RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 BANF1O75531 89 aa14.94□□□□□ -0.02
RAB40C-202ENST00000509637 TSPAN12O95859 305 aa14.94□□□□□ -0.02
RAB40C-202ENST00000509637 KRT14P02533 472 aa14.94□□□□□ -0.02
RAB40C-202ENST00000509637 SP1P08047 785 aa14.94□□□□□ -0.02
RAB40C-202ENST00000509637 CDKN2DP55273 166 aa14.94□□□□□ -0.02
RAB40C-202ENST00000509637 ALDH6A1Q02252 535 aaKnown RBP14.94□□□□□ -0.02
RAB40C-202ENST00000509637 ABRAXAS2Q15018 415 aa14.94□□□□□ -0.02
RAB40C-202ENST00000509637 MEP1AQ16819 746 aa14.94□□□□□ -0.02
RAB40C-202ENST00000509637 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.94□□□□□ -0.02
RAB40C-202ENST00000509637 SLC25A25Q6KCM7 469 aa14.94□□□□□ -0.02
RAB40C-202ENST00000509637 CAPN13Q6MZZ7 669 aaPredicted RBP14.94□□□□□ -0.02
RAB40C-202ENST00000509637 CASC4Q6P4E1 433 aa14.94□□□□□ -0.02
RAB40C-202ENST00000509637 PAQR3Q6TCH7 311 aa14.94□□□□□ -0.02
RAB40C-202ENST00000509637 ASPGQ86U10 573 aa14.94□□□□□ -0.02
RAB40C-202ENST00000509637 MARVELD2Q8N4S9 558 aa14.94□□□□□ -0.02
RAB40C-202ENST00000509637 CPSF7Q8N684 471 aaKnown RBP14.94□□□□□ -0.02
RAB40C-202ENST00000509637 MFSD9Q8NBP5 474 aa14.94□□□□□ -0.02
RAB40C-202ENST00000509637 NFAM1Q8NET5 270 aaPredicted RBP14.94□□□□□ -0.02
RAB40C-202ENST00000509637 OR4K1Q8NGD4 311 aa14.94□□□□□ -0.02
RAB40C-202ENST00000509637 SUN3Q8TAQ9 357 aa14.94□□□□□ -0.02
RAB40C-202ENST00000509637 SLC13A3Q8WWT9 602 aa14.94□□□□□ -0.02
RAB40C-202ENST00000509637 PYCR2Q96C36 320 aa14.94□□□□□ -0.02
RAB40C-202ENST00000509637 MS4A14Q96JA4 679 aa14.94□□□□□ -0.02
RAB40C-202ENST00000509637 EBNA1BP2Q99848 306 aaKnown RBP14.94□□□□□ -0.02
RAB40C-202ENST00000509637 UTP23Q9BRU9 249 aaKnown RBP14.94□□□□□ -0.02
RAB40C-202ENST00000509637 TSGA10Q9BZW7 698 aa14.94□□□□□ -0.02
RAB40C-202ENST00000509637 CCDC177Q9NQR7 707 aaPredicted RBP14.94□□□□□ -0.02
RAB40C-202ENST00000509637 ZKSCAN5Q9Y2L8 839 aa14.94□□□□□ -0.02
RAB40C-202ENST00000509637 SDR42E2A6NKP2 422 aa14.93□□□□□ -0.02
RAB40C-202ENST00000509637 ZNF839A8K0R7 811 aa14.93□□□□□ -0.02
RAB40C-202ENST00000509637 MAGEB17A8MXT2 336 aa14.93□□□□□ -0.02
RAB40C-202ENST00000509637 CHST10O43529 356 aa14.93□□□□□ -0.02
RAB40C-202ENST00000509637 CLDN14O95500 239 aa14.93□□□□□ -0.02
RAB40C-202ENST00000509637 CYC1P08574 325 aa14.93□□□□□ -0.02
RAB40C-202ENST00000509637 ENO3P13929 434 aaPredicted RBP14.93□□□□□ -0.02
RAB40C-202ENST00000509637 AGAP20933 346 aa14.93□□□□□ -0.02
RAB40C-202ENST00000509637 TPP2P29144 1249 aaPredicted RBP14.93□□□□□ -0.02
RAB40C-202ENST00000509637 PTGER1P34995 402 aa14.93□□□□□ -0.02
RAB40C-202ENST00000509637 AGTR2P50052 363 aa14.93□□□□□ -0.02
RAB40C-202ENST00000509637 HYAL2Q12891 473 aa14.93□□□□□ -0.02
RAB40C-202ENST00000509637 NSDHLQ15738 373 aa14.93□□□□□ -0.02
RAB40C-202ENST00000509637 LONRF1Q17RB8 773 aa14.93□□□□□ -0.02
RAB40C-202ENST00000509637 TTLL9Q3SXZ7 439 aa14.93□□□□□ -0.02
RAB40C-202ENST00000509637 HSP90AA5PQ58FG0 334 aa14.93□□□□□ -0.02
RAB40C-202ENST00000509637 CATSPEREQ5SY80 951 aa14.93□□□□□ -0.02
RAB40C-202ENST00000509637 CAMKVQ8NCB2 501 aa14.93□□□□□ -0.02
RAB40C-202ENST00000509637 MCUQ8NE86 351 aa14.93□□□□□ -0.02
RAB40C-202ENST00000509637 AGAP11Q8TF27 550 aa14.93□□□□□ -0.02
RAB40C-202ENST00000509637 ALKBH8Q96BT7 664 aaKnown RBP14.93□□□□□ -0.02
RAB40C-202ENST00000509637 THAP11Q96EK4 314 aa14.93□□□□□ -0.02
RAB40C-202ENST00000509637 ENKD1Q9H0I2 346 aa14.93□□□□□ -0.02
RAB40C-202ENST00000509637 ANKHQ9HCJ1 492 aa14.93□□□□□ -0.02
RAB40C-202ENST00000509637 LZTFL1Q9NQ48 299 aa14.93□□□□□ -0.02
RAB40C-202ENST00000509637 C20orf96Q9NUD7 363 aaPredicted RBP14.93□□□□□ -0.02
RAB40C-202ENST00000509637 UTP6Q9NYH9 597 aaKnown RBP14.93□□□□□ -0.02
RAB40C-202ENST00000509637 TEKT2Q9UIF3 430 aa14.93□□□□□ -0.02
RAB40C-202ENST00000509637 CLDN16Q9Y5I7 305 aa14.93□□□□□ -0.02
RAB40C-202ENST00000509637 SLC22A7Q9Y694 548 aa14.93□□□□□ -0.02
RAB40C-202ENST00000509637 TACC2O95359 2948 aa14.93□□□□□ -0.02
RAB40C-202ENST00000509637 GALR3O60755 368 aaPredicted RBP14.92□□□□□ -0.02
RAB40C-202ENST00000509637 EEF1DP29692 281 aaKnown RBP14.92□□□□□ -0.02
RAB40C-202ENST00000509637 CDC25BP30305 580 aa14.92□□□□□ -0.02
RAB40C-202ENST00000509637 OR4D2P58180 307 aa14.92□□□□□ -0.02
RAB40C-202ENST00000509637 RBPJQ06330 500 aa14.92□□□□□ -0.02
RAB40C-202ENST00000509637 THOC5Q13769 683 aaKnown RBP14.92□□□□□ -0.02
RAB40C-202ENST00000509637 EXT1Q16394 746 aa14.92□□□□□ -0.02
RAB40C-202ENST00000509637 KRTCAP3Q53RY4 240 aa14.92□□□□□ -0.02
RAB40C-202ENST00000509637 UGT3A1Q6NUS8 523 aa14.92□□□□□ -0.02
RAB40C-202ENST00000509637 LCTLQ6UWM7 567 aa14.92□□□□□ -0.02
RAB40C-202ENST00000509637 RPS19BP1Q86WX3 136 aaKnown RBP14.92□□□□□ -0.02
RAB40C-202ENST00000509637 IGDCC3Q8IVU1 814 aa14.92□□□□□ -0.02
RAB40C-202ENST00000509637 NAT8LQ8N9F0 302 aa14.92□□□□□ -0.02
RAB40C-202ENST00000509637 ABHD11Q8NFV4 315 aa14.92□□□□□ -0.02
RAB40C-202ENST00000509637 TREX2Q9BQ50 279 aaPredicted RBP14.92□□□□□ -0.02
RAB40C-202ENST00000509637 SARGQ9BW04 601 aa14.92□□□□□ -0.02
RAB40C-202ENST00000509637 KLHL31Q9H511 634 aa14.92□□□□□ -0.02
RAB40C-202ENST00000509637 TRIM45Q9H8W5 580 aaPredicted RBP14.92□□□□□ -0.02
RAB40C-202ENST00000509637 NECTIN3Q9NQS3 549 aa14.92□□□□□ -0.02
RAB40C-202ENST00000509637 IARS2Q9NSE4 1012 aaKnown RBP14.92□□□□□ -0.02
RAB40C-202ENST00000509637 LRFN1Q9P244 771 aa14.92□□□□□ -0.02
RAB40C-202ENST00000509637 C19orf25Q9UFG5 118 aaPredicted RBP14.92□□□□□ -0.02
RAB40C-202ENST00000509637 ZNF223Q9UK11 482 aaPredicted RBP14.92□□□□□ -0.02
RAB40C-202ENST00000509637 IGKV3D-11A0A0A0MRZ8 115 aa14.91□□□□□ -0.02
RAB40C-202ENST00000509637 NME2P1O60361 137 aa14.91□□□□□ -0.02
RAB40C-202ENST00000509637 B4GALT2O60909 372 aa14.91□□□□□ -0.02
RAB40C-202ENST00000509637 SMIM10L1P0DMW3 83 aa14.91□□□□□ -0.02
RAB40C-202ENST00000509637 ESRRAP11474 423 aaPredicted RBP14.91□□□□□ -0.02
RAB40C-202ENST00000509637 MLNP12872 115 aa14.91□□□□□ -0.02
RAB40C-202ENST00000509637 PAMP19021 973 aa14.91□□□□□ -0.02
RAB40C-202ENST00000509637 NME2P22392 152 aa14.91□□□□□ -0.02
RAB40C-202ENST00000509637 HRH2P25021 359 aa14.91□□□□□ -0.02
RAB40C-202ENST00000509637 RFC3P40938 356 aa14.91□□□□□ -0.02
RAB40C-202ENST00000509637 MLF1P58340 268 aa14.91□□□□□ -0.02
RAB40C-202ENST00000509637 AP2B1P63010 937 aa14.91□□□□□ -0.02
RAB40C-202ENST00000509637 OC90Q02509 493 aaPredicted RBP14.91□□□□□ -0.02
RAB40C-202ENST00000509637 ACTN3Q08043 901 aaPredicted RBP14.91□□□□□ -0.02
RAB40C-202ENST00000509637 DHX9Q08211 1270 aaKnown RBP14.91□□□□□ -0.02
RAB40C-202ENST00000509637 MAPKAPK3Q16644 382 aa14.91□□□□□ -0.02
RAB40C-202ENST00000509637 DEFB134Q4QY38 66 aa14.91□□□□□ -0.02
RAB40C-202ENST00000509637 MSS51Q4VC12 460 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms