RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 EHD1Q9H4M9 534 aa9.76□□□□□ -0.85
HDAC6-222ENST00000478095 SOX17Q9H6I2 414 aaPredicted RBP9.76□□□□□ -0.85
HDAC6-222ENST00000478095 ZNF304Q9HCX3 659 aa9.76□□□□□ -0.85
HDAC6-222ENST00000478095 PCTPQ9UKL6 214 aa9.76□□□□□ -0.85
HDAC6-222ENST00000478095 TCFL5Q9UL49 500 aa9.76□□□□□ -0.85
HDAC6-222ENST00000478095 EMCNQ9ULC0 261 aa9.76□□□□□ -0.85
HDAC6-222ENST00000478095 PTRH2Q9Y3E5 179 aaKnown RBP9.76□□□□□ -0.85
HDAC6-222ENST00000478095 TNPO3Q9Y5L0 923 aaKnown RBP9.76□□□□□ -0.85
HDAC6-222ENST00000478095 STX16-NPEPL1H3BU86 382 aa9.75□□□□□ -0.85
HDAC6-222ENST00000478095 SGK494L7N484 410 aa9.75□□□□□ -0.85
HDAC6-222ENST00000478095 COPEO14579 308 aa9.75□□□□□ -0.85
HDAC6-222ENST00000478095 STX16O14662 325 aa9.75□□□□□ -0.85
HDAC6-222ENST00000478095 DLX3O60479 287 aa9.75□□□□□ -0.85
HDAC6-222ENST00000478095 GLRA3O75311 464 aa9.75□□□□□ -0.85
HDAC6-222ENST00000478095 KLF7O75840 302 aaPredicted RBP9.75□□□□□ -0.85
HDAC6-222ENST00000478095 GSTA1P08263 222 aa9.75□□□□□ -0.85
HDAC6-222ENST00000478095 ZNF888P0CJ79 500 aaPredicted RBP9.75□□□□□ -0.85
HDAC6-222ENST00000478095 PCNAP12004 261 aa9.75□□□□□ -0.85
HDAC6-222ENST00000478095 TSPAN8P19075 237 aa9.75□□□□□ -0.85
HDAC6-222ENST00000478095 TAC1P20366 129 aa9.75□□□□□ -0.85
HDAC6-222ENST00000478095 CXCR2P25025 360 aa9.75□□□□□ -0.85
HDAC6-222ENST00000478095 AHRP35869 848 aa9.75□□□□□ -0.85
HDAC6-222ENST00000478095 FOLR3P41439 243 aa9.75□□□□□ -0.85
HDAC6-222ENST00000478095 RAB8AP61006 207 aa9.75□□□□□ -0.85
HDAC6-222ENST00000478095 MC1RQ01726 317 aa9.75□□□□□ -0.85
HDAC6-222ENST00000478095 RGS1Q08116 209 aa9.75□□□□□ -0.85
HDAC6-222ENST00000478095 ZNF844Q08AG5 666 aa9.75□□□□□ -0.85
HDAC6-222ENST00000478095 PWP1Q13610 501 aa9.75□□□□□ -0.85
HDAC6-222ENST00000478095 DEFB109BQ30KR1 87 aa9.75□□□□□ -0.85
HDAC6-222ENST00000478095 KRT71Q3SY84 523 aa9.75□□□□□ -0.85
HDAC6-222ENST00000478095 PAGE2BQ5JRK9 111 aa9.75□□□□□ -0.85
HDAC6-222ENST00000478095 TOR1AIP1Q5JTV8 583 aa9.75□□□□□ -0.85
HDAC6-222ENST00000478095 FAM219BQ5XKK7 198 aa9.75□□□□□ -0.85
HDAC6-222ENST00000478095 PRMT9Q6P2P2 845 aa9.75□□□□□ -0.85
HDAC6-222ENST00000478095 OVCH1Q7RTY7 1134 aa9.75□□□□□ -0.85
HDAC6-222ENST00000478095 VN1R5Q7Z5H4 357 aa9.75□□□□□ -0.85
HDAC6-222ENST00000478095 SYVN1Q86TM6 617 aa9.75□□□□□ -0.85
HDAC6-222ENST00000478095 LCA5Q86VQ0 697 aa9.75□□□□□ -0.85
HDAC6-222ENST00000478095 PDSS2Q86YH6 399 aa9.75□□□□□ -0.85
HDAC6-222ENST00000478095 SRRM1Q8IYB3 904 aaKnown RBP9.75□□□□□ -0.85
HDAC6-222ENST00000478095 RIBC1Q8N443 379 aaPredicted RBP9.75□□□□□ -0.85
HDAC6-222ENST00000478095 AMER3Q8N944 861 aa9.75□□□□□ -0.85
HDAC6-222ENST00000478095 TRPV3Q8NET8 790 aa9.75□□□□□ -0.85
HDAC6-222ENST00000478095 NT5CQ8TCD5 201 aa9.75□□□□□ -0.85
HDAC6-222ENST00000478095 CREB3L4Q8TEY5 395 aa9.75□□□□□ -0.85
HDAC6-222ENST00000478095 SNRNP27Q8WVK2 155 aaKnown RBP9.75□□□□□ -0.85
HDAC6-222ENST00000478095 EXTL1Q92935 676 aa9.75□□□□□ -0.85
HDAC6-222ENST00000478095 FKBP10Q96AY3 582 aa9.75□□□□□ -0.85
HDAC6-222ENST00000478095 WDR34Q96EX3 536 aa9.75□□□□□ -0.85
HDAC6-222ENST00000478095 CDK15Q96Q40 435 aa9.75□□□□□ -0.85
HDAC6-222ENST00000478095 EFCAB11Q9BUY7 163 aa9.75□□□□□ -0.85
HDAC6-222ENST00000478095 ROPN1BQ9BZX4 212 aaPredicted RBP9.75□□□□□ -0.85
HDAC6-222ENST00000478095 AICDAQ9GZX7 198 aa9.75□□□□□ -0.85
HDAC6-222ENST00000478095 KLHL31Q9H511 634 aa9.75□□□□□ -0.85
HDAC6-222ENST00000478095 NOL11Q9H8H0 719 aaKnown RBP9.75□□□□□ -0.85
HDAC6-222ENST00000478095 IPPKQ9H8X2 491 aa9.75□□□□□ -0.85
HDAC6-222ENST00000478095 ACTR8Q9H981 624 aa9.75□□□□□ -0.85
HDAC6-222ENST00000478095 ROPN1Q9HAT0 212 aaPredicted RBP9.75□□□□□ -0.85
HDAC6-222ENST00000478095 ANKHQ9HCJ1 492 aa9.75□□□□□ -0.85
HDAC6-222ENST00000478095 HCN3Q9P1Z3 774 aa9.75□□□□□ -0.85
HDAC6-222ENST00000478095 TRPC4Q9UBN4 977 aa9.75□□□□□ -0.85
HDAC6-222ENST00000478095 DCDC2Q9UHG0 476 aa9.75□□□□□ -0.85
HDAC6-222ENST00000478095 LGALS13Q9UHV8 139 aa9.75□□□□□ -0.85
HDAC6-222ENST00000478095 ZNF490Q9ULM2 529 aaPredicted RBP9.75□□□□□ -0.85
HDAC6-222ENST00000478095 TMCO1Q9UM00 188 aa9.75□□□□□ -0.85
HDAC6-222ENST00000478095 PADI2Q9Y2J8 665 aa9.75□□□□□ -0.85
HDAC6-222ENST00000478095 NAALAD2Q9Y3Q0 740 aa9.75□□□□□ -0.85
HDAC6-222ENST00000478095 A0A0G2JN53 185 aa9.74□□□□□ -0.85
HDAC6-222ENST00000478095 C4orf51C9J302 202 aa9.74□□□□□ -0.85
HDAC6-222ENST00000478095 OR7A17O14581 309 aa9.74□□□□□ -0.85
HDAC6-222ENST00000478095 SH3BGRLO75368 114 aa9.74□□□□□ -0.85
HDAC6-222ENST00000478095 SPAG7O75391 227 aa9.74□□□□□ -0.85
HDAC6-222ENST00000478095 RDH16O75452 317 aa9.74□□□□□ -0.85
HDAC6-222ENST00000478095 ERLIN1O75477 346 aa9.74□□□□□ -0.85
HDAC6-222ENST00000478095 WFS1O76024 890 aa9.74□□□□□ -0.85
HDAC6-222ENST00000478095 KLHL18O94889 574 aa9.74□□□□□ -0.85
HDAC6-222ENST00000478095 PROCP04070 461 aa9.74□□□□□ -0.85
HDAC6-222ENST00000478095 UMODP07911 640 aa9.74□□□□□ -0.85
HDAC6-222ENST00000478095 RPS17P08708 135 aaKnown RBP9.74□□□□□ -0.85
HDAC6-222ENST00000478095 PIM1P11309 404 aaPredicted RBP9.74□□□□□ -0.85
HDAC6-222ENST00000478095 HNRNPH1P31943 449 aaKnown RBP9.74□□□□□ -0.85
HDAC6-222ENST00000478095 OTX2P32243 289 aa9.74□□□□□ -0.85
HDAC6-222ENST00000478095 AVPR1BP47901 424 aa9.74□□□□□ -0.85
HDAC6-222ENST00000478095 PIK3CGP48736 1102 aa9.74□□□□□ -0.85
HDAC6-222ENST00000478095 CDH13P55290 713 aa9.74□□□□□ -0.85
HDAC6-222ENST00000478095 OLR1P78380 273 aa9.74□□□□□ -0.85
HDAC6-222ENST00000478095 HYAL2Q12891 473 aa9.74□□□□□ -0.85
HDAC6-222ENST00000478095 DDX39BQ13838 428 aaKnown RBP9.74□□□□□ -0.85
HDAC6-222ENST00000478095 FAM53BQ14153 422 aa9.74□□□□□ -0.85
HDAC6-222ENST00000478095 TBCCQ15814 346 aa9.74□□□□□ -0.85
HDAC6-222ENST00000478095 NKG7Q16617 165 aa9.74□□□□□ -0.85
HDAC6-222ENST00000478095 HIST2H2ACQ16777 129 aaPredicted RBP9.74□□□□□ -0.85
HDAC6-222ENST00000478095 UGT8Q16880 541 aa9.74□□□□□ -0.85
HDAC6-222ENST00000478095 DEFB134Q4QY38 66 aa9.74□□□□□ -0.85
HDAC6-222ENST00000478095 VWA2Q5GFL6 755 aa9.74□□□□□ -0.85
HDAC6-222ENST00000478095 HIST2H2AA3Q6FI13 130 aa9.74□□□□□ -0.85
HDAC6-222ENST00000478095 GRHL2Q6ISB3 625 aa9.74□□□□□ -0.85
HDAC6-222ENST00000478095 MED27Q6P2C8 311 aa9.74□□□□□ -0.85
HDAC6-222ENST00000478095 TRABD2AQ86V40 505 aa9.74□□□□□ -0.85
HDAC6-222ENST00000478095 CNPY4Q8N129 248 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms