RNA–Protein interactions for RNA: ENST00000488155.1

NIPAL3-207, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best)

Gene NIPAL3, Length 931 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-207ENST00000488155 ZNF33BQ06732 778 aa10.67□□□□□ -0.7
NIPAL3-207ENST00000488155 CSHL1Q14406 222 aa10.67□□□□□ -0.7
NIPAL3-207ENST00000488155 BTBD16Q32M84 506 aa10.67□□□□□ -0.7
NIPAL3-207ENST00000488155 C18orf21Q32NC0 220 aaPredicted RBP10.67□□□□□ -0.7
NIPAL3-207ENST00000488155 FAM180AQ6UWF9 173 aa10.67□□□□□ -0.7
NIPAL3-207ENST00000488155 SBSNQ6UWP8 590 aa10.67□□□□□ -0.7
NIPAL3-207ENST00000488155 GALNT7Q86SF2 657 aa10.67□□□□□ -0.7
NIPAL3-207ENST00000488155 CTAGE6Q86UF2 777 aa10.67□□□□□ -0.7
NIPAL3-207ENST00000488155 ZC3HC1Q86WB0 502 aaKnown RBP10.67□□□□□ -0.7
NIPAL3-207ENST00000488155 ZBED8Q8IZ13 594 aa10.67□□□□□ -0.7
NIPAL3-207ENST00000488155 ST6GALNAC3Q8NDV1 305 aa10.67□□□□□ -0.7
NIPAL3-207ENST00000488155 SLC5A11Q8WWX8 675 aa10.67□□□□□ -0.7
NIPAL3-207ENST00000488155 NEIL2Q969S2 332 aa10.67□□□□□ -0.7
NIPAL3-207ENST00000488155 FBXL8Q96CD0 374 aa10.67□□□□□ -0.7
NIPAL3-207ENST00000488155 LRRC39Q96DD0 335 aa10.67□□□□□ -0.7
NIPAL3-207ENST00000488155 IMMP1LQ96LU5 166 aa10.67□□□□□ -0.7
NIPAL3-207ENST00000488155 RUNDC3BQ96NL0 473 aa10.67□□□□□ -0.7
NIPAL3-207ENST00000488155 BARD1Q99728 777 aaKnown RBP10.67□□□□□ -0.7
NIPAL3-207ENST00000488155 EGFL8Q99944 293 aa10.67□□□□□ -0.7
NIPAL3-207ENST00000488155 TUBB6Q9BUF5 446 aa10.67□□□□□ -0.7
NIPAL3-207ENST00000488155 ZNF700Q9H0M5 742 aa10.67□□□□□ -0.7
NIPAL3-207ENST00000488155 STMN3Q9NZ72 180 aa10.67□□□□□ -0.7
NIPAL3-207ENST00000488155 CORO1CQ9ULV4 474 aaPredicted RBP10.67□□□□□ -0.7
NIPAL3-207ENST00000488155 OSGIN2Q9Y236 505 aa10.67□□□□□ -0.7
NIPAL3-207ENST00000488155 SLC5A6Q9Y289 635 aa10.67□□□□□ -0.7
NIPAL3-207ENST00000488155 DYRK1BQ9Y463 629 aa10.67□□□□□ -0.7
NIPAL3-207ENST00000488155 CREBBPQ92793 2442 aa10.66□□□□□ -0.7
NIPAL3-207ENST00000488155 TRAV17A0A0B4J275 112 aa10.66□□□□□ -0.7
NIPAL3-207ENST00000488155 TRBC2A0A5B9 178 aa10.66□□□□□ -0.7
NIPAL3-207ENST00000488155 NCF1BA6NI72 391 aaPredicted RBP10.66□□□□□ -0.7
NIPAL3-207ENST00000488155 NCF1CA8MVU1 366 aaPredicted RBP10.66□□□□□ -0.7
NIPAL3-207ENST00000488155 E2F3O00716 465 aa10.66□□□□□ -0.7
NIPAL3-207ENST00000488155 LDLRP01130 860 aa10.66□□□□□ -0.7
NIPAL3-207ENST00000488155 ZNF888P0CJ79 500 aaPredicted RBP10.66□□□□□ -0.7
NIPAL3-207ENST00000488155 NCF1P14598 390 aaPredicted RBP10.66□□□□□ -0.7
NIPAL3-207ENST00000488155 ZNF37AP17032 561 aaPredicted RBP10.66□□□□□ -0.7
NIPAL3-207ENST00000488155 SSTR1P30872 391 aa10.66□□□□□ -0.7
NIPAL3-207ENST00000488155 TNFSF10P50591 281 aa10.66□□□□□ -0.7
NIPAL3-207ENST00000488155 RAB8AP61006 207 aa10.66□□□□□ -0.7
NIPAL3-207ENST00000488155 ACTN3Q08043 901 aaPredicted RBP10.66□□□□□ -0.7
NIPAL3-207ENST00000488155 RBBP5Q15291 538 aaKnown RBP10.66□□□□□ -0.7
NIPAL3-207ENST00000488155 DEFB134Q4QY38 66 aa10.66□□□□□ -0.7
NIPAL3-207ENST00000488155 ABHD17BQ5VST6 288 aa10.66□□□□□ -0.7
NIPAL3-207ENST00000488155 ANKRD37Q7Z713 158 aa10.66□□□□□ -0.7
NIPAL3-207ENST00000488155 TMPRSS11BQ86T26 416 aa10.66□□□□□ -0.7
NIPAL3-207ENST00000488155 THOC6Q86W42 341 aaKnown RBP10.66□□□□□ -0.7
NIPAL3-207ENST00000488155 CEP97Q8IW35 865 aa10.66□□□□□ -0.7
NIPAL3-207ENST00000488155 SPATA6LQ8N4H0 392 aa10.66□□□□□ -0.7
NIPAL3-207ENST00000488155 ABHD11Q8NFV4 315 aa10.66□□□□□ -0.7
NIPAL3-207ENST00000488155 OR4K1Q8NGD4 311 aa10.66□□□□□ -0.7
NIPAL3-207ENST00000488155 ANKRD49Q8WVL7 239 aa10.66□□□□□ -0.7
NIPAL3-207ENST00000488155 ATL1Q8WXF7 558 aa10.66□□□□□ -0.7
NIPAL3-207ENST00000488155 HAS2Q92819 552 aa10.66□□□□□ -0.7
NIPAL3-207ENST00000488155 TSLPQ969D9 159 aa10.66□□□□□ -0.7
NIPAL3-207ENST00000488155 TAAR6Q96RI8 345 aa10.66□□□□□ -0.7
NIPAL3-207ENST00000488155 KCNK13Q9HB14 408 aa10.66□□□□□ -0.7
NIPAL3-207ENST00000488155 SAYSD1Q9NPB0 183 aa10.66□□□□□ -0.7
NIPAL3-207ENST00000488155 SMYD2Q9NRG4 433 aa10.66□□□□□ -0.7
NIPAL3-207ENST00000488155 OLAHQ9NV23 265 aa10.66□□□□□ -0.7
NIPAL3-207ENST00000488155 C19orf25Q9UFG5 118 aaPredicted RBP10.66□□□□□ -0.7
NIPAL3-207ENST00000488155 SLC22A14Q9Y267 594 aa10.66□□□□□ -0.7
NIPAL3-207ENST00000488155 A0A1W2PQ72 361 aa10.65□□□□□ -0.7
NIPAL3-207ENST00000488155 CXorf49A8MYA2 514 aaPredicted RBP10.65□□□□□ -0.7
NIPAL3-207ENST00000488155 LRRTM2O43300 516 aa10.65□□□□□ -0.7
NIPAL3-207ENST00000488155 CHST10O43529 356 aa10.65□□□□□ -0.7
NIPAL3-207ENST00000488155 B4GALT2O60909 372 aa10.65□□□□□ -0.7
NIPAL3-207ENST00000488155 CLDN1O95832 211 aa10.65□□□□□ -0.7
NIPAL3-207ENST00000488155 DDAH2O95865 285 aa10.65□□□□□ -0.7
NIPAL3-207ENST00000488155 ENO2P09104 434 aaPredicted RBP10.65□□□□□ -0.7
NIPAL3-207ENST00000488155 ICAM2P13598 275 aa10.65□□□□□ -0.7
NIPAL3-207ENST00000488155 EDN3P14138 238 aa10.65□□□□□ -0.7
NIPAL3-207ENST00000488155 ALOX12P18054 663 aa10.65□□□□□ -0.7
NIPAL3-207ENST00000488155 GDF5P43026 501 aa10.65□□□□□ -0.7
NIPAL3-207ENST00000488155 SCTRP47872 440 aa10.65□□□□□ -0.7
NIPAL3-207ENST00000488155 KCNK10P57789 538 aa10.65□□□□□ -0.7
NIPAL3-207ENST00000488155 PMP22Q01453 160 aa10.65□□□□□ -0.7
NIPAL3-207ENST00000488155 RGS1Q08116 209 aa10.65□□□□□ -0.7
NIPAL3-207ENST00000488155 C2orf54Q08AI8 447 aa10.65□□□□□ -0.7
NIPAL3-207ENST00000488155 ABRAXAS2Q15018 415 aa10.65□□□□□ -0.7
NIPAL3-207ENST00000488155 TSNQ15631 228 aaKnown RBP10.65□□□□□ -0.7
NIPAL3-207ENST00000488155 NSDHLQ15738 373 aa10.65□□□□□ -0.7
NIPAL3-207ENST00000488155 SFT2D3Q587I9 215 aa10.65□□□□□ -0.7
NIPAL3-207ENST00000488155 FBXO48Q5FWF7 155 aa10.65□□□□□ -0.7
NIPAL3-207ENST00000488155 CRYBG3Q68DQ2 2970 aa10.65□□□□□ -0.7
NIPAL3-207ENST00000488155 PAPD4Q6PIY7 484 aaKnown RBP10.65□□□□□ -0.7
NIPAL3-207ENST00000488155 RIPOR1Q6ZS17 1223 aa10.65□□□□□ -0.7
NIPAL3-207ENST00000488155 FRA10AC1Q70Z53 315 aa10.65□□□□□ -0.7
NIPAL3-207ENST00000488155 CYP4X1Q8N118 509 aa10.65□□□□□ -0.7
NIPAL3-207ENST00000488155 C17orf53Q8N3J3 647 aaPredicted RBP10.65□□□□□ -0.7
NIPAL3-207ENST00000488155 NKAPQ8N5F7 415 aaKnown RBP10.65□□□□□ -0.7
NIPAL3-207ENST00000488155 TBC1D19Q8N5T2 526 aa10.65□□□□□ -0.7
NIPAL3-207ENST00000488155 BCORP1Q8N888 145 aa10.65□□□□□ -0.7
NIPAL3-207ENST00000488155 PYROXD1Q8WU10 500 aa10.65□□□□□ -0.7
NIPAL3-207ENST00000488155 PDLIM5Q96HC4 596 aaKnown RBP10.65□□□□□ -0.7
NIPAL3-207ENST00000488155 VPS39Q96JC1 886 aa10.65□□□□□ -0.7
NIPAL3-207ENST00000488155 RHBGQ9H310 441 aa10.65□□□□□ -0.7
NIPAL3-207ENST00000488155 KLHL31Q9H511 634 aa10.65□□□□□ -0.7
NIPAL3-207ENST00000488155 CAB39LQ9H9S4 337 aa10.65□□□□□ -0.7
NIPAL3-207ENST00000488155 GPAMQ9HCL2 828 aa10.65□□□□□ -0.7
NIPAL3-207ENST00000488155 ANKRD10Q9NXR5 420 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms