RNA–Protein interactions for RNA: ENST00000522136.5

CLK4-210, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,955 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-210ENST00000522136 KCT2Q8NC54 265 aa12.78□□□□□ -0.36
CLK4-210ENST00000522136 TRPV3Q8NET8 790 aa12.78□□□□□ -0.36
CLK4-210ENST00000522136 TTLQ8NG68 377 aa12.78□□□□□ -0.36
CLK4-210ENST00000522136 CEP70Q8NHQ1 597 aa12.78□□□□□ -0.36
CLK4-210ENST00000522136 ACTRT2Q8TDY3 377 aa12.78□□□□□ -0.36
CLK4-210ENST00000522136 TM4SF19Q96DZ7 209 aa12.78□□□□□ -0.36
CLK4-210ENST00000522136 CCT7Q99832 543 aa12.78□□□□□ -0.36
CLK4-210ENST00000522136 ZNF768Q9H5H4 540 aaKnown RBP12.78□□□□□ -0.36
CLK4-210ENST00000522136 LRTM1Q9HBL6 345 aa12.78□□□□□ -0.36
CLK4-210ENST00000522136 PFDN4Q9NQP4 134 aa12.78□□□□□ -0.36
CLK4-210ENST00000522136 HEY2Q9UBP5 337 aa12.78□□□□□ -0.36
CLK4-210ENST00000522136 ADGRE2Q9UHX3 823 aa12.78□□□□□ -0.36
CLK4-210ENST00000522136 ARL2BPQ9Y2Y0 163 aa12.78□□□□□ -0.36
CLK4-210ENST00000522136 KIF26BQ2KJY2 2108 aa12.77□□□□□ -0.36
CLK4-210ENST00000522136 ZNF292O60281 2723 aa12.77□□□□□ -0.36
CLK4-210ENST00000522136 A0A0G2JN53 185 aa12.77□□□□□ -0.37
CLK4-210ENST00000522136 C4orf51C9J302 202 aa12.77□□□□□ -0.37
CLK4-210ENST00000522136 GFRA3O60609 400 aa12.77□□□□□ -0.37
CLK4-210ENST00000522136 SEC22BO75396 215 aa12.77□□□□□ -0.37
CLK4-210ENST00000522136 PRR35P0CG20 571 aa12.77□□□□□ -0.37
CLK4-210ENST00000522136 HSD3B1P14060 373 aa12.77□□□□□ -0.37
CLK4-210ENST00000522136 NELFEP18615 380 aaKnown RBP12.77□□□□□ -0.37
CLK4-210ENST00000522136 PTX3P26022 381 aaPredicted RBP12.77□□□□□ -0.37
CLK4-210ENST00000522136 HSD3B2P26439 372 aa12.77□□□□□ -0.37
CLK4-210ENST00000522136 TERF2Q15554 542 aa12.77□□□□□ -0.37
CLK4-210ENST00000522136 GPR19Q15760 415 aa12.77□□□□□ -0.37
CLK4-210ENST00000522136 ATP6AP1LQ52LC2 224 aa12.77□□□□□ -0.37
CLK4-210ENST00000522136 ZC3H12BQ5HYM0 836 aaKnown RBP12.77□□□□□ -0.37
CLK4-210ENST00000522136 TOR1AIP1Q5JTV8 583 aa12.77□□□□□ -0.37
CLK4-210ENST00000522136 DEPDC1Q5TB30 811 aa12.77□□□□□ -0.37
CLK4-210ENST00000522136 KHDRBS2Q5VWX1 349 aaKnown RBP12.77□□□□□ -0.37
CLK4-210ENST00000522136 RIPOR1Q6ZS17 1223 aa12.77□□□□□ -0.37
CLK4-210ENST00000522136 CARFQ8N187 725 aa12.77□□□□□ -0.37
CLK4-210ENST00000522136 D2HGDHQ8N465 521 aa12.77□□□□□ -0.37
CLK4-210ENST00000522136 CCDC197Q8NCU1 140 aa12.77□□□□□ -0.37
CLK4-210ENST00000522136 RERGQ96A58 199 aaPredicted RBP12.77□□□□□ -0.37
CLK4-210ENST00000522136 CMTM7Q96FZ5 175 aa12.77□□□□□ -0.37
CLK4-210ENST00000522136 DPYSL5Q9BPU6 564 aa12.77□□□□□ -0.37
CLK4-210ENST00000522136 C1orf50Q9BV19 199 aa12.77□□□□□ -0.37
CLK4-210ENST00000522136 SORBS1Q9BX66 1292 aaKnown RBP12.77□□□□□ -0.37
CLK4-210ENST00000522136 LRIT2A6NDA9 550 aa12.76□□□□□ -0.37
CLK4-210ENST00000522136 RTCAO00442 366 aaKnown RBP12.76□□□□□ -0.37
CLK4-210ENST00000522136 RFPL3O75679 317 aa12.76□□□□□ -0.37
CLK4-210ENST00000522136 B3GALT4O96024 378 aa12.76□□□□□ -0.37
CLK4-210ENST00000522136 ALDOCP09972 364 aaKnown RBP12.76□□□□□ -0.37
CLK4-210ENST00000522136 LBPP18428 481 aa12.76□□□□□ -0.37
CLK4-210ENST00000522136 NCF2P19878 526 aaPredicted RBP12.76□□□□□ -0.37
CLK4-210ENST00000522136 PDX1P52945 283 aa12.76□□□□□ -0.37
CLK4-210ENST00000522136 LIMK1P53667 647 aa12.76□□□□□ -0.37
CLK4-210ENST00000522136 RPL38P63173 70 aaKnown RBP12.76□□□□□ -0.37
CLK4-210ENST00000522136 TBL3Q12788 808 aaKnown RBP12.76□□□□□ -0.37
CLK4-210ENST00000522136 KIAA0040Q15053 153 aa12.76□□□□□ -0.37
CLK4-210ENST00000522136 WASHC2DQ5SRD0 308 aa12.76□□□□□ -0.37
CLK4-210ENST00000522136 C10orf62Q5T681 223 aaPredicted RBP12.76□□□□□ -0.37
CLK4-210ENST00000522136 UBE3DQ7Z6J8 389 aa12.76□□□□□ -0.37
CLK4-210ENST00000522136 SLCO6A1Q86UG4 719 aa12.76□□□□□ -0.37
CLK4-210ENST00000522136 CACNA2D3Q8IZS8 1091 aa12.76□□□□□ -0.37
CLK4-210ENST00000522136 C1orf52Q8N6N3 182 aaKnown RBP12.76□□□□□ -0.37
CLK4-210ENST00000522136 FNDC5Q8NAU1 212 aa12.76□□□□□ -0.37
CLK4-210ENST00000522136 WDR48Q8TAF3 677 aa12.76□□□□□ -0.37
CLK4-210ENST00000522136 THAP11Q96EK4 314 aa12.76□□□□□ -0.37
CLK4-210ENST00000522136 PPP3R2Q96LZ3 170 aa12.76□□□□□ -0.37
CLK4-210ENST00000522136 CATSPER2Q96P56 530 aa12.76□□□□□ -0.37
CLK4-210ENST00000522136 SERPINI1Q99574 410 aa12.76□□□□□ -0.37
CLK4-210ENST00000522136 CCDC28BQ9BUN5 200 aa12.76□□□□□ -0.37
CLK4-210ENST00000522136 SPRTNQ9H040 489 aaPredicted RBP12.76□□□□□ -0.37
CLK4-210ENST00000522136 C1orf109Q9NX04 203 aa12.76□□□□□ -0.37
CLK4-210ENST00000522136 PLCL2Q9UPR0 1127 aa12.76□□□□□ -0.37
CLK4-210ENST00000522136 SPAARA0A1B0GVQ0 90 aa12.76□□□□□ -0.37
CLK4-210ENST00000522136 TOX3O15405 576 aaPredicted RBP12.76□□□□□ -0.37
CLK4-210ENST00000522136 VPS4BO75351 444 aa12.76□□□□□ -0.37
CLK4-210ENST00000522136 RSL1D1O76021 490 aaKnown RBP12.76□□□□□ -0.37
CLK4-210ENST00000522136 GBAP04062 536 aa12.76□□□□□ -0.37
CLK4-210ENST00000522136 SERPINA6P08185 405 aa12.76□□□□□ -0.37
CLK4-210ENST00000522136 ANKRD34CP0C6C1 535 aa12.76□□□□□ -0.37
CLK4-210ENST00000522136 SERPINB1P30740 379 aa12.76□□□□□ -0.37
CLK4-210ENST00000522136 PLA2G16P53816 162 aa12.76□□□□□ -0.37
CLK4-210ENST00000522136 INSM1Q01101 510 aaPredicted RBP12.76□□□□□ -0.37
CLK4-210ENST00000522136 ZFP36L1Q07352 338 aaKnown RBP12.76□□□□□ -0.37
CLK4-210ENST00000522136 CLPPQ16740 277 aaPredicted RBP12.76□□□□□ -0.37
CLK4-210ENST00000522136 DHRS13Q6UX07 377 aa12.76□□□□□ -0.37
CLK4-210ENST00000522136 CHSY3Q70JA7 882 aa12.76□□□□□ -0.37
CLK4-210ENST00000522136 ZFAND4Q86XD8 727 aa12.76□□□□□ -0.37
CLK4-210ENST00000522136 KMT5CQ86Y97 462 aa12.76□□□□□ -0.37
CLK4-210ENST00000522136 HOMEZQ8IX15 550 aa12.76□□□□□ -0.37
CLK4-210ENST00000522136 CSNK1A1LQ8N752 337 aa12.76□□□□□ -0.37
CLK4-210ENST00000522136 NT5CQ8TCD5 201 aa12.76□□□□□ -0.37
CLK4-210ENST00000522136 CHTF18Q8WVB6 975 aa12.76□□□□□ -0.37
CLK4-210ENST00000522136 MS4A6EQ96DS6 147 aa12.76□□□□□ -0.37
CLK4-210ENST00000522136 SLC45A3Q96JT2 553 aa12.76□□□□□ -0.37
CLK4-210ENST00000522136 SLC6A16Q9GZN6 736 aa12.76□□□□□ -0.37
CLK4-210ENST00000522136 REXO4Q9GZR2 422 aaKnown RBP12.76□□□□□ -0.37
CLK4-210ENST00000522136 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.76□□□□□ -0.37
CLK4-210ENST00000522136 PPT2Q9UMR5 302 aa12.76□□□□□ -0.37
CLK4-210ENST00000522136 MRPS2Q9Y399 296 aaKnown RBP12.76□□□□□ -0.37
CLK4-210ENST00000522136 POLR3HQ9Y535 204 aaPredicted RBP12.76□□□□□ -0.37
CLK4-210ENST00000522136 PLPP1O14494 284 aa12.75□□□□□ -0.37
CLK4-210ENST00000522136 MAP3K7O43318 606 aa12.75□□□□□ -0.37
CLK4-210ENST00000522136 SLC35G6P0C7Q6 338 aa12.75□□□□□ -0.37
CLK4-210ENST00000522136 PRPH2P23942 346 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms