD8-203ENST00000524927 RETSATQ6NUM9 610 aa6.58□□□□□ -1.36
NEDD8-203ENST00000524927 ANKRD16Q6P6B7 361 aa6.58□□□□□ -1.36
NEDD8-203ENST00000524927 BLOC1S2Q6QNY1 142 aa6.58□□□□□ -1.36
NEDD8-203ENST00000524927 SLC9B2Q86UD5 537 aa6.58□□□□□ -1.36
NEDD8-203ENST00000524927 LRRTM4Q86VH4 590 aa6.58□□□□□ -1.36
NEDD8-203ENST00000524927 CBWD2Q8IUF1 395 aa6.58□□□□□ -1.36
NEDD8-203ENST00000524927 LRRC17Q8N6Y2 441 aa6.58□□□□□ -1.36
NEDD8-203ENST00000524927 C4orf32Q8N8J7 132 aa6.58□□□□□ -1.36
NEDD8-203ENST00000524927 CEP70Q8NHQ1 597 aa6.58□□□□□ -1.36
NEDD8-203ENST00000524927 PIGTQ969N2 578 aa6.58□□□□□ -1.36
NEDD8-203ENST00000524927 VOPP1Q96AW1 172 aa6.58□□□□□ -1.36
NEDD8-203ENST00000524927 ZNF274Q96GC6 653 aaPredicted RBP6.58□□□□□ -1.36
NEDD8-203ENST00000524927 SLC41A2Q96JW4 573 aa6.58□□□□□ -1.36
NEDD8-203ENST00000524927 BTN2A3PQ96KV6 586 aa6.58□□□□□ -1.36
NEDD8-203ENST00000524927 TWNKQ96RR1 684 aa6.58□□□□□ -1.36
NEDD8-203ENST00000524927 MAP3K3Q99759 626 aa6.58□□□□□ -1.36
NEDD8-203ENST00000524927 PRMT1Q99873 361 aaKnown RBP6.58□□□□□ -1.36
NEDD8-203ENST00000524927 MLPHQ9BV36 600 aaPredicted RBP6.58□□□□□ -1.36
NEDD8-203ENST00000524927 LHPPQ9H008 270 aa6.58□□□□□ -1.36
NEDD8-203ENST00000524927 TKTL2Q9H0I9 626 aa6.58□□□□□ -1.36
NEDD8-203ENST00000524927 CUEDC2Q9H467 287 aa6.58□□□□□ -1.36
NEDD8-203ENST00000524927 UCK1Q9HA47 277 aa6.58□□□□□ -1.36
NEDD8-203ENST00000524927 SAP30LQ9HAJ7 183 aa6.58□□□□□ -1.36
NEDD8-203ENST00000524927 LRRC4Q9HBW1 653 aa6.58□□□□□ -1.36
NEDD8-203ENST00000524927 OGFRQ9NZT2 677 aa6.58□□□□□ -1.36
NEDD8-203ENST00000524927 SEMA5BQ9P283 1151 aa6.58□□□□□ -1.36
NEDD8-203ENST00000524927 XPO7Q9UIA9 1087 aaKnown RBP6.58□□□□□ -1.36
NEDD8-203ENST00000524927 BAG5Q9UL15 447 aa6.58□□□□□ -1.36
NEDD8-203ENST00000524927 CRYL1Q9Y2S2 319 aa6.58□□□□□ -1.36
NEDD8-203ENST00000524927 ANKRD36A6QL64 1941 aa6.57□□□□□ -1.36
NEDD8-203ENST00000524927 LINC00473A8K010 186 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms