RNA–Protein interactions for RNA: ENST00000498212.1

HMGXB4-207, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-207ENST00000498212 ZNF740Q8NDX6 193 aa8.01□□□□□ -1.13
HMGXB4-207ENST00000498212 ANKRD49Q8WVL7 239 aa8.01□□□□□ -1.13
HMGXB4-207ENST00000498212 SLC5A11Q8WWX8 675 aa8.01□□□□□ -1.13
HMGXB4-207ENST00000498212 PSMF1Q92530 271 aa8.01□□□□□ -1.13
HMGXB4-207ENST00000498212 CYTH2Q99418 400 aa8.01□□□□□ -1.13
HMGXB4-207ENST00000498212 MCMBPQ9BTE3 642 aa8.01□□□□□ -1.13
HMGXB4-207ENST00000498212 TUBB6Q9BUF5 446 aa8.01□□□□□ -1.13
HMGXB4-207ENST00000498212 SPNS1Q9H2V7 528 aa8.01□□□□□ -1.13
HMGXB4-207ENST00000498212 PELI2Q9HAT8 420 aa8.01□□□□□ -1.13
HMGXB4-207ENST00000498212 LRRC4CQ9HCJ2 640 aa8.01□□□□□ -1.13
HMGXB4-207ENST00000498212 SMYD2Q9NRG4 433 aa8.01□□□□□ -1.13
HMGXB4-207ENST00000498212 AGPAT4Q9NRZ5 378 aa8.01□□□□□ -1.13
HMGXB4-207ENST00000498212 GRHL1Q9NZI5 618 aa8.01□□□□□ -1.13
HMGXB4-207ENST00000498212 CTNNAL1Q9UBT7 734 aa8.01□□□□□ -1.13
HMGXB4-207ENST00000498212 C19orf25Q9UFG5 118 aaPredicted RBP8.01□□□□□ -1.13
HMGXB4-207ENST00000498212 ZFP69BQ9UJL9 534 aa8.01□□□□□ -1.13
HMGXB4-207ENST00000498212 SLC22A14Q9Y267 594 aa8.01□□□□□ -1.13
HMGXB4-207ENST00000498212 NTNG1Q9Y2I2 539 aa8.01□□□□□ -1.13
HMGXB4-207ENST00000498212 UTP11Q9Y3A2 253 aaKnown RBP8.01□□□□□ -1.13
HMGXB4-207ENST00000498212 NAALAD2Q9Y3Q0 740 aa8.01□□□□□ -1.13
HMGXB4-207ENST00000498212 KCNE2Q9Y6J6 123 aa8.01□□□□□ -1.13
HMGXB4-207ENST00000498212 NBASA2RRP1 2371 aa8□□□□□ -1.13
HMGXB4-207ENST00000498212 ZGRF1Q86YA3 2104 aa8□□□□□ -1.13
HMGXB4-207ENST00000498212 TCRBV9S1A1TA0A576 114 aa8□□□□□ -1.13
HMGXB4-207ENST00000498212 ANKUB1A6NFN9 424 aa8□□□□□ -1.13
HMGXB4-207ENST00000498212 URADA6NGE7 173 aa8□□□□□ -1.13
HMGXB4-207ENST00000498212 ZNF860A6NHJ4 632 aa8□□□□□ -1.13
HMGXB4-207ENST00000498212 CYSRT1A8MQ03 144 aa8□□□□□ -1.13
HMGXB4-207ENST00000498212 CXorf49A8MYA2 514 aaPredicted RBP8□□□□□ -1.13
HMGXB4-207ENST00000498212 SEMA7AO75326 666 aa8□□□□□ -1.13
HMGXB4-207ENST00000498212 SEC24DO94855 1032 aaPredicted RBP8□□□□□ -1.13
HMGXB4-207ENST00000498212 WDR47O94967 919 aa8□□□□□ -1.13
HMGXB4-207ENST00000498212 CBX6O95503 412 aa8□□□□□ -1.13
HMGXB4-207ENST00000498212 CELA2AP08217 269 aa8□□□□□ -1.13
HMGXB4-207ENST00000498212 GSTA2P09210 222 aa8□□□□□ -1.13
HMGXB4-207ENST00000498212 ITGAMP11215 1152 aa8□□□□□ -1.13
HMGXB4-207ENST00000498212 GP1BBP13224 206 aa8□□□□□ -1.13
HMGXB4-207ENST00000498212 ALOX12P18054 663 aa8□□□□□ -1.13
HMGXB4-207ENST00000498212 IL10P22301 178 aa8□□□□□ -1.13
HMGXB4-207ENST00000498212 SOX11P35716 441 aa8□□□□□ -1.13
HMGXB4-207ENST00000498212 SCTRP47872 440 aa8□□□□□ -1.13
HMGXB4-207ENST00000498212 HNMTP50135 292 aa8□□□□□ -1.13
HMGXB4-207ENST00000498212 ETF1P62495 437 aaKnown RBP8□□□□□ -1.13
HMGXB4-207ENST00000498212 SKP1P63208 163 aa8□□□□□ -1.13
HMGXB4-207ENST00000498212 REEP5Q00765 189 aa8□□□□□ -1.13
HMGXB4-207ENST00000498212 CAV1Q03135 178 aa8□□□□□ -1.13
HMGXB4-207ENST00000498212 RGS1Q08116 209 aa8□□□□□ -1.13
HMGXB4-207ENST00000498212 TSNQ15631 228 aaKnown RBP8□□□□□ -1.13
HMGXB4-207ENST00000498212 BTBD16Q32M84 506 aa8□□□□□ -1.13
HMGXB4-207ENST00000498212 NIPAL1Q6NVV3 410 aa8□□□□□ -1.13
HMGXB4-207ENST00000498212 RPUSD3Q6P087 351 aaKnown RBP8□□□□□ -1.13
HMGXB4-207ENST00000498212 SYT10Q6XYQ8 523 aa8□□□□□ -1.13
HMGXB4-207ENST00000498212 C3orf62Q6ZUJ4 267 aa8□□□□□ -1.13
HMGXB4-207ENST00000498212 LANCL3Q6ZV70 420 aa8□□□□□ -1.13
HMGXB4-207ENST00000498212 ABHD13Q7L211 337 aa8□□□□□ -1.13
HMGXB4-207ENST00000498212 CPEB2Q7Z5Q1 589 aaKnown RBP8□□□□□ -1.13
HMGXB4-207ENST00000498212 ANKRD37Q7Z713 158 aa8□□□□□ -1.13
HMGXB4-207ENST00000498212 SHISA5Q8N114 240 aa8□□□□□ -1.13
HMGXB4-207ENST00000498212 C17orf53Q8N3J3 647 aaPredicted RBP8□□□□□ -1.13
HMGXB4-207ENST00000498212 AFAP1L2Q8N4X5 818 aa8□□□□□ -1.13
HMGXB4-207ENST00000498212 CATSPER1Q8NEC5 780 aa8□□□□□ -1.13
HMGXB4-207ENST00000498212 TRPV3Q8NET8 790 aa8□□□□□ -1.13
HMGXB4-207ENST00000498212 OR1N1Q8NGS0 311 aa8□□□□□ -1.13
HMGXB4-207ENST00000498212 NT5CQ8TCD5 201 aa8□□□□□ -1.13
HMGXB4-207ENST00000498212 SSC4DQ8WTU2 575 aa8□□□□□ -1.13
HMGXB4-207ENST00000498212 HAS2Q92819 552 aa8□□□□□ -1.13
HMGXB4-207ENST00000498212 MOCOSQ96EN8 888 aa8□□□□□ -1.13
HMGXB4-207ENST00000498212 TSPAN17Q96FV3 270 aa8□□□□□ -1.13
HMGXB4-207ENST00000498212 PEX11GQ96HA9 241 aa8□□□□□ -1.13
HMGXB4-207ENST00000498212 IMMP1LQ96LU5 166 aa8□□□□□ -1.13
HMGXB4-207ENST00000498212 PSMG3-AS1Q96PY0 264 aa8□□□□□ -1.13
HMGXB4-207ENST00000498212 OR1F2PQ96R84 312 aa8□□□□□ -1.13
HMGXB4-207ENST00000498212 RBBP8Q99708 897 aa8□□□□□ -1.13
HMGXB4-207ENST00000498212 BARD1Q99728 777 aaKnown RBP8□□□□□ -1.13
HMGXB4-207ENST00000498212 CPNE1Q99829 537 aa8□□□□□ -1.13
HMGXB4-207ENST00000498212 AIF1LQ9BQI0 150 aa8□□□□□ -1.13
HMGXB4-207ENST00000498212 RBCK1Q9BYM8 510 aa8□□□□□ -1.13
HMGXB4-207ENST00000498212 PHACTR1Q9C0D0 580 aa8□□□□□ -1.13
HMGXB4-207ENST00000498212 DERL2Q9GZP9 239 aa8□□□□□ -1.13
HMGXB4-207ENST00000498212 RAB17Q9H0T7 212 aa8□□□□□ -1.13
HMGXB4-207ENST00000498212 CAB39LQ9H9S4 337 aa8□□□□□ -1.13
HMGXB4-207ENST00000498212 MTO1Q9Y2Z2 717 aaKnown RBP8□□□□□ -1.13
HMGXB4-207ENST00000498212 TRAV17A0A0B4J275 112 aa7.99□□□□□ -1.13
HMGXB4-207ENST00000498212 IGHV3-20A0A0C4DH32 117 aa7.99□□□□□ -1.13
HMGXB4-207ENST00000498212 OR2W5A6NFC9 320 aa7.99□□□□□ -1.13
HMGXB4-207ENST00000498212 NCF1BA6NI72 391 aaPredicted RBP7.99□□□□□ -1.13
HMGXB4-207ENST00000498212 FAM159BA6NKW6 160 aa7.99□□□□□ -1.13
HMGXB4-207ENST00000498212 NCF1CA8MVU1 366 aaPredicted RBP7.99□□□□□ -1.13
HMGXB4-207ENST00000498212 GALR3O60755 368 aaPredicted RBP7.99□□□□□ -1.13
HMGXB4-207ENST00000498212 CDC123O75794 336 aaPredicted RBP7.99□□□□□ -1.13
HMGXB4-207ENST00000498212 WISP3O95389 354 aaPredicted RBP7.99□□□□□ -1.13
HMGXB4-207ENST00000498212 ZNF888P0CJ79 500 aaPredicted RBP7.99□□□□□ -1.13
HMGXB4-207ENST00000498212 CCDC166P0CW27 439 aa7.99□□□□□ -1.13
HMGXB4-207ENST00000498212 NCF1P14598 390 aaPredicted RBP7.99□□□□□ -1.13
HMGXB4-207ENST00000498212 STMN1P16949 149 aa7.99□□□□□ -1.13
HMGXB4-207ENST00000498212 JAK1P23458 1154 aa7.99□□□□□ -1.13
HMGXB4-207ENST00000498212 GP5P40197 560 aa7.99□□□□□ -1.13
HMGXB4-207ENST00000498212 PLTPP55058 493 aa7.99□□□□□ -1.13
HMGXB4-207ENST00000498212 GPX6P59796 221 aa7.99□□□□□ -1.13
HMGXB4-207ENST00000498212 RHAGQ02094 409 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms