RNA–Protein interactions for RNA: ENST00000484546.1

CDK5RAP2-217, Transcript of CDK5 regulatory subunit associated protein 2, humanhuman

TSL 1 (best)

Gene CDK5RAP2, Length 1,269 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2-217ENST00000484546 SOX17Q9H6I2 414 aaPredicted RBP11.15□□□□□ -0.62
CDK5RAP2-217ENST00000484546 ACTR8Q9H981 624 aa11.15□□□□□ -0.62
CDK5RAP2-217ENST00000484546 MKKSQ9NPJ1 570 aaPredicted RBP11.15□□□□□ -0.62
CDK5RAP2-217ENST00000484546 ACSS2Q9NR19 701 aa11.15□□□□□ -0.62
CDK5RAP2-217ENST00000484546 C14orf105Q9NVL8 296 aa11.15□□□□□ -0.62
CDK5RAP2-217ENST00000484546 GEMIN8Q9NWZ8 242 aaKnown RBP11.15□□□□□ -0.62
CDK5RAP2-217ENST00000484546 CTSFQ9UBX1 484 aa11.15□□□□□ -0.62
CDK5RAP2-217ENST00000484546 DCDC2Q9UHG0 476 aa11.15□□□□□ -0.62
CDK5RAP2-217ENST00000484546 HEATR5BQ9P2D3 2071 aa11.14□□□□□ -0.63
CDK5RAP2-217ENST00000484546 A0A088AWK7 358 aa11.14□□□□□ -0.63
CDK5RAP2-217ENST00000484546 H0YIG0 161 aa11.14□□□□□ -0.63
CDK5RAP2-217ENST00000484546 STX16-NPEPL1H3BU86 382 aa11.14□□□□□ -0.63
CDK5RAP2-217ENST00000484546 STX16O14662 325 aa11.14□□□□□ -0.63
CDK5RAP2-217ENST00000484546 NSA2O95478 260 aaKnown RBP11.14□□□□□ -0.63
CDK5RAP2-217ENST00000484546 IGHEP01854 428 aa11.14□□□□□ -0.63
CDK5RAP2-217ENST00000484546 CAPN1P07384 714 aa11.14□□□□□ -0.63
CDK5RAP2-217ENST00000484546 GSTA1P08263 222 aa11.14□□□□□ -0.63
CDK5RAP2-217ENST00000484546 SFTPCP11686 197 aa11.14□□□□□ -0.63
CDK5RAP2-217ENST00000484546 PCNAP12004 261 aa11.14□□□□□ -0.63
CDK5RAP2-217ENST00000484546 MTHFD2P13995 350 aa11.14□□□□□ -0.63
CDK5RAP2-217ENST00000484546 ZNF10P21506 573 aaPredicted RBP11.14□□□□□ -0.63
CDK5RAP2-217ENST00000484546 CCT5P48643 541 aa11.14□□□□□ -0.63
CDK5RAP2-217ENST00000484546 RRADP55042 308 aa11.14□□□□□ -0.63
CDK5RAP2-217ENST00000484546 TGM3Q08188 693 aa11.14□□□□□ -0.63
CDK5RAP2-217ENST00000484546 IL10RAQ13651 578 aa11.14□□□□□ -0.63
CDK5RAP2-217ENST00000484546 DOC2AQ14183 400 aa11.14□□□□□ -0.63
CDK5RAP2-217ENST00000484546 PCBP2Q15366 365 aaKnown RBP eCLIP11.14□□□□□ -0.63
CDK5RAP2-217ENST00000484546 RBBP7Q16576 425 aa11.14□□□□□ -0.63
CDK5RAP2-217ENST00000484546 TBR1Q16650 682 aa11.14□□□□□ -0.63
CDK5RAP2-217ENST00000484546 TOR1AIP1Q5JTV8 583 aa11.14□□□□□ -0.63
CDK5RAP2-217ENST00000484546 MRPL14Q6P1L8 145 aaKnown RBP11.14□□□□□ -0.63
CDK5RAP2-217ENST00000484546 METTL2BQ6P1Q9 378 aaKnown RBP11.14□□□□□ -0.63
CDK5RAP2-217ENST00000484546 MED27Q6P2C8 311 aa11.14□□□□□ -0.63
CDK5RAP2-217ENST00000484546 SHISA6Q6ZSJ9 500 aa11.14□□□□□ -0.63
CDK5RAP2-217ENST00000484546 DTWD1Q8N5C7 304 aa11.14□□□□□ -0.63
CDK5RAP2-217ENST00000484546 LSM14AQ8ND56 463 aaKnown RBP11.14□□□□□ -0.63
CDK5RAP2-217ENST00000484546 OR2W6PQ8NHA6 318 aa11.14□□□□□ -0.63
CDK5RAP2-217ENST00000484546 NT5CQ8TCD5 201 aa11.14□□□□□ -0.63
CDK5RAP2-217ENST00000484546 REPS1Q96D71 796 aa11.14□□□□□ -0.63
CDK5RAP2-217ENST00000484546 TM4SF19Q96DZ7 209 aa11.14□□□□□ -0.63
CDK5RAP2-217ENST00000484546 SEC16BQ96JE7 1060 aa11.14□□□□□ -0.63
CDK5RAP2-217ENST00000484546 CRB3Q9BUF7 120 aa11.14□□□□□ -0.63
CDK5RAP2-217ENST00000484546 SPNS1Q9H2V7 528 aa11.14□□□□□ -0.63
CDK5RAP2-217ENST00000484546 SYNPO2LQ9H987 977 aa11.14□□□□□ -0.63
CDK5RAP2-217ENST00000484546 NAALAD2Q9Y3Q0 740 aa11.14□□□□□ -0.63
CDK5RAP2-217ENST00000484546 MAP4K5Q9Y4K4 846 aa11.14□□□□□ -0.63
CDK5RAP2-217ENST00000484546 SLC22A7Q9Y694 548 aa11.14□□□□□ -0.63
CDK5RAP2-217ENST00000484546 ARGFXA6NJG6 315 aa11.13□□□□□ -0.63
CDK5RAP2-217ENST00000484546 SGK494L7N484 410 aa11.13□□□□□ -0.63
CDK5RAP2-217ENST00000484546 PSMD12O00232 456 aaPredicted RBP11.13□□□□□ -0.63
CDK5RAP2-217ENST00000484546 COPEO14579 308 aa11.13□□□□□ -0.63
CDK5RAP2-217ENST00000484546 FFAR3O14843 346 aa11.13□□□□□ -0.63
CDK5RAP2-217ENST00000484546 GPR42O15529 346 aa11.13□□□□□ -0.63
CDK5RAP2-217ENST00000484546 KLK8O60259 260 aa11.13□□□□□ -0.63
CDK5RAP2-217ENST00000484546 KLHL18O94889 574 aa11.13□□□□□ -0.63
CDK5RAP2-217ENST00000484546 SIX3O95343 332 aaPredicted RBP11.13□□□□□ -0.63
CDK5RAP2-217ENST00000484546 MED26O95402 600 aa11.13□□□□□ -0.63
CDK5RAP2-217ENST00000484546 ONECUT2O95948 504 aa11.13□□□□□ -0.63
CDK5RAP2-217ENST00000484546 HEXBP07686 556 aa11.13□□□□□ -0.63
CDK5RAP2-217ENST00000484546 SERPINA6P08185 405 aa11.13□□□□□ -0.63
CDK5RAP2-217ENST00000484546 NUDT17P0C025 328 aa11.13□□□□□ -0.63
CDK5RAP2-217ENST00000484546 ZGLP1P0C6A0 271 aa11.13□□□□□ -0.63
CDK5RAP2-217ENST00000484546 ZNF888P0CJ79 500 aaPredicted RBP11.13□□□□□ -0.63
CDK5RAP2-217ENST00000484546 ALOX12P18054 663 aa11.13□□□□□ -0.63
CDK5RAP2-217ENST00000484546 SERPINB1P30740 379 aa11.13□□□□□ -0.63
CDK5RAP2-217ENST00000484546 CCNG1P51959 295 aa11.13□□□□□ -0.63
CDK5RAP2-217ENST00000484546 POLE2P56282 527 aa11.13□□□□□ -0.63
CDK5RAP2-217ENST00000484546 MAT1AQ00266 395 aaKnown RBP11.13□□□□□ -0.63
CDK5RAP2-217ENST00000484546 RASA2Q15283 850 aa11.13□□□□□ -0.63
CDK5RAP2-217ENST00000484546 TBCCQ15814 346 aa11.13□□□□□ -0.63
CDK5RAP2-217ENST00000484546 NKG7Q16617 165 aa11.13□□□□□ -0.63
CDK5RAP2-217ENST00000484546 DEFB134Q4QY38 66 aa11.13□□□□□ -0.63
CDK5RAP2-217ENST00000484546 FAM69BQ5VUD6 431 aa11.13□□□□□ -0.63
CDK5RAP2-217ENST00000484546 TTC19Q6DKK2 380 aaPredicted RBP11.13□□□□□ -0.63
CDK5RAP2-217ENST00000484546 TRIM40Q6P9F5 258 aa11.13□□□□□ -0.63
CDK5RAP2-217ENST00000484546 COX15Q7KZN9 410 aa11.13□□□□□ -0.63
CDK5RAP2-217ENST00000484546 GOLGA7Q7Z5G4 137 aa11.13□□□□□ -0.63
CDK5RAP2-217ENST00000484546 ANKRD53Q8N9V6 530 aa11.13□□□□□ -0.63
CDK5RAP2-217ENST00000484546 CLEC1AQ8NC01 280 aa11.13□□□□□ -0.63
CDK5RAP2-217ENST00000484546 STT3BQ8TCJ2 826 aa11.13□□□□□ -0.63
CDK5RAP2-217ENST00000484546 SLC39A7Q92504 469 aa11.13□□□□□ -0.63
CDK5RAP2-217ENST00000484546 MOCOSQ96EN8 888 aa11.13□□□□□ -0.63
CDK5RAP2-217ENST00000484546 FER1L6-AS2Q96M78 137 aa11.13□□□□□ -0.63
CDK5RAP2-217ENST00000484546 CENPKQ9BS16 269 aa11.13□□□□□ -0.63
CDK5RAP2-217ENST00000484546 ROPN1BQ9BZX4 212 aaPredicted RBP11.13□□□□□ -0.63
CDK5RAP2-217ENST00000484546 SLC26A1Q9H2B4 701 aa11.13□□□□□ -0.63
CDK5RAP2-217ENST00000484546 NT5DC2Q9H857 520 aa11.13□□□□□ -0.63
CDK5RAP2-217ENST00000484546 IPPKQ9H8X2 491 aa11.13□□□□□ -0.63
CDK5RAP2-217ENST00000484546 COPS7BQ9H9Q2 264 aaPredicted RBP11.13□□□□□ -0.63
CDK5RAP2-217ENST00000484546 ROPN1Q9HAT0 212 aaPredicted RBP11.13□□□□□ -0.63
CDK5RAP2-217ENST00000484546 SEMA3GQ9NS98 782 aa11.13□□□□□ -0.63
CDK5RAP2-217ENST00000484546 SLC22A11Q9NSA0 550 aa11.13□□□□□ -0.63
CDK5RAP2-217ENST00000484546 HCN3Q9P1Z3 774 aa11.13□□□□□ -0.63
CDK5RAP2-217ENST00000484546 PLAAQ9Y263 795 aa11.13□□□□□ -0.63
CDK5RAP2-217ENST00000484546 MRPS2Q9Y399 296 aaKnown RBP11.13□□□□□ -0.63
CDK5RAP2-217ENST00000484546 ASB1Q9Y576 335 aa11.13□□□□□ -0.63
CDK5RAP2-217ENST00000484546 ATMQ13315 3056 aa11.12□□□□□ -0.63
CDK5RAP2-217ENST00000484546 A0A1W2PPM1 405 aa11.12□□□□□ -0.63
CDK5RAP2-217ENST00000484546 ZNF860A6NHJ4 632 aa11.12□□□□□ -0.63
CDK5RAP2-217ENST00000484546 FOXS1O43638 330 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms