RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 MTX3Q5HYI7 312 aa9.85□□□□□ -0.83
HDAC3-214ENST00000495485 C6orf10Q5SRN2 563 aa9.85□□□□□ -0.83
HDAC3-214ENST00000495485 IRAK1BP1Q5VVH5 260 aa9.85□□□□□ -0.83
HDAC3-214ENST00000495485 ICE2Q659A1 982 aa9.85□□□□□ -0.83
HDAC3-214ENST00000495485 GALNT18Q6P9A2 607 aa9.85□□□□□ -0.83
HDAC3-214ENST00000495485 XKR5Q6UX68 686 aa9.85□□□□□ -0.83
HDAC3-214ENST00000495485 LRRC74BQ6ZQY2 392 aa9.85□□□□□ -0.83
HDAC3-214ENST00000495485 RD3Q7Z3Z2 195 aa9.85□□□□□ -0.83
HDAC3-214ENST00000495485 RETREG3Q86VR2 466 aa9.85□□□□□ -0.83
HDAC3-214ENST00000495485 SPATA24Q86W54 205 aa9.85□□□□□ -0.83
HDAC3-214ENST00000495485 AQP12AQ8IXF9 295 aa9.85□□□□□ -0.83
HDAC3-214ENST00000495485 RBM12BQ8IXT5 1001 aaKnown RBP9.85□□□□□ -0.83
HDAC3-214ENST00000495485 SRFBP1Q8NEF9 429 aaKnown RBP9.85□□□□□ -0.83
HDAC3-214ENST00000495485 BHLHE22Q8NFJ8 381 aaPredicted RBP9.85□□□□□ -0.83
HDAC3-214ENST00000495485 ABHD11Q8NFV4 315 aa9.85□□□□□ -0.83
HDAC3-214ENST00000495485 DNAJB14Q8TBM8 379 aa9.85□□□□□ -0.83
HDAC3-214ENST00000495485 OR1E3Q8WZA6 343 aa9.85□□□□□ -0.83
HDAC3-214ENST00000495485 VPS33AQ96AX1 596 aa9.85□□□□□ -0.83
HDAC3-214ENST00000495485 MTERF3Q96E29 417 aa9.85□□□□□ -0.83
HDAC3-214ENST00000495485 APIPQ96GX9 242 aa9.85□□□□□ -0.83
HDAC3-214ENST00000495485 GBP5Q96PP8 586 aa9.85□□□□□ -0.83
HDAC3-214ENST00000495485 PHOX2BQ99453 314 aa9.85□□□□□ -0.83
HDAC3-214ENST00000495485 CGREF1Q99674 301 aa9.85□□□□□ -0.83
HDAC3-214ENST00000495485 KCTD14Q9BQ13 255 aaPredicted RBP9.85□□□□□ -0.83
HDAC3-214ENST00000495485 RHBGQ9H310 441 aa9.85□□□□□ -0.83
HDAC3-214ENST00000495485 VCXQ9H320 206 aa9.85□□□□□ -0.83
HDAC3-214ENST00000495485 ALG2Q9H553 416 aa9.85□□□□□ -0.83
HDAC3-214ENST00000495485 FGF22Q9HCT0 170 aa9.85□□□□□ -0.83
HDAC3-214ENST00000495485 MRPS30Q9NP92 439 aaKnown RBP9.85□□□□□ -0.83
HDAC3-214ENST00000495485 TMEM184CQ9NVA4 438 aa9.85□□□□□ -0.83
HDAC3-214ENST00000495485 EVA1BQ9NVM1 165 aa9.85□□□□□ -0.83
HDAC3-214ENST00000495485 CIDEBQ9UHD4 219 aa9.85□□□□□ -0.83
HDAC3-214ENST00000495485 PCDHGB4Q9UN71 923 aa9.85□□□□□ -0.83
HDAC3-214ENST00000495485 SNX7Q9UNH6 387 aa9.85□□□□□ -0.83
HDAC3-214ENST00000495485 CORO2BQ9UQ03 480 aa9.85□□□□□ -0.83
HDAC3-214ENST00000495485 CFAP20Q9Y6A4 193 aaKnown RBP9.85□□□□□ -0.83
HDAC3-214ENST00000495485 CSNK1G3Q9Y6M4 447 aa9.85□□□□□ -0.83
HDAC3-214ENST00000495485 LRP4O75096 1905 aa9.84□□□□□ -0.83
HDAC3-214ENST00000495485 A0A096LPI6 279 aa9.84□□□□□ -0.83
HDAC3-214ENST00000495485 KIR2DS5A0A0G2JLQ3 304 aa9.84□□□□□ -0.83
HDAC3-214ENST00000495485 A0A0G2JNG1 304 aa9.84□□□□□ -0.83
HDAC3-214ENST00000495485 A0A1B0GTQ1 180 aa9.84□□□□□ -0.83
HDAC3-214ENST00000495485 A0A1B0GVT2 93 aa9.84□□□□□ -0.83
HDAC3-214ENST00000495485 FAM221BA6H8Z2 402 aa9.84□□□□□ -0.83
HDAC3-214ENST00000495485 PRR19A6NJB7 356 aa9.84□□□□□ -0.83
HDAC3-214ENST00000495485 KIR2DS3K7RE56 304 aa9.84□□□□□ -0.83
HDAC3-214ENST00000495485 FLRT2O43155 660 aa9.84□□□□□ -0.83
HDAC3-214ENST00000495485 PRAMEF4O60810 478 aa9.84□□□□□ -0.83
HDAC3-214ENST00000495485 GUCY1B2O75343 617 aa9.84□□□□□ -0.83
HDAC3-214ENST00000495485 F3P13726 295 aa9.84□□□□□ -0.83
HDAC3-214ENST00000495485 COX7A2P14406 83 aa9.84□□□□□ -0.83
HDAC3-214ENST00000495485 NME1P15531 152 aaKnown RBP9.84□□□□□ -0.83
HDAC3-214ENST00000495485 SDC1P18827 310 aa9.84□□□□□ -0.83
HDAC3-214ENST00000495485 XRCC1P18887 633 aaPredicted RBP9.84□□□□□ -0.83
HDAC3-214ENST00000495485 TCN1P20061 433 aaPredicted RBP9.84□□□□□ -0.83
HDAC3-214ENST00000495485 CD22P20273 847 aa9.84□□□□□ -0.83
HDAC3-214ENST00000495485 IL10P22301 178 aa9.84□□□□□ -0.83
HDAC3-214ENST00000495485 ZFP36L2P47974 494 aaKnown RBP9.84□□□□□ -0.83
HDAC3-214ENST00000495485 PTDSS1P48651 473 aaKnown RBP9.84□□□□□ -0.83
HDAC3-214ENST00000495485 SESN3P58005 492 aa9.84□□□□□ -0.83
HDAC3-214ENST00000495485 RPS13P62277 151 aaKnown RBP9.84□□□□□ -0.83
HDAC3-214ENST00000495485 TGM3Q08188 693 aa9.84□□□□□ -0.83
HDAC3-214ENST00000495485 CCNIQ14094 377 aa9.84□□□□□ -0.83
HDAC3-214ENST00000495485 PTGR1Q14914 329 aa9.84□□□□□ -0.83
HDAC3-214ENST00000495485 KIR2DS3Q14952 304 aa9.84□□□□□ -0.83
HDAC3-214ENST00000495485 KIR2DS5Q14953 304 aa9.84□□□□□ -0.83
HDAC3-214ENST00000495485 CLCA4Q14CN2 919 aa9.84□□□□□ -0.83
HDAC3-214ENST00000495485 MUM1Q2TAK8 710 aa9.84□□□□□ -0.83
HDAC3-214ENST00000495485 HLA-BQ31612 363 aa9.84□□□□□ -0.83
HDAC3-214ENST00000495485 PAGE3Q5JUK9 113 aa9.84□□□□□ -0.83
HDAC3-214ENST00000495485 CATSPEREQ5SY80 951 aa9.84□□□□□ -0.83
HDAC3-214ENST00000495485 CPTPQ5TA50 214 aa9.84□□□□□ -0.83
HDAC3-214ENST00000495485 PRAMEF9Q5VWM5 478 aa9.84□□□□□ -0.83
HDAC3-214ENST00000495485 NANOGP8Q6NSW7 305 aa9.84□□□□□ -0.83
HDAC3-214ENST00000495485 DBX2Q6ZNG2 339 aa9.84□□□□□ -0.83
HDAC3-214ENST00000495485 IKBIPQ70UQ0 350 aa9.84□□□□□ -0.83
HDAC3-214ENST00000495485 FAM129CQ86XR2 697 aa9.84□□□□□ -0.83
HDAC3-214ENST00000495485 SLC15A3Q8IY34 581 aa9.84□□□□□ -0.83
HDAC3-214ENST00000495485 METTL4Q8N3J2 472 aa9.84□□□□□ -0.83
HDAC3-214ENST00000495485 HIPK4Q8NE63 616 aa9.84□□□□□ -0.83
HDAC3-214ENST00000495485 TRPV3Q8NET8 790 aa9.84□□□□□ -0.83
HDAC3-214ENST00000495485 OR4K1Q8NGD4 311 aa9.84□□□□□ -0.83
HDAC3-214ENST00000495485 OR8J2Q8NGG1 315 aa9.84□□□□□ -0.83
HDAC3-214ENST00000495485 OR52E1Q8NGJ3 308 aa9.84□□□□□ -0.83
HDAC3-214ENST00000495485 LCN9Q8WX39 176 aa9.84□□□□□ -0.83
HDAC3-214ENST00000495485 TMEM125Q96AQ2 219 aa9.84□□□□□ -0.83
HDAC3-214ENST00000495485 TEX37Q96LM6 180 aa9.84□□□□□ -0.83
HDAC3-214ENST00000495485 TSSK3Q96PN8 268 aa9.84□□□□□ -0.83
HDAC3-214ENST00000495485 THUMPD3Q9BV44 507 aaKnown RBP9.84□□□□□ -0.83
HDAC3-214ENST00000495485 DUSP23Q9BVJ7 150 aa9.84□□□□□ -0.83
HDAC3-214ENST00000495485 SRMSQ9H3Y6 488 aa9.84□□□□□ -0.83
HDAC3-214ENST00000495485 GAREM1Q9H706 876 aa9.84□□□□□ -0.83
HDAC3-214ENST00000495485 NANOGQ9H9S0 305 aa9.84□□□□□ -0.83
HDAC3-214ENST00000495485 PARD6AQ9NPB6 346 aa9.84□□□□□ -0.83
HDAC3-214ENST00000495485 DMRT3Q9NQL9 472 aa9.84□□□□□ -0.83
HDAC3-214ENST00000495485 PRDM8Q9NQV8 689 aa9.84□□□□□ -0.83
HDAC3-214ENST00000495485 ACTR3BQ9P1U1 418 aa9.84□□□□□ -0.83
HDAC3-214ENST00000495485 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.84□□□□□ -0.83
HDAC3-214ENST00000495485 MAGEL2Q9UJ55 1249 aa9.84□□□□□ -0.83
HDAC3-214ENST00000495485 MCM8Q9UJA3 840 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms