RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 OR5T3Q8NGG3 340 aa16.99■□□□□ 0.31
HMGN1-219ENST00000491183 GRHL3Q8TE85 626 aa16.99■□□□□ 0.31
HMGN1-219ENST00000491183 HAS2Q92819 552 aa16.99■□□□□ 0.31
HMGN1-219ENST00000491183 VPS39Q96JC1 886 aa16.99■□□□□ 0.31
HMGN1-219ENST00000491183 TSNARE1Q96NA8 513 aa16.99■□□□□ 0.31
HMGN1-219ENST00000491183 TUBB6Q9BUF5 446 aa16.99■□□□□ 0.31
HMGN1-219ENST00000491183 SAYSD1Q9NPB0 183 aa16.99■□□□□ 0.31
HMGN1-219ENST00000491183 AGPAT4Q9NRZ5 378 aa16.99■□□□□ 0.31
HMGN1-219ENST00000491183 NSMCE4AQ9NXX6 385 aa16.99■□□□□ 0.31
HMGN1-219ENST00000491183 MTO1Q9Y2Z2 717 aaKnown RBP16.99■□□□□ 0.31
HMGN1-219ENST00000491183 OARD1Q9Y530 152 aa16.99■□□□□ 0.31
HMGN1-219ENST00000491183 NDC80O14777 642 aa16.98■□□□□ 0.31
HMGN1-219ENST00000491183 NDUFS4O43181 175 aa16.98■□□□□ 0.31
HMGN1-219ENST00000491183 GALR3O60755 368 aaPredicted RBP16.98■□□□□ 0.31
HMGN1-219ENST00000491183 C1QAP02745 245 aa16.98■□□□□ 0.31
HMGN1-219ENST00000491183 SERPIND1P05546 499 aa16.98■□□□□ 0.31
HMGN1-219ENST00000491183 ICAM2P13598 275 aa16.98■□□□□ 0.31
HMGN1-219ENST00000491183 TNFSF10P50591 281 aa16.98■□□□□ 0.31
HMGN1-219ENST00000491183 ARG2P78540 354 aa16.98■□□□□ 0.31
HMGN1-219ENST00000491183 CDKL1Q00532 357 aa16.98■□□□□ 0.31
HMGN1-219ENST00000491183 TSNQ15631 228 aaKnown RBP16.98■□□□□ 0.31
HMGN1-219ENST00000491183 C18orf21Q32NC0 220 aaPredicted RBP16.98■□□□□ 0.31
HMGN1-219ENST00000491183 RPUSD3Q6P087 351 aaKnown RBP16.98■□□□□ 0.31
HMGN1-219ENST00000491183 NXPE4Q6UWF7 544 aa16.98■□□□□ 0.31
HMGN1-219ENST00000491183 MAATS1Q7Z4T9 603 aa16.98■□□□□ 0.31
HMGN1-219ENST00000491183 ANKRD37Q7Z713 158 aa16.98■□□□□ 0.31
HMGN1-219ENST00000491183 ANKRD53Q8N9V6 530 aa16.98■□□□□ 0.31
HMGN1-219ENST00000491183 OR1N1Q8NGS0 311 aa16.98■□□□□ 0.31
HMGN1-219ENST00000491183 NT5CQ8TCD5 201 aa16.98■□□□□ 0.31
HMGN1-219ENST00000491183 PEX11GQ96HA9 241 aa16.98■□□□□ 0.31
HMGN1-219ENST00000491183 CAB39LQ9H9S4 337 aa16.98■□□□□ 0.31
HMGN1-219ENST00000491183 PELI2Q9HAT8 420 aa16.98■□□□□ 0.31
HMGN1-219ENST00000491183 POPDC3Q9HBV1 291 aa16.98■□□□□ 0.31
HMGN1-219ENST00000491183 LANCL2Q9NS86 450 aa16.98■□□□□ 0.31
HMGN1-219ENST00000491183 CTNNAL1Q9UBT7 734 aa16.98■□□□□ 0.31
HMGN1-219ENST00000491183 ZFP69BQ9UJL9 534 aa16.98■□□□□ 0.31
HMGN1-219ENST00000491183 ERRFI1Q9UJM3 462 aaPredicted RBP16.98■□□□□ 0.31
HMGN1-219ENST00000491183 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.98■□□□□ 0.316e-9■■■■■ 32.8
HMGN1-219ENST00000491183 E2F3O00716 465 aa16.97■□□□□ 0.31
HMGN1-219ENST00000491183 EIF3HO15372 352 aaKnown RBP eCLIP16.97■□□□□ 0.31
HMGN1-219ENST00000491183 F10P00742 488 aa16.97■□□□□ 0.31
HMGN1-219ENST00000491183 ALOX12P18054 663 aa16.97■□□□□ 0.31
HMGN1-219ENST00000491183 AHRP35869 848 aa16.97■□□□□ 0.31
HMGN1-219ENST00000491183 REEP5Q00765 189 aa16.97■□□□□ 0.31
HMGN1-219ENST00000491183 RHAGQ02094 409 aa16.97■□□□□ 0.31
HMGN1-219ENST00000491183 HYAL2Q12891 473 aa16.97■□□□□ 0.31
HMGN1-219ENST00000491183 CALCOCO2Q13137 446 aa16.97■□□□□ 0.31
HMGN1-219ENST00000491183 HERC3Q15034 1050 aa16.97■□□□□ 0.31
HMGN1-219ENST00000491183 DEFB134Q4QY38 66 aa16.97■□□□□ 0.31
HMGN1-219ENST00000491183 HIST2H2BCQ6DN03 193 aa16.97■□□□□ 0.31
HMGN1-219ENST00000491183 ST6GALNAC3Q8NDV1 305 aa16.97■□□□□ 0.31
HMGN1-219ENST00000491183 PLPP5Q8NEB5 264 aa16.97■□□□□ 0.31
HMGN1-219ENST00000491183 FAR1Q8WVX9 515 aa16.97■□□□□ 0.31
HMGN1-219ENST00000491183 EGFL8Q99944 293 aa16.97■□□□□ 0.31
HMGN1-219ENST00000491183 RBCK1Q9BYM8 510 aa16.97■□□□□ 0.31
HMGN1-219ENST00000491183 UNKQ9C0B0 810 aaKnown RBP16.97■□□□□ 0.31
HMGN1-219ENST00000491183 GPAMQ9HCL2 828 aa16.97■□□□□ 0.31
HMGN1-219ENST00000491183 DYRK1BQ9Y463 629 aa16.97■□□□□ 0.31
HMGN1-219ENST00000491183 TCRBV9S1A1TA0A576 114 aa16.96■□□□□ 0.31
HMGN1-219ENST00000491183 DYTNA2CJ06 578 aa16.96■□□□□ 0.31
HMGN1-219ENST00000491183 WIPF3A6NGB9 483 aa16.96■□□□□ 0.31
HMGN1-219ENST00000491183 CHST10O43529 356 aa16.96■□□□□ 0.31
HMGN1-219ENST00000491183 CDC123O75794 336 aaPredicted RBP16.96■□□□□ 0.31
HMGN1-219ENST00000491183 WDPCPO95876 746 aa16.96■□□□□ 0.31
HMGN1-219ENST00000491183 ZNF888P0CJ79 500 aaPredicted RBP16.96■□□□□ 0.31
HMGN1-219ENST00000491183 SMIM10L1P0DMW3 83 aa16.96■□□□□ 0.31
HMGN1-219ENST00000491183 CASQ1P31415 396 aa16.96■□□□□ 0.31
HMGN1-219ENST00000491183 GDF5P43026 501 aa16.96■□□□□ 0.31
HMGN1-219ENST00000491183 AGTR2P50052 363 aa16.96■□□□□ 0.31
HMGN1-219ENST00000491183 GPX6P59796 221 aa16.96■□□□□ 0.31
HMGN1-219ENST00000491183 ETF1P62495 437 aaKnown RBP16.96■□□□□ 0.31
HMGN1-219ENST00000491183 OLR1P78380 273 aa16.96■□□□□ 0.31
HMGN1-219ENST00000491183 POU4F1Q01851 419 aa16.96■□□□□ 0.31
HMGN1-219ENST00000491183 TRADDQ15628 312 aa16.96■□□□□ 0.31
HMGN1-219ENST00000491183 PLAG1Q6DJT9 500 aa16.96■□□□□ 0.31
HMGN1-219ENST00000491183 C3orf62Q6ZUJ4 267 aa16.96■□□□□ 0.31
HMGN1-219ENST00000491183 CYS1Q717R9 158 aa16.96■□□□□ 0.31
HMGN1-219ENST00000491183 TMPRSS11BQ86T26 416 aa16.96■□□□□ 0.31
HMGN1-219ENST00000491183 KLHDC8AQ8IYD2 350 aa16.96■□□□□ 0.31
HMGN1-219ENST00000491183 SPATA6LQ8N4H0 392 aa16.96■□□□□ 0.31
HMGN1-219ENST00000491183 TBC1D19Q8N5T2 526 aa16.96■□□□□ 0.31
HMGN1-219ENST00000491183 UTP15Q8TED0 518 aaKnown RBP16.96■□□□□ 0.31
HMGN1-219ENST00000491183 CREB3L4Q8TEY5 395 aa16.96■□□□□ 0.31
HMGN1-219ENST00000491183 RHBDF1Q96CC6 855 aa16.96■□□□□ 0.31
HMGN1-219ENST00000491183 SMIM10Q96HG1 83 aa16.96■□□□□ 0.31
HMGN1-219ENST00000491183 OR1F2PQ96R84 312 aa16.96■□□□□ 0.31
HMGN1-219ENST00000491183 AIF1LQ9BQI0 150 aa16.96■□□□□ 0.31
HMGN1-219ENST00000491183 SLC6A16Q9GZN6 736 aa16.96■□□□□ 0.31
HMGN1-219ENST00000491183 DERL2Q9GZP9 239 aa16.96■□□□□ 0.31
HMGN1-219ENST00000491183 KLHL31Q9H511 634 aa16.96■□□□□ 0.31
HMGN1-219ENST00000491183 PLEKHB1Q9UF11 243 aaPredicted RBP16.96■□□□□ 0.31
HMGN1-219ENST00000491183 C19orf25Q9UFG5 118 aaPredicted RBP16.96■□□□□ 0.31
HMGN1-219ENST00000491183 KCNE2Q9Y6J6 123 aa16.96■□□□□ 0.31
HMGN1-219ENST00000491183 UTP20O75691 2785 aaKnown RBP16.96■□□□□ 0.31
HMGN1-219ENST00000491183 FAM159BA6NKW6 160 aa16.95■□□□□ 0.3
HMGN1-219ENST00000491183 TAPBPO15533 448 aa16.95■□□□□ 0.3
HMGN1-219ENST00000491183 PHGDHO43175 533 aaKnown RBP16.95■□□□□ 0.3
HMGN1-219ENST00000491183 DDAH2O95865 285 aa16.95■□□□□ 0.3
HMGN1-219ENST00000491183 IL10P22301 178 aa16.95■□□□□ 0.3
HMGN1-219ENST00000491183 HNF4AP41235 474 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms