RNA–Protein interactions for RNA: ENST00000505657.1

CHD1-203, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-203ENST00000505657 DHRS11Q6UWP2 260 aa3.19□□□□□ -1.9
CHD1-203ENST00000505657 CHMP1BQ7LBR1 199 aa3.19□□□□□ -1.9
CHD1-203ENST00000505657 RIT1Q92963 219 aa3.19□□□□□ -1.9
CHD1-203ENST00000505657 RAB3IPQ96QF0 476 aaPredicted RBP3.19□□□□□ -1.9
CHD1-203ENST00000505657 ALKBH7Q9BT30 221 aaPredicted RBP3.19□□□□□ -1.9
CHD1-203ENST00000505657 INPP5KQ9BT40 448 aa3.19□□□□□ -1.9
CHD1-203ENST00000505657 UBXN6Q9BZV1 441 aa3.19□□□□□ -1.9
CHD1-203ENST00000505657 PFDN4Q9NQP4 134 aa3.19□□□□□ -1.9
CHD1-203ENST00000505657 MUTYHQ9UIF7 546 aa3.19□□□□□ -1.9
CHD1-203ENST00000505657 LNPEPQ9UIQ6 1025 aa3.19□□□□□ -1.9
CHD1-203ENST00000505657 RUVBL2Q9Y230 463 aaKnown RBP3.19□□□□□ -1.9
CHD1-203ENST00000505657 MOB4Q9Y3A3 225 aa3.19□□□□□ -1.9
CHD1-203ENST00000505657 MMP24Q9Y5R2 645 aa3.19□□□□□ -1.9
CHD1-203ENST00000505657 SPATA31D1Q6ZQQ2 1576 aa3.19□□□□□ -1.9
CHD1-203ENST00000505657 OBSCNQ5VST9 7968 aa3.18□□□□□ -1.9
CHD1-203ENST00000505657 LOC105371242A0A075B767 164 aa3.18□□□□□ -1.9
CHD1-203ENST00000505657 TRAV34A0A0B4J273 112 aa3.18□□□□□ -1.9
CHD1-203ENST00000505657 IGHV3-20A0A0C4DH32 117 aa3.18□□□□□ -1.9
CHD1-203ENST00000505657 A0A1W2PPR1 153 aa3.18□□□□□ -1.9
CHD1-203ENST00000505657 HTR3EA5X5Y0 456 aa3.18□□□□□ -1.9
CHD1-203ENST00000505657 KIF5CO60282 957 aa3.18□□□□□ -1.9
CHD1-203ENST00000505657 SELENOFO60613 162 aa3.18□□□□□ -1.9
CHD1-203ENST00000505657 SNAP91O60641 907 aa3.18□□□□□ -1.9
CHD1-203ENST00000505657 LRCH4O75427 683 aa3.18□□□□□ -1.9
CHD1-203ENST00000505657 CAPN2P17655 700 aa3.18□□□□□ -1.9
CHD1-203ENST00000505657 EDNRAP25101 427 aa3.18□□□□□ -1.9
CHD1-203ENST00000505657 SHC1P29353 583 aa3.18□□□□□ -1.9
CHD1-203ENST00000505657 PAX8Q06710 450 aa3.18□□□□□ -1.9
CHD1-203ENST00000505657 TFCP2Q12800 502 aa3.18□□□□□ -1.9
CHD1-203ENST00000505657 FAM106AQ4KMX7 169 aa3.18□□□□□ -1.9
CHD1-203ENST00000505657 ZNF542PQ5EBM4 170 aa3.18□□□□□ -1.9
CHD1-203ENST00000505657 MPP7Q5T2T1 576 aa3.18□□□□□ -1.9
CHD1-203ENST00000505657 ZNF770Q6IQ21 691 aaPredicted RBP3.18□□□□□ -1.9
CHD1-203ENST00000505657 SHQ1Q6PI26 577 aaKnown RBP3.18□□□□□ -1.9
CHD1-203ENST00000505657 SPATA21Q7Z572 469 aa3.18□□□□□ -1.9
CHD1-203ENST00000505657 GLRX5Q86SX6 157 aa3.18□□□□□ -1.9
CHD1-203ENST00000505657 PRUNE1Q86TP1 453 aa3.18□□□□□ -1.9
CHD1-203ENST00000505657 METTL4Q8N3J2 472 aa3.18□□□□□ -1.9
CHD1-203ENST00000505657 CHPT1Q8WUD6 406 aa3.18□□□□□ -1.9
CHD1-203ENST00000505657 ZMAT2Q96NC0 199 aaKnown RBP3.18□□□□□ -1.9
CHD1-203ENST00000505657 FERMT1Q9BQL6 677 aa3.18□□□□□ -1.9
CHD1-203ENST00000505657 GPATCH1Q9BRR8 931 aaKnown RBP3.18□□□□□ -1.9
CHD1-203ENST00000505657 EDEM3Q9BZQ6 932 aa3.18□□□□□ -1.9
CHD1-203ENST00000505657 C5orf66Q9H5L9 145 aa3.18□□□□□ -1.9
CHD1-203ENST00000505657 MTHFD2LQ9H903 347 aaPredicted RBP3.18□□□□□ -1.9
CHD1-203ENST00000505657 ZCCHC17Q9NP64 241 aaKnown RBP3.18□□□□□ -1.9
CHD1-203ENST00000505657 BAIAP2L1Q9UHR4 511 aa3.18□□□□□ -1.9
CHD1-203ENST00000505657 POMT1Q9Y6A1 747 aa3.18□□□□□ -1.9
CHD1-203ENST00000505657 NPHP3Q7Z494 1330 aa3.18□□□□□ -1.9
CHD1-203ENST00000505657 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.17□□□□□ -1.9
CHD1-203ENST00000505657 TMEM150CB9EJG8 249 aa3.17□□□□□ -1.9
CHD1-203ENST00000505657 HSP90AA1P07900 732 aaKnown RBP3.17□□□□□ -1.9
CHD1-203ENST00000505657 THEGLP0DJG4 465 aa3.17□□□□□ -1.9
CHD1-203ENST00000505657 OR3A1P47881 315 aa3.17□□□□□ -1.9
CHD1-203ENST00000505657 CLCN4P51793 760 aa3.17□□□□□ -1.9
CHD1-203ENST00000505657 COX10Q12887 443 aa3.17□□□□□ -1.9
CHD1-203ENST00000505657 ZNF177Q13360 481 aaPredicted RBP3.17□□□□□ -1.9
CHD1-203ENST00000505657 RAPSNQ13702 412 aa3.17□□□□□ -1.9
CHD1-203ENST00000505657 LCLAT1Q6UWP7 414 aa3.17□□□□□ -1.9
CHD1-203ENST00000505657 COX8CQ7Z4L0 72 aa3.17□□□□□ -1.9
CHD1-203ENST00000505657 GPR141Q7Z602 305 aa3.17□□□□□ -1.9
CHD1-203ENST00000505657 ZFAND4Q86XD8 727 aa3.17□□□□□ -1.9
CHD1-203ENST00000505657 CREBRFQ8IUR6 639 aa3.17□□□□□ -1.9
CHD1-203ENST00000505657 SLC22A15Q8IZD6 547 aa3.17□□□□□ -1.9
CHD1-203ENST00000505657 TDHQ8IZJ6 230 aa3.17□□□□□ -1.9
CHD1-203ENST00000505657 RPLP0P6Q8NHW5 317 aa3.17□□□□□ -1.9
CHD1-203ENST00000505657 NCOA7Q8NI08 942 aa3.17□□□□□ -1.9
CHD1-203ENST00000505657 SETD6Q8TBK2 473 aa3.17□□□□□ -1.9
CHD1-203ENST00000505657 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.17□□□□□ -1.9
CHD1-203ENST00000505657 SAP25Q8TEE9 199 aa3.17□□□□□ -1.9
CHD1-203ENST00000505657 LRRC15Q8TF66 581 aa3.17□□□□□ -1.9
CHD1-203ENST00000505657 CORO2AQ92828 525 aa3.17□□□□□ -1.9
CHD1-203ENST00000505657 CASP10Q92851 521 aa3.17□□□□□ -1.9
CHD1-203ENST00000505657 BSCL2Q96G97 398 aaPredicted RBP3.17□□□□□ -1.9
CHD1-203ENST00000505657 SOSTQ9BQB4 213 aa3.17□□□□□ -1.9
CHD1-203ENST00000505657 PYGO2Q9BRQ0 406 aa3.17□□□□□ -1.9
CHD1-203ENST00000505657 KRTAP4-3Q9BYR4 195 aa3.17□□□□□ -1.9
CHD1-203ENST00000505657 PARLQ9H300 379 aa3.17□□□□□ -1.9
CHD1-203ENST00000505657 MINDY3Q9H8M7 445 aa3.17□□□□□ -1.9
CHD1-203ENST00000505657 POLKQ9UBT6 870 aa3.17□□□□□ -1.9
CHD1-203ENST00000505657 NOCTQ9UK39 431 aaKnown RBP3.17□□□□□ -1.9
CHD1-203ENST00000505657 PLCL2Q9UPR0 1127 aa3.17□□□□□ -1.9
CHD1-203ENST00000505657 AGTPBP1Q9UPW5 1226 aa3.17□□□□□ -1.9
CHD1-203ENST00000505657 PA2G4Q9UQ80 394 aaKnown RBP3.17□□□□□ -1.9
CHD1-203ENST00000505657 ZNF510Q9Y2H8 683 aa3.17□□□□□ -1.9
CHD1-203ENST00000505657 HBS1LQ9Y450 684 aaKnown RBP3.17□□□□□ -1.9
CHD1-203ENST00000505657 TP53BP1Q12888 1972 aaPredicted RBP3.16□□□□□ -1.9
CHD1-203ENST00000505657 TRAV18A0A075B6X5 111 aa3.16□□□□□ -1.9
CHD1-203ENST00000505657 IGHV3-38A0A0C4DH36 116 aa3.16□□□□□ -1.9
CHD1-203ENST00000505657 ST8SIA3O43173 380 aa3.16□□□□□ -1.9
CHD1-203ENST00000505657 SIX3O95343 332 aaPredicted RBP3.16□□□□□ -1.9
CHD1-203ENST00000505657 MT-ND2P03891 347 aa3.16□□□□□ -1.9
CHD1-203ENST00000505657 ACADSP16219 412 aa3.16□□□□□ -1.9
CHD1-203ENST00000505657 GOT1P17174 413 aa3.16□□□□□ -1.9
CHD1-203ENST00000505657 AOC1P19801 751 aa3.16□□□□□ -1.9
CHD1-203ENST00000505657 C4BPBP20851 252 aa3.16□□□□□ -1.9
CHD1-203ENST00000505657 HOXC13P31276 330 aa3.16□□□□□ -1.9
CHD1-203ENST00000505657 TLX1P31314 330 aaPredicted RBP3.16□□□□□ -1.9
CHD1-203ENST00000505657 ETV5P41161 510 aa3.16□□□□□ -1.9
CHD1-203ENST00000505657 MS4A2Q01362 244 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms