RNA–Protein interactions for RNA: ENST00000494776.1

LIME1-209, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 391 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-209ENST00000494776 CHIT1Q13231 466 aa15.12■□□□□ 0.01
LIME1-209ENST00000494776 LAPTM5Q13571 262 aa15.12■□□□□ 0.01
LIME1-209ENST00000494776 RBBP7Q16576 425 aa15.12■□□□□ 0.01
LIME1-209ENST00000494776 SYT16Q17RD7 645 aa15.12■□□□□ 0.01
LIME1-209ENST00000494776 TECRLQ5HYJ1 363 aa15.12■□□□□ 0.01
LIME1-209ENST00000494776 PAGE2BQ5JRK9 111 aa15.12■□□□□ 0.01
LIME1-209ENST00000494776 CPZQ66K79 652 aa15.12■□□□□ 0.01
LIME1-209ENST00000494776 CNPY4Q8N129 248 aa15.12■□□□□ 0.01
LIME1-209ENST00000494776 AMER3Q8N944 861 aa15.12■□□□□ 0.01
LIME1-209ENST00000494776 ANKRD53Q8N9V6 530 aa15.12■□□□□ 0.01
LIME1-209ENST00000494776 NT5CQ8TCD5 201 aa15.12■□□□□ 0.01
LIME1-209ENST00000494776 UBTD2Q8WUN7 234 aa15.12■□□□□ 0.01
LIME1-209ENST00000494776 PTCD3Q96EY7 689 aaKnown RBP15.12■□□□□ 0.01
LIME1-209ENST00000494776 ABHD17AQ96GS6 310 aa15.12■□□□□ 0.01
LIME1-209ENST00000494776 VPS50Q96JG6 964 aa15.12■□□□□ 0.01
LIME1-209ENST00000494776 FER1L6-AS2Q96M78 137 aa15.12■□□□□ 0.01
LIME1-209ENST00000494776 GPR78Q96P69 363 aa15.12■□□□□ 0.01
LIME1-209ENST00000494776 PITHD1Q9GZP4 211 aaPredicted RBP15.12■□□□□ 0.01
LIME1-209ENST00000494776 SLC25A18Q9H1K4 315 aa15.12■□□□□ 0.01
LIME1-209ENST00000494776 EPB41L4BQ9H329 900 aa15.12■□□□□ 0.01
LIME1-209ENST00000494776 EHD1Q9H4M9 534 aa15.12■□□□□ 0.01
LIME1-209ENST00000494776 C14orf105Q9NVL8 296 aa15.12■□□□□ 0.01
LIME1-209ENST00000494776 P4HTMQ9NXG6 502 aa15.12■□□□□ 0.01
LIME1-209ENST00000494776 FETUBQ9UGM5 382 aa15.12■□□□□ 0.01
LIME1-209ENST00000494776 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.12■□□□□ 0.01
LIME1-209ENST00000494776 TBK1Q9UHD2 729 aa15.12■□□□□ 0.01
LIME1-209ENST00000494776 C3orf18Q9UK00 162 aa15.12■□□□□ 0.01
LIME1-209ENST00000494776 G3BP2Q9UN86 482 aaKnown RBP15.12■□□□□ 0.01
LIME1-209ENST00000494776 SLC22A7Q9Y694 548 aa15.12■□□□□ 0.01
LIME1-209ENST00000494776 V9GYY5 206 aaPredicted RBP15.12■□□□□ 0.01
LIME1-209ENST00000494776 SEC16AO15027 2179 aa15.11■□□□□ 0.01
LIME1-209ENST00000494776 SMIM24O75264 130 aa15.11■□□□□ 0.01
LIME1-209ENST00000494776 KLHL18O94889 574 aa15.11■□□□□ 0.01
LIME1-209ENST00000494776 HEXBP07686 556 aa15.11■□□□□ 0.01
LIME1-209ENST00000494776 MTHFD2P13995 350 aa15.11■□□□□ 0.01
LIME1-209ENST00000494776 EPB42P16452 691 aa15.11■□□□□ 0.01
LIME1-209ENST00000494776 EMP2P54851 167 aa15.11■□□□□ 0.01
LIME1-209ENST00000494776 VSNL1P62760 191 aa15.11■□□□□ 0.01
LIME1-209ENST00000494776 NFATC3Q12968 1075 aa15.11■□□□□ 0.01
LIME1-209ENST00000494776 DOC2AQ14183 400 aa15.11■□□□□ 0.01
LIME1-209ENST00000494776 SETDB1Q15047 1291 aa15.11■□□□□ 0.01
LIME1-209ENST00000494776 MFSD4BQ5TF39 518 aa15.11■□□□□ 0.01
LIME1-209ENST00000494776 NIPAL1Q6NVV3 410 aa15.11■□□□□ 0.01
LIME1-209ENST00000494776 TIFABQ6ZNK6 161 aa15.11■□□□□ 0.01
LIME1-209ENST00000494776 PRSS41Q7RTY9 318 aa15.11■□□□□ 0.01
LIME1-209ENST00000494776 PPP1R32Q7Z5V6 425 aa15.11■□□□□ 0.01
LIME1-209ENST00000494776 TMEM151BQ8IW70 566 aa15.11■□□□□ 0.01
LIME1-209ENST00000494776 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.11■□□□□ 0.01
LIME1-209ENST00000494776 TEX9Q8N6V9 391 aa15.11■□□□□ 0.01
LIME1-209ENST00000494776 CLEC1AQ8NC01 280 aa15.11■□□□□ 0.01
LIME1-209ENST00000494776 NACC2Q96BF6 587 aa15.11■□□□□ 0.01
LIME1-209ENST00000494776 EFCAB11Q9BUY7 163 aa15.11■□□□□ 0.01
LIME1-209ENST00000494776 TRIM55Q9BYV6 548 aa15.11■□□□□ 0.01
LIME1-209ENST00000494776 ZNF71Q9NQZ8 489 aaPredicted RBP15.11■□□□□ 0.01
LIME1-209ENST00000494776 HCN3Q9P1Z3 774 aa15.11■□□□□ 0.01
LIME1-209ENST00000494776 XPR1Q9UBH6 696 aa15.11■□□□□ 0.01
LIME1-209ENST00000494776 TMCO1Q9UM00 188 aa15.11■□□□□ 0.01
LIME1-209ENST00000494776 NAALAD2Q9Y3Q0 740 aa15.11■□□□□ 0.01
LIME1-209ENST00000494776 ASB1Q9Y576 335 aa15.11■□□□□ 0.01
LIME1-209ENST00000494776 TNPO3Q9Y5L0 923 aaKnown RBP15.11■□□□□ 0.01
LIME1-209ENST00000494776 FER1L5A0AVI2 2057 aa15.11■□□□□ 0.01
LIME1-209ENST00000494776 IGLV3-12A0A075B6K2 115 aa15.1■□□□□ 0.01
LIME1-209ENST00000494776 A6NL46 340 aa15.1■□□□□ 0.01
LIME1-209ENST00000494776 SMIM23A6NLE4 172 aa15.1■□□□□ 0.01
LIME1-209ENST00000494776 AGPSO00116 658 aa15.1■□□□□ 0.01
LIME1-209ENST00000494776 RDH16O75452 317 aa15.1■□□□□ 0.01
LIME1-209ENST00000494776 SERPINA6P08185 405 aa15.1■□□□□ 0.01
LIME1-209ENST00000494776 ZNF888P0CJ79 500 aaPredicted RBP15.1■□□□□ 0.01
LIME1-209ENST00000494776 ALOX12P18054 663 aa15.1■□□□□ 0.01
LIME1-209ENST00000494776 GSTM2P28161 218 aa15.1■□□□□ 0.01
LIME1-209ENST00000494776 STXBP1P61764 594 aaKnown RBP15.1■□□□□ 0.01
LIME1-209ENST00000494776 SNRPNP63162 240 aaKnown RBP15.1■□□□□ 0.01
LIME1-209ENST00000494776 DEFB134Q4QY38 66 aa15.1■□□□□ 0.01
LIME1-209ENST00000494776 TOR1AIP1Q5JTV8 583 aa15.1■□□□□ 0.01
LIME1-209ENST00000494776 LAPTM4BQ86VI4 370 aa15.1■□□□□ 0.01
LIME1-209ENST00000494776 MYLK4Q86YV6 388 aaPredicted RBP15.1■□□□□ 0.01
LIME1-209ENST00000494776 PTGR2Q8N8N7 351 aaPredicted RBP15.1■□□□□ 0.01
LIME1-209ENST00000494776 OR51Q1Q8NH59 317 aa15.1■□□□□ 0.01
LIME1-209ENST00000494776 PHF21BQ96EK2 531 aa15.1■□□□□ 0.01
LIME1-209ENST00000494776 MRPL57Q9BQC6 102 aaKnown RBP15.1■□□□□ 0.01
LIME1-209ENST00000494776 SLC25A23Q9BV35 468 aa15.1■□□□□ 0.01
LIME1-209ENST00000494776 NT5DC2Q9H857 520 aa15.1■□□□□ 0.01
LIME1-209ENST00000494776 ZNF860A6NHJ4 632 aa15.09■□□□□ 0.01
LIME1-209ENST00000494776 GOLGA8RI6L899 631 aa15.09■□□□□ 0.01
LIME1-209ENST00000494776 KLK8O60259 260 aa15.09■□□□□ 0.01
LIME1-209ENST00000494776 SHBGP04278 402 aa15.09■□□□□ 0.01
LIME1-209ENST00000494776 HPDP32754 393 aaPredicted RBP15.09■□□□□ 0.01
LIME1-209ENST00000494776 ARL1P40616 181 aaPredicted RBP15.09■□□□□ 0.01
LIME1-209ENST00000494776 XCR1P46094 333 aa15.09■□□□□ 0.01
LIME1-209ENST00000494776 SLCO1A2P46721 670 aa15.09■□□□□ 0.01
LIME1-209ENST00000494776 PIK3CGP48736 1102 aa15.09■□□□□ 0.01
LIME1-209ENST00000494776 RAB8AP61006 207 aa15.09■□□□□ 0.01
LIME1-209ENST00000494776 NAA30Q147X3 362 aaPredicted RBP15.09■□□□□ 0.01
LIME1-209ENST00000494776 TBCCQ15814 346 aa15.09■□□□□ 0.01
LIME1-209ENST00000494776 MINDY4Q4G0A6 757 aa15.09■□□□□ 0.01
LIME1-209ENST00000494776 LACTB2Q53H82 288 aaPredicted RBP15.09■□□□□ 0.01
LIME1-209ENST00000494776 DCAF10Q5QP82 559 aa15.09■□□□□ 0.01
LIME1-209ENST00000494776 FAAH2Q6GMR7 532 aa15.09■□□□□ 0.01
LIME1-209ENST00000494776 PDSS2Q86YH6 399 aa15.09■□□□□ 0.01
LIME1-209ENST00000494776 ZNF843Q8N446 348 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms