RNA–Protein interactions for RNA: ENST00000485367.5

DDX56-212, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-212ENST00000485367 GIN1Q9NXP7 522 aa10.35□□□□□ -0.75
DDX56-212ENST00000485367 TDRKHQ9Y2W6 561 aaKnown RBP10.35□□□□□ -0.75
DDX56-212ENST00000485367 CFAP46Q8IYW2 2715 aa10.34□□□□□ -0.75
DDX56-212ENST00000485367 BOLA2-SMG1P6H3BVE0 249 aa10.34□□□□□ -0.75
DDX56-212ENST00000485367 FBP2O00757 339 aa10.34□□□□□ -0.75
DDX56-212ENST00000485367 NPHS1O60500 1241 aa10.34□□□□□ -0.75
DDX56-212ENST00000485367 NOL3O60936 208 aaKnown RBP10.34□□□□□ -0.75
DDX56-212ENST00000485367 C9P02748 559 aa10.34□□□□□ -0.75
DDX56-212ENST00000485367 MGAT1P26572 445 aa10.34□□□□□ -0.75
DDX56-212ENST00000485367 MC4RP32245 332 aa10.34□□□□□ -0.75
DDX56-212ENST00000485367 GRIA1P42261 906 aa10.34□□□□□ -0.75
DDX56-212ENST00000485367 SEPHS1P49903 392 aa10.34□□□□□ -0.75
DDX56-212ENST00000485367 C19orf57Q0VDD7 668 aa10.34□□□□□ -0.75
DDX56-212ENST00000485367 LY6DQ14210 128 aa10.34□□□□□ -0.75
DDX56-212ENST00000485367 ZRANB3Q5FWF4 1079 aa10.34□□□□□ -0.75
DDX56-212ENST00000485367 SAMD4BQ5PRF9 694 aaKnown RBP10.34□□□□□ -0.75
DDX56-212ENST00000485367 DEPDC1Q5TB30 811 aa10.34□□□□□ -0.75
DDX56-212ENST00000485367 METRNLQ641Q3 311 aa10.34□□□□□ -0.75
DDX56-212ENST00000485367 SLC2A7Q6PXP3 512 aa10.34□□□□□ -0.75
DDX56-212ENST00000485367 CEACAM20Q6UY09 585 aa10.34□□□□□ -0.75
DDX56-212ENST00000485367 ZBTB49Q6ZSB9 765 aa10.34□□□□□ -0.75
DDX56-212ENST00000485367 FAM92BQ6ZTR7 304 aa10.34□□□□□ -0.75
DDX56-212ENST00000485367 TAS2R42Q7RTR8 314 aa10.34□□□□□ -0.75
DDX56-212ENST00000485367 PEX5LQ8IYB4 626 aa10.34□□□□□ -0.75
DDX56-212ENST00000485367 CFAP206Q8IYR0 622 aa10.34□□□□□ -0.75
DDX56-212ENST00000485367 IL22RA1Q8N6P7 574 aa10.34□□□□□ -0.75
DDX56-212ENST00000485367 ZSCAN1Q8NBB4 408 aa10.34□□□□□ -0.75
DDX56-212ENST00000485367 GPR150Q8NGU9 434 aa10.34□□□□□ -0.75
DDX56-212ENST00000485367 TRUB1Q8WWH5 349 aaKnown RBP10.34□□□□□ -0.75
DDX56-212ENST00000485367 ZDHHC12Q96GR4 267 aa10.34□□□□□ -0.75
DDX56-212ENST00000485367 TEFMQ96QE5 360 aaKnown RBP10.34□□□□□ -0.75
DDX56-212ENST00000485367 COPS8Q99627 209 aa10.34□□□□□ -0.75
DDX56-212ENST00000485367 OLFM1Q99784 485 aa10.34□□□□□ -0.75
DDX56-212ENST00000485367 PAIP1Q9H074 479 aaKnown RBP10.34□□□□□ -0.75
DDX56-212ENST00000485367 WDR55Q9H6Y2 383 aaPredicted RBP10.34□□□□□ -0.75
DDX56-212ENST00000485367 APMAPQ9HDC9 416 aa10.34□□□□□ -0.75
DDX56-212ENST00000485367 SPAG4Q9NPE6 437 aa10.34□□□□□ -0.75
DDX56-212ENST00000485367 FBXO8Q9NRD0 319 aa10.34□□□□□ -0.75
DDX56-212ENST00000485367 ACSL5Q9ULC5 683 aa10.34□□□□□ -0.75
DDX56-212ENST00000485367 CFAP20Q9Y6A4 193 aaKnown RBP10.34□□□□□ -0.75
DDX56-212ENST00000485367 MAGEB16A2A368 324 aa10.34□□□□□ -0.75
DDX56-212ENST00000485367 CCDC78A2IDD5 438 aa10.34□□□□□ -0.75
DDX56-212ENST00000485367 CFAP99D6REC4 459 aa10.34□□□□□ -0.75
DDX56-212ENST00000485367 LSM1O15116 133 aaKnown RBP10.34□□□□□ -0.75
DDX56-212ENST00000485367 POLR1CO15160 346 aaPredicted RBP10.34□□□□□ -0.75
DDX56-212ENST00000485367 AKAP10O43572 662 aa10.34□□□□□ -0.75
DDX56-212ENST00000485367 RAD1O60671 282 aa10.34□□□□□ -0.75
DDX56-212ENST00000485367 C1QL1O75973 258 aa10.34□□□□□ -0.75
DDX56-212ENST00000485367 AP2A1O95782 977 aa10.34□□□□□ -0.75
DDX56-212ENST00000485367 ANKRD34CP0C6C1 535 aa10.34□□□□□ -0.75
DDX56-212ENST00000485367 MTHFD1P11586 935 aaKnown RBP10.34□□□□□ -0.75
DDX56-212ENST00000485367 WT1P19544 449 aaPredicted RBP10.34□□□□□ -0.75
DDX56-212ENST00000485367 CAPZBP47756 277 aa10.34□□□□□ -0.75
DDX56-212ENST00000485367 CDKN1CP49918 316 aaPredicted RBP10.34□□□□□ -0.75
DDX56-212ENST00000485367 CSRP3P50461 194 aa10.34□□□□□ -0.75
DDX56-212ENST00000485367 FOXM1Q08050 763 aa10.34□□□□□ -0.75
DDX56-212ENST00000485367 SQLEQ14534 574 aa10.34□□□□□ -0.75
DDX56-212ENST00000485367 PLCL1Q15111 1095 aa10.34□□□□□ -0.75
DDX56-212ENST00000485367 SPATS1Q496A3 300 aa10.34□□□□□ -0.75
DDX56-212ENST00000485367 GPR33Q49SQ1 333 aa10.34□□□□□ -0.75
DDX56-212ENST00000485367 BCL7AQ4VC05 210 aa10.34□□□□□ -0.75
DDX56-212ENST00000485367 FAM45BPQ6NSW5 357 aa10.34□□□□□ -0.75
DDX56-212ENST00000485367 TTC33Q6PID6 262 aaPredicted RBP10.34□□□□□ -0.75
DDX56-212ENST00000485367 ISLR2Q6UXK2 745 aa10.34□□□□□ -0.75
DDX56-212ENST00000485367 TMEM135Q86UB9 458 aa10.34□□□□□ -0.75
DDX56-212ENST00000485367 PLD6Q8N2A8 252 aaKnown RBP10.34□□□□□ -0.75
DDX56-212ENST00000485367 AFAP1L2Q8N4X5 818 aa10.34□□□□□ -0.75
DDX56-212ENST00000485367 FAM47BQ8NA70 645 aa10.34□□□□□ -0.75
DDX56-212ENST00000485367 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.34□□□□□ -0.75
DDX56-212ENST00000485367 OR2L2Q8NH16 312 aa10.34□□□□□ -0.75
DDX56-212ENST00000485367 TBC1D15Q8TC07 691 aa10.34□□□□□ -0.75
DDX56-212ENST00000485367 FAM45AQ8TCE6 357 aa10.34□□□□□ -0.75
DDX56-212ENST00000485367 LRTOMTQ8WZ04 291 aa10.34□□□□□ -0.75
DDX56-212ENST00000485367 ZUFSPQ96AP4 578 aa10.34□□□□□ -0.75
DDX56-212ENST00000485367 WBP1Q96G27 269 aa10.34□□□□□ -0.75
DDX56-212ENST00000485367 PHF12Q96QT6 1004 aa10.34□□□□□ -0.75
DDX56-212ENST00000485367 INSM2Q96T92 566 aaPredicted RBP10.34□□□□□ -0.75
DDX56-212ENST00000485367 ZPBPQ9BS86 351 aa10.34□□□□□ -0.75
DDX56-212ENST00000485367 TRIM15Q9C019 465 aa10.34□□□□□ -0.75
DDX56-212ENST00000485367 RPF2Q9H7B2 306 aaKnown RBP10.34□□□□□ -0.75
DDX56-212ENST00000485367 LIN28AQ9H9Z2 209 aaKnown RBP10.34□□□□□ -0.75
DDX56-212ENST00000485367 CXorf21Q9HAI6 301 aa10.34□□□□□ -0.75
DDX56-212ENST00000485367 C20orf96Q9NUD7 363 aaPredicted RBP10.34□□□□□ -0.75
DDX56-212ENST00000485367 NLE1Q9NVX2 485 aaPredicted RBP10.34□□□□□ -0.75
DDX56-212ENST00000485367 GID8Q9NWU2 228 aa10.34□□□□□ -0.75
DDX56-212ENST00000485367 ADA2Q9NZK5 511 aa10.34□□□□□ -0.75
DDX56-212ENST00000485367 PACSIN3Q9UKS6 424 aa10.34□□□□□ -0.75
DDX56-212ENST00000485367 COPG1Q9Y678 874 aaKnown RBP10.34□□□□□ -0.75
DDX56-212ENST00000485367 GCN1Q92616 2671 aaKnown RBP10.33□□□□□ -0.76
DDX56-212ENST00000485367 ERI2A8K979 691 aaKnown RBP10.33□□□□□ -0.76
DDX56-212ENST00000485367 AGAP14A8MT82 685 aa10.33□□□□□ -0.76
DDX56-212ENST00000485367 AP3B1O00203 1094 aa10.33□□□□□ -0.76
DDX56-212ENST00000485367 EIF3FO00303 357 aaPredicted RBP10.33□□□□□ -0.76
DDX56-212ENST00000485367 TOX3O15405 576 aaPredicted RBP10.33□□□□□ -0.76
DDX56-212ENST00000485367 SGTAO43765 313 aa10.33□□□□□ -0.76
DDX56-212ENST00000485367 C2P06681 752 aa10.33□□□□□ -0.76
DDX56-212ENST00000485367 SLC35G4P0C7Q5 338 aa10.33□□□□□ -0.76
DDX56-212ENST00000485367 PRSS56P0CW18 603 aa10.33□□□□□ -0.76
DDX56-212ENST00000485367 ATP1B2P14415 290 aaPredicted RBP10.33□□□□□ -0.76
DDX56-212ENST00000485367 LIFP15018 202 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms