RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 LINC00523Q86TU6 105 aa10.89□□□□□ -0.67
SDCBP-211ENST00000523441 PDSS2Q86YH6 399 aa10.89□□□□□ -0.67
SDCBP-211ENST00000523441 CYP4Z2PQ8N1L4 340 aa10.89□□□□□ -0.67
SDCBP-211ENST00000523441 TMEM156Q8N614 296 aa10.89□□□□□ -0.67
SDCBP-211ENST00000523441 KCT2Q8NC54 265 aa10.89□□□□□ -0.67
SDCBP-211ENST00000523441 C18orf12Q96KH6 178 aa10.89□□□□□ -0.67
SDCBP-211ENST00000523441 DNAJC7Q99615 494 aa10.89□□□□□ -0.67
SDCBP-211ENST00000523441 DEFB126Q9BYW3 111 aa10.89□□□□□ -0.67
SDCBP-211ENST00000523441 RHBGQ9H310 441 aa10.89□□□□□ -0.67
SDCBP-211ENST00000523441 DMRT3Q9NQL9 472 aa10.89□□□□□ -0.67
SDCBP-211ENST00000523441 CRIM1Q9NZV1 1036 aa10.89□□□□□ -0.67
SDCBP-211ENST00000523441 KCMF1Q9P0J7 381 aa10.89□□□□□ -0.67
SDCBP-211ENST00000523441 GALPQ9UBC7 116 aa10.89□□□□□ -0.67
SDCBP-211ENST00000523441 FBXW2Q9UKT8 454 aa10.89□□□□□ -0.67
SDCBP-211ENST00000523441 A0A0G2JNJ9 132 aa10.88□□□□□ -0.67
SDCBP-211ENST00000523441 PINLYPA6NC86 204 aa10.88□□□□□ -0.67
SDCBP-211ENST00000523441 FCHO1O14526 889 aa10.88□□□□□ -0.67
SDCBP-211ENST00000523441 PSMD3O43242 534 aa10.88□□□□□ -0.67
SDCBP-211ENST00000523441 DNAJB6O75190 326 aa10.88□□□□□ -0.67
SDCBP-211ENST00000523441 TJP3O95049 919 aa10.88□□□□□ -0.67
SDCBP-211ENST00000523441 SERPIND1P05546 499 aa10.88□□□□□ -0.67
SDCBP-211ENST00000523441 F7P08709 466 aaPredicted RBP10.88□□□□□ -0.67
SDCBP-211ENST00000523441 CHRM3P20309 590 aa10.88□□□□□ -0.67
SDCBP-211ENST00000523441 ADRA1DP25100 572 aa10.88□□□□□ -0.67
SDCBP-211ENST00000523441 ZFP36L2P47974 494 aaKnown RBP10.88□□□□□ -0.67
SDCBP-211ENST00000523441 TTPAP49638 278 aa10.88□□□□□ -0.67
SDCBP-211ENST00000523441 HLCSP50747 726 aa10.88□□□□□ -0.67
SDCBP-211ENST00000523441 MLF1P58340 268 aa10.88□□□□□ -0.67
SDCBP-211ENST00000523441 PPIAP62937 165 aaKnown RBP10.88□□□□□ -0.67
SDCBP-211ENST00000523441 CRADDP78560 199 aa10.88□□□□□ -0.67
SDCBP-211ENST00000523441 KLHL38Q2WGJ6 581 aa10.88□□□□□ -0.67
SDCBP-211ENST00000523441 P3H1Q32P28 736 aa10.88□□□□□ -0.67
SDCBP-211ENST00000523441 CTSL3PQ5NE16 218 aa10.88□□□□□ -0.67
SDCBP-211ENST00000523441 CHSY3Q70JA7 882 aa10.88□□□□□ -0.67
SDCBP-211ENST00000523441 VN1R4Q7Z5H5 301 aa10.88□□□□□ -0.67
SDCBP-211ENST00000523441 PRUNE1Q86TP1 453 aa10.88□□□□□ -0.67
SDCBP-211ENST00000523441 POGLUT1Q8NBL1 392 aa10.88□□□□□ -0.67
SDCBP-211ENST00000523441 FBXO15Q8NCQ5 510 aaPredicted RBP10.88□□□□□ -0.67
SDCBP-211ENST00000523441 PPHLN1Q8NEY8 458 aaKnown RBP10.88□□□□□ -0.67
SDCBP-211ENST00000523441 ELP5Q8TE02 316 aa10.88□□□□□ -0.67
SDCBP-211ENST00000523441 MRFAP1L1Q96HT8 127 aa10.88□□□□□ -0.67
SDCBP-211ENST00000523441 PTCHD1Q96NR3 888 aa10.88□□□□□ -0.67
SDCBP-211ENST00000523441 ALPK1Q96QP1 1244 aa10.88□□□□□ -0.67
SDCBP-211ENST00000523441 P2RY12Q9H244 342 aa10.88□□□□□ -0.67
SDCBP-211ENST00000523441 LIN28AQ9H9Z2 209 aaKnown RBP10.88□□□□□ -0.67
SDCBP-211ENST00000523441 SLC24A3Q9HC58 644 aa10.88□□□□□ -0.67
SDCBP-211ENST00000523441 CHRAC1Q9NRG0 131 aa10.88□□□□□ -0.67
SDCBP-211ENST00000523441 RASSF1Q9NS23 344 aa10.88□□□□□ -0.67
SDCBP-211ENST00000523441 Q9UFV3 132 aa10.88□□□□□ -0.67
SDCBP-211ENST00000523441 ERVK-11Q9UQG0 969 aa10.88□□□□□ -0.67
SDCBP-211ENST00000523441 CRYL1Q9Y2S2 319 aa10.88□□□□□ -0.67
SDCBP-211ENST00000523441 TCAF1Q9Y4C2 921 aa10.88□□□□□ -0.67
SDCBP-211ENST00000523441 LIPGQ9Y5X9 500 aa10.88□□□□□ -0.67
SDCBP-211ENST00000523441 ARHGAP21Q5T5U3 1957 aa10.87□□□□□ -0.67
SDCBP-211ENST00000523441 TRBV11-1A0A0K0K1C0 115 aa10.87□□□□□ -0.67
SDCBP-211ENST00000523441 SYCE3A1L190 88 aa10.87□□□□□ -0.67
SDCBP-211ENST00000523441 SMAD7O15105 426 aaKnown RBP10.87□□□□□ -0.67
SDCBP-211ENST00000523441 KPNA5O15131 536 aa10.87□□□□□ -0.67
SDCBP-211ENST00000523441 SLC16A8O95907 504 aa10.87□□□□□ -0.67
SDCBP-211ENST00000523441 CATP04040 527 aaKnown RBP10.87□□□□□ -0.67
SDCBP-211ENST00000523441 TPM1P09493 284 aa10.87□□□□□ -0.67
SDCBP-211ENST00000523441 GLI4P10075 376 aa10.87□□□□□ -0.67
SDCBP-211ENST00000523441 MAOAP21397 527 aa10.87□□□□□ -0.67
SDCBP-211ENST00000523441 ACVR2AP27037 513 aa10.87□□□□□ -0.67
SDCBP-211ENST00000523441 COILP38432 576 aaPredicted RBP10.87□□□□□ -0.67
SDCBP-211ENST00000523441 CETN2P41208 172 aa10.87□□□□□ -0.67
SDCBP-211ENST00000523441 SESN2P58004 480 aaPredicted RBP10.87□□□□□ -0.67
SDCBP-211ENST00000523441 COPS2P61201 443 aa10.87□□□□□ -0.67
SDCBP-211ENST00000523441 KCNJ11Q14654 390 aa10.87□□□□□ -0.67
SDCBP-211ENST00000523441 PAOXQ6QHF9 649 aa10.87□□□□□ -0.67
SDCBP-211ENST00000523441 CES3Q6UWW8 571 aa10.87□□□□□ -0.67
SDCBP-211ENST00000523441 C16orf47Q6ZP98 133 aaPredicted RBP10.87□□□□□ -0.67
SDCBP-211ENST00000523441 CLEC17AQ6ZS10 378 aa10.87□□□□□ -0.67
SDCBP-211ENST00000523441 SLC26A11Q86WA9 606 aa10.87□□□□□ -0.67
SDCBP-211ENST00000523441 KLHDC8BQ8IXV7 354 aa10.87□□□□□ -0.67
SDCBP-211ENST00000523441 MYRIPQ8NFW9 859 aa10.87□□□□□ -0.67
SDCBP-211ENST00000523441 ZNF480Q8WV37 535 aa10.87□□□□□ -0.67
SDCBP-211ENST00000523441 SMC6Q96SB8 1091 aa10.87□□□□□ -0.67
SDCBP-211ENST00000523441 TTYH2Q9BSA4 534 aa10.87□□□□□ -0.67
SDCBP-211ENST00000523441 EXO5Q9H790 373 aa10.87□□□□□ -0.67
SDCBP-211ENST00000523441 ETNK1Q9HBU6 452 aa10.87□□□□□ -0.67
SDCBP-211ENST00000523441 EDARQ9UNE0 448 aa10.87□□□□□ -0.67
SDCBP-211ENST00000523441 SH2B3Q9UQQ2 575 aa10.87□□□□□ -0.67
SDCBP-211ENST00000523441 FN1P02751 2386 aaKnown RBP10.86□□□□□ -0.67
SDCBP-211ENST00000523441 A0A0G2JMM0 328 aa10.86□□□□□ -0.67
SDCBP-211ENST00000523441 A0A1W2PPB8 328 aa10.86□□□□□ -0.67
SDCBP-211ENST00000523441 A0A1W2PRS3 328 aa10.86□□□□□ -0.67
SDCBP-211ENST00000523441 KIR3DP1A8MWS1 328 aa10.86□□□□□ -0.67
SDCBP-211ENST00000523441 MAGEB17A8MXT2 336 aa10.86□□□□□ -0.67
SDCBP-211ENST00000523441 E5RI56 91 aa10.86□□□□□ -0.67
SDCBP-211ENST00000523441 MATN4O95460 622 aa10.86□□□□□ -0.67
SDCBP-211ENST00000523441 LY6G6DO95868 133 aa10.86□□□□□ -0.67
SDCBP-211ENST00000523441 IFNB1P01574 187 aa10.86□□□□□ -0.67
SDCBP-211ENST00000523441 RAF1P04049 648 aa10.86□□□□□ -0.67
SDCBP-211ENST00000523441 TPM3P06753 285 aa10.86□□□□□ -0.67
SDCBP-211ENST00000523441 FHP07954 510 aa10.86□□□□□ -0.67
SDCBP-211ENST00000523441 PSMA3P25788 255 aa10.86□□□□□ -0.67
SDCBP-211ENST00000523441 CTNNA1P35221 906 aaKnown RBP10.86□□□□□ -0.67
SDCBP-211ENST00000523441 ADH7P40394 386 aa10.86□□□□□ -0.67
SDCBP-211ENST00000523441 BTG2P78543 158 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms