RNA–Protein interactions for RNA: ENST00000494610.1

CSNK1E-212, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-212ENST00000494610 KDM1AO60341 852 aa11.21□□□□□ -0.61
CSNK1E-212ENST00000494610 KLHL18O94889 574 aa11.21□□□□□ -0.61
CSNK1E-212ENST00000494610 SLCO2B1O94956 709 aa11.21□□□□□ -0.61
CSNK1E-212ENST00000494610 SNUPNO95149 360 aaKnown RBP11.21□□□□□ -0.61
CSNK1E-212ENST00000494610 F10P00742 488 aa11.21□□□□□ -0.61
CSNK1E-212ENST00000494610 PROCP04070 461 aa11.21□□□□□ -0.61
CSNK1E-212ENST00000494610 MYL2P10916 166 aa11.21□□□□□ -0.61
CSNK1E-212ENST00000494610 NEFHP12036 1026 aa11.21□□□□□ -0.61
CSNK1E-212ENST00000494610 CD1DP15813 335 aa11.21□□□□□ -0.61
CSNK1E-212ENST00000494610 TFEBP19484 476 aa11.21□□□□□ -0.61
CSNK1E-212ENST00000494610 ALAS2P22557 587 aa11.21□□□□□ -0.61
CSNK1E-212ENST00000494610 CCR7P32248 378 aa11.21□□□□□ -0.61
CSNK1E-212ENST00000494610 IRF9Q00978 393 aa11.21□□□□□ -0.61
CSNK1E-212ENST00000494610 TECRLQ5HYJ1 363 aa11.21□□□□□ -0.61
CSNK1E-212ENST00000494610 KIRREL3Q8IZU9 778 aa11.21□□□□□ -0.61
CSNK1E-212ENST00000494610 GIMAP7Q8NHV1 300 aa11.21□□□□□ -0.61
CSNK1E-212ENST00000494610 LKAAEAR1Q8TD35 194 aa11.21□□□□□ -0.61
CSNK1E-212ENST00000494610 MAGEC3Q8TD91 643 aa11.21□□□□□ -0.61
CSNK1E-212ENST00000494610 FAR1Q8WVX9 515 aa11.21□□□□□ -0.61
CSNK1E-212ENST00000494610 KIAA1191Q96A73 305 aa11.21□□□□□ -0.61
CSNK1E-212ENST00000494610 FAM136AQ96C01 138 aa11.21□□□□□ -0.61
CSNK1E-212ENST00000494610 NXNL1Q96CM4 212 aa11.21□□□□□ -0.61
CSNK1E-212ENST00000494610 DPH2Q9BQC3 489 aaPredicted RBP11.21□□□□□ -0.61
CSNK1E-212ENST00000494610 SOX17Q9H6I2 414 aaPredicted RBP11.21□□□□□ -0.61
CSNK1E-212ENST00000494610 IGSF5Q9NSI5 407 aa11.21□□□□□ -0.61
CSNK1E-212ENST00000494610 IRAK4Q9NWZ3 460 aa11.21□□□□□ -0.61
CSNK1E-212ENST00000494610 NUDT4Q9NZJ9 180 aa11.21□□□□□ -0.61
CSNK1E-212ENST00000494610 XPR1Q9UBH6 696 aa11.21□□□□□ -0.61
CSNK1E-212ENST00000494610 RNF112Q9ULX5 631 aa11.21□□□□□ -0.61
CSNK1E-212ENST00000494610 TDRKHQ9Y2W6 561 aaKnown RBP11.21□□□□□ -0.61
CSNK1E-212ENST00000494610 IQCF5A8MTL0 148 aa11.2□□□□□ -0.62
CSNK1E-212ENST00000494610 FOXO6A8MYZ6 492 aa11.2□□□□□ -0.62
CSNK1E-212ENST00000494610 IFRD1O00458 451 aaPredicted RBP11.2□□□□□ -0.62
CSNK1E-212ENST00000494610 POLR3GO15318 223 aaPredicted RBP11.2□□□□□ -0.62
CSNK1E-212ENST00000494610 GPC4O75487 556 aa11.2□□□□□ -0.62
CSNK1E-212ENST00000494610 CATP04040 527 aaKnown RBP11.2□□□□□ -0.62
CSNK1E-212ENST00000494610 CHRM5P08912 532 aaPredicted RBP11.2□□□□□ -0.62
CSNK1E-212ENST00000494610 DHRS4L1P0CG22 281 aa11.2□□□□□ -0.62
CSNK1E-212ENST00000494610 CREB1P16220 341 aa11.2□□□□□ -0.62
CSNK1E-212ENST00000494610 MDH1P40925 334 aaKnown RBP11.2□□□□□ -0.62
CSNK1E-212ENST00000494610 GRIA3P42263 894 aa11.2□□□□□ -0.62
CSNK1E-212ENST00000494610 ETV4P43268 484 aa11.2□□□□□ -0.62
CSNK1E-212ENST00000494610 SERPINB4P48594 390 aa11.2□□□□□ -0.62
CSNK1E-212ENST00000494610 SOX8P57073 446 aa11.2□□□□□ -0.62
CSNK1E-212ENST00000494610 TIAL1Q01085 375 aaKnown RBP eCLIP11.2□□□□□ -0.62
CSNK1E-212ENST00000494610 HSPA14Q0VDF9 509 aa11.2□□□□□ -0.62
CSNK1E-212ENST00000494610 ZNF169Q14929 603 aaPredicted RBP11.2□□□□□ -0.62
CSNK1E-212ENST00000494610 CDKL4Q5MAI5 379 aa11.2□□□□□ -0.62
CSNK1E-212ENST00000494610 PRAMEF13Q5VWM6 474 aa11.2□□□□□ -0.62
CSNK1E-212ENST00000494610 ATG16L1Q676U5 607 aa11.2□□□□□ -0.62
CSNK1E-212ENST00000494610 KIRREL2Q6UWL6 708 aa11.2□□□□□ -0.62
CSNK1E-212ENST00000494610 TTLL10Q6ZVT0 673 aa11.2□□□□□ -0.62
CSNK1E-212ENST00000494610 COX15Q7KZN9 410 aa11.2□□□□□ -0.62
CSNK1E-212ENST00000494610 HOMEZQ8IX15 550 aa11.2□□□□□ -0.62
CSNK1E-212ENST00000494610 SLC22A15Q8IZD6 547 aa11.2□□□□□ -0.62
CSNK1E-212ENST00000494610 SLC34A3Q8N130 599 aa11.2□□□□□ -0.62
CSNK1E-212ENST00000494610 DNAJC22Q8N4W6 341 aa11.2□□□□□ -0.62
CSNK1E-212ENST00000494610 ARMC2Q8NEN0 867 aa11.2□□□□□ -0.62
CSNK1E-212ENST00000494610 PPP1R14CQ8TAE6 165 aa11.2□□□□□ -0.62
CSNK1E-212ENST00000494610 MGARPQ8TDB4 240 aa11.2□□□□□ -0.62
CSNK1E-212ENST00000494610 DENND1AQ8TEH3 1009 aa11.2□□□□□ -0.62
CSNK1E-212ENST00000494610 SKA2Q8WVK7 121 aaPredicted RBP11.2□□□□□ -0.62
CSNK1E-212ENST00000494610 TFGQ92734 400 aaPredicted RBP11.2□□□□□ -0.62
CSNK1E-212ENST00000494610 TAAR6Q96RI8 345 aa11.2□□□□□ -0.62
CSNK1E-212ENST00000494610 PAIP2Q9BPZ3 127 aaKnown RBP11.2□□□□□ -0.62
CSNK1E-212ENST00000494610 CAPS2Q9BXY5 557 aa11.2□□□□□ -0.62
CSNK1E-212ENST00000494610 TXLNGQ9NUQ3 528 aa11.2□□□□□ -0.62
CSNK1E-212ENST00000494610 PLA2G3Q9NZ20 509 aa11.2□□□□□ -0.62
CSNK1E-212ENST00000494610 STOX2Q9P2F5 926 aaPredicted RBP11.2□□□□□ -0.62
CSNK1E-212ENST00000494610 COPG2Q9UBF2 871 aa11.2□□□□□ -0.62
CSNK1E-212ENST00000494610 HEBP2Q9Y5Z4 205 aa11.2□□□□□ -0.62
CSNK1E-212ENST00000494610 HS3ST3B1Q9Y662 390 aa11.2□□□□□ -0.62
CSNK1E-212ENST00000494610 NIPBLQ6KC79 2804 aaeCLIP11.19□□□□□ -0.62
CSNK1E-212ENST00000494610 SLC5A10A0PJK1 596 aa11.19□□□□□ -0.62
CSNK1E-212ENST00000494610 MATN2O00339 956 aa11.19□□□□□ -0.62
CSNK1E-212ENST00000494610 MED26O95402 600 aa11.19□□□□□ -0.62
CSNK1E-212ENST00000494610 TSPAN12O95859 305 aa11.19□□□□□ -0.62
CSNK1E-212ENST00000494610 HBQ1P09105 142 aa11.19□□□□□ -0.62
CSNK1E-212ENST00000494610 HIST1H2AGP0C0S8 130 aaPredicted RBP11.19□□□□□ -0.62
CSNK1E-212ENST00000494610 EDN3P14138 238 aa11.19□□□□□ -0.62
CSNK1E-212ENST00000494610 CPA3P15088 417 aa11.19□□□□□ -0.62
CSNK1E-212ENST00000494610 HIST1H2ADP20671 130 aa11.19□□□□□ -0.62
CSNK1E-212ENST00000494610 ATP5F1P24539 256 aaPredicted RBP11.19□□□□□ -0.62
CSNK1E-212ENST00000494610 GRK2P25098 689 aa11.19□□□□□ -0.62
CSNK1E-212ENST00000494610 SERPINB5P36952 375 aa11.19□□□□□ -0.62
CSNK1E-212ENST00000494610 OR1D4P47884 311 aa11.19□□□□□ -0.62
CSNK1E-212ENST00000494610 AP1S2P56377 157 aa11.19□□□□□ -0.62
CSNK1E-212ENST00000494610 CDKL1Q00532 357 aa11.19□□□□□ -0.62
CSNK1E-212ENST00000494610 AIMP2Q13155 320 aaKnown RBP11.19□□□□□ -0.62
CSNK1E-212ENST00000494610 PDK4Q16654 411 aa11.19□□□□□ -0.62
CSNK1E-212ENST00000494610 TTC23LQ6PF05 361 aa11.19□□□□□ -0.62
CSNK1E-212ENST00000494610 IGFL2Q6UWQ7 119 aa11.19□□□□□ -0.62
CSNK1E-212ENST00000494610 UNC5DQ6UXZ4 953 aa11.19□□□□□ -0.62
CSNK1E-212ENST00000494610 ZYG11AQ6WRX3 759 aa11.19□□□□□ -0.62
CSNK1E-212ENST00000494610 GPSM1Q86YR5 675 aa11.19□□□□□ -0.62
CSNK1E-212ENST00000494610 PRSS58Q8IYP2 241 aa11.19□□□□□ -0.62
CSNK1E-212ENST00000494610 TCAIMQ8N3R3 496 aa11.19□□□□□ -0.62
CSNK1E-212ENST00000494610 LRRC8CQ8TDW0 803 aa11.19□□□□□ -0.62
CSNK1E-212ENST00000494610 PPP4R1Q8TF05 950 aa11.19□□□□□ -0.62
CSNK1E-212ENST00000494610 EEF1AKMT1Q8WVE0 214 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms