RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 ZNF473Q8WTR7 871 aaKnown RBP12.23□□□□□ -0.45
TCOF1-210ENST00000506767 SREK1Q8WXA9 508 aaKnown RBP12.23□□□□□ -0.45
TCOF1-210ENST00000506767 FGF11Q92914 225 aa12.23□□□□□ -0.45
TCOF1-210ENST00000506767 REPS1Q96D71 796 aa12.23□□□□□ -0.45
TCOF1-210ENST00000506767 SMIM10Q96HG1 83 aa12.23□□□□□ -0.45
TCOF1-210ENST00000506767 NDC1Q9BTX1 674 aa12.23□□□□□ -0.45
TCOF1-210ENST00000506767 NLNQ9BYT8 704 aa12.23□□□□□ -0.45
TCOF1-210ENST00000506767 DRC3Q9H069 523 aa12.23□□□□□ -0.45
TCOF1-210ENST00000506767 MID1IP1Q9NPA3 183 aa12.23□□□□□ -0.45
TCOF1-210ENST00000506767 IRAK4Q9NWZ3 460 aa12.23□□□□□ -0.45
TCOF1-210ENST00000506767 PSD3Q9NYI0 1048 aa12.23□□□□□ -0.45
TCOF1-210ENST00000506767 DHCR7Q9UBM7 475 aaKnown RBP12.23□□□□□ -0.45
TCOF1-210ENST00000506767 ADGRE2Q9UHX3 823 aa12.23□□□□□ -0.45
TCOF1-210ENST00000506767 PPT2Q9UMR5 302 aa12.23□□□□□ -0.45
TCOF1-210ENST00000506767 SLC22A7Q9Y694 548 aa12.23□□□□□ -0.45
TCOF1-210ENST00000506767 SPTBP11277 2137 aa12.23□□□□□ -0.45
TCOF1-210ENST00000506767 TEX51A0A1B0GUA7 166 aa12.22□□□□□ -0.45
TCOF1-210ENST00000506767 LRIT2A6NDA9 550 aa12.22□□□□□ -0.45
TCOF1-210ENST00000506767 STMND1H3BQB6 276 aa12.22□□□□□ -0.45
TCOF1-210ENST00000506767 MEN1O00255 615 aa12.22□□□□□ -0.45
TCOF1-210ENST00000506767 FOXE1O00358 373 aaPredicted RBP12.22□□□□□ -0.45
TCOF1-210ENST00000506767 DSCR3O14972 297 aa12.22□□□□□ -0.45
TCOF1-210ENST00000506767 FOXS1O43638 330 aa12.22□□□□□ -0.45
TCOF1-210ENST00000506767 TLX3O43711 291 aaPredicted RBP12.22□□□□□ -0.45
TCOF1-210ENST00000506767 SERPINE1P05121 402 aa12.22□□□□□ -0.45
TCOF1-210ENST00000506767 ENO1P06733 434 aaKnown RBP12.22□□□□□ -0.45
TCOF1-210ENST00000506767 CAPN1P07384 714 aa12.22□□□□□ -0.45
TCOF1-210ENST00000506767 ITGAXP20702 1163 aa12.22□□□□□ -0.45
TCOF1-210ENST00000506767 ARL1P40616 181 aaPredicted RBP12.22□□□□□ -0.45
TCOF1-210ENST00000506767 PPP2R2AP63151 447 aa12.22□□□□□ -0.45
TCOF1-210ENST00000506767 CYP4F2P78329 520 aa12.22□□□□□ -0.45
TCOF1-210ENST00000506767 RGS1Q08116 209 aa12.22□□□□□ -0.45
TCOF1-210ENST00000506767 RCN2Q14257 317 aa12.22□□□□□ -0.45
TCOF1-210ENST00000506767 CHI3L2Q15782 390 aa12.22□□□□□ -0.45
TCOF1-210ENST00000506767 MUM1Q2TAK8 710 aa12.22□□□□□ -0.45
TCOF1-210ENST00000506767 ARL13AQ5H913 290 aaPredicted RBP12.22□□□□□ -0.45
TCOF1-210ENST00000506767 C10orf62Q5T681 223 aaPredicted RBP12.22□□□□□ -0.45
TCOF1-210ENST00000506767 FRG2Q64ET8 278 aa12.22□□□□□ -0.45
TCOF1-210ENST00000506767 C6orf15Q6UXA7 325 aaPredicted RBP12.22□□□□□ -0.45
TCOF1-210ENST00000506767 UNQ6494/PRO21346Q6UXR6 183 aa12.22□□□□□ -0.45
TCOF1-210ENST00000506767 TTLL10Q6ZVT0 673 aa12.22□□□□□ -0.45
TCOF1-210ENST00000506767 MYLK4Q86YV6 388 aaPredicted RBP12.22□□□□□ -0.45
TCOF1-210ENST00000506767 AFAP1L2Q8N4X5 818 aa12.22□□□□□ -0.45
TCOF1-210ENST00000506767 GALNT6Q8NCL4 622 aa12.22□□□□□ -0.45
TCOF1-210ENST00000506767 HUS1BQ8NHY5 278 aa12.22□□□□□ -0.45
TCOF1-210ENST00000506767 SNIP1Q8TAD8 396 aaKnown RBP12.22□□□□□ -0.45
TCOF1-210ENST00000506767 PROKR1Q8TCW9 393 aa12.22□□□□□ -0.45
TCOF1-210ENST00000506767 MGARPQ8TDB4 240 aa12.22□□□□□ -0.45
TCOF1-210ENST00000506767 CLIP3Q96DZ5 547 aa12.22□□□□□ -0.45
TCOF1-210ENST00000506767 RNF31Q96EP0 1072 aa12.22□□□□□ -0.45
TCOF1-210ENST00000506767 MVB12AQ96EY5 273 aa12.22□□□□□ -0.45
TCOF1-210ENST00000506767 GBP5Q96PP8 586 aa12.22□□□□□ -0.45
TCOF1-210ENST00000506767 FRG2BQ96QU4 278 aa12.22□□□□□ -0.45
TCOF1-210ENST00000506767 MS4A8Q9BY19 250 aa12.22□□□□□ -0.45
TCOF1-210ENST00000506767 SLC29A3Q9BZD2 475 aa12.22□□□□□ -0.45
TCOF1-210ENST00000506767 KLHL31Q9H511 634 aa12.22□□□□□ -0.45
TCOF1-210ENST00000506767 CCDC86Q9H6F5 360 aaKnown RBP12.22□□□□□ -0.45
TCOF1-210ENST00000506767 AKIRIN1Q9H9L7 192 aaPredicted RBP12.22□□□□□ -0.45
TCOF1-210ENST00000506767 TNFRSF12AQ9NP84 129 aa12.22□□□□□ -0.45
TCOF1-210ENST00000506767 MED4Q9NPJ6 270 aa12.22□□□□□ -0.45
TCOF1-210ENST00000506767 RALYQ9UKM9 306 aaKnown RBP12.22□□□□□ -0.45
TCOF1-210ENST00000506767 MRPS2Q9Y399 296 aaKnown RBP12.22□□□□□ -0.45
TCOF1-210ENST00000506767 A0A1B0GX78 115 aa12.21□□□□□ -0.45
TCOF1-210ENST00000506767 SERTM1A2A2V5 107 aa12.21□□□□□ -0.45
TCOF1-210ENST00000506767 TMEM114B3SHH9 223 aa12.21□□□□□ -0.45
TCOF1-210ENST00000506767 RAD1O60671 282 aa12.21□□□□□ -0.45
TCOF1-210ENST00000506767 SERPIND1P05546 499 aa12.21□□□□□ -0.45
TCOF1-210ENST00000506767 CHRNGP07510 517 aa12.21□□□□□ -0.45
TCOF1-210ENST00000506767 FGF4P08620 206 aa12.21□□□□□ -0.45
TCOF1-210ENST00000506767 LIPCP11150 499 aa12.21□□□□□ -0.45
TCOF1-210ENST00000506767 PCNAP12004 261 aa12.21□□□□□ -0.45
TCOF1-210ENST00000506767 BGNP21810 368 aa12.21□□□□□ -0.45
TCOF1-210ENST00000506767 GRK2P25098 689 aa12.21□□□□□ -0.45
TCOF1-210ENST00000506767 HNRNPH1P31943 449 aaKnown RBP12.21□□□□□ -0.45
TCOF1-210ENST00000506767 NEK2P51955 445 aa12.21□□□□□ -0.45
TCOF1-210ENST00000506767 FOXA1P55317 472 aa12.21□□□□□ -0.45
TCOF1-210ENST00000506767 NDUFA9Q16795 377 aa12.21□□□□□ -0.45
TCOF1-210ENST00000506767 FAM219BQ5XKK7 198 aa12.21□□□□□ -0.45
TCOF1-210ENST00000506767 PRMT9Q6P2P2 845 aa12.21□□□□□ -0.45
TCOF1-210ENST00000506767 CUZD1Q86UP6 607 aa12.21□□□□□ -0.45
TCOF1-210ENST00000506767 NLGN4XQ8N0W4 816 aa12.21□□□□□ -0.45
TCOF1-210ENST00000506767 RNF175Q8N4F7 328 aa12.21□□□□□ -0.45
TCOF1-210ENST00000506767 DTWD1Q8N5C7 304 aa12.21□□□□□ -0.45
TCOF1-210ENST00000506767 ESX1Q8N693 406 aa12.21□□□□□ -0.45
TCOF1-210ENST00000506767 CDYL2Q8N8U2 506 aa12.21□□□□□ -0.45
TCOF1-210ENST00000506767 NLGN4YQ8NFZ3 816 aaPredicted RBP12.21□□□□□ -0.45
TCOF1-210ENST00000506767 METTL6Q8TCB7 284 aa12.21□□□□□ -0.45
TCOF1-210ENST00000506767 UTP15Q8TED0 518 aaKnown RBP12.21□□□□□ -0.45
TCOF1-210ENST00000506767 NKD1Q969G9 470 aa12.21□□□□□ -0.45
TCOF1-210ENST00000506767 MS4A6EQ96DS6 147 aa12.21□□□□□ -0.45
TCOF1-210ENST00000506767 MTERF1Q99551 399 aaKnown RBP12.21□□□□□ -0.45
TCOF1-210ENST00000506767 PAIP2Q9BPZ3 127 aaKnown RBP12.21□□□□□ -0.45
TCOF1-210ENST00000506767 DPH2Q9BQC3 489 aaPredicted RBP12.21□□□□□ -0.45
TCOF1-210ENST00000506767 SLC7A5P2Q9GIP4 190 aa12.21□□□□□ -0.45
TCOF1-210ENST00000506767 C20orf27Q9GZN8 174 aa12.21□□□□□ -0.45
TCOF1-210ENST00000506767 EML4Q9HC35 981 aaKnown RBP12.21□□□□□ -0.45
TCOF1-210ENST00000506767 LHX9Q9NQ69 397 aa12.21□□□□□ -0.45
TCOF1-210ENST00000506767 DMRT3Q9NQL9 472 aa12.21□□□□□ -0.45
TCOF1-210ENST00000506767 TXLNGQ9NUQ3 528 aa12.21□□□□□ -0.45
TCOF1-210ENST00000506767 SNX6Q9UNH7 406 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms