RNA–Protein interactions for RNA: ENST00000476858.5

APTX-220, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,068 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-220ENST00000476858 PSMC3IPQ9P2W1 217 aaPredicted RBP11.8□□□□□ -0.52
APTX-220ENST00000476858 KCNE2Q9Y6J6 123 aa11.8□□□□□ -0.52
APTX-220ENST00000476858 IKBKGQ9Y6K9 419 aa11.8□□□□□ -0.52
APTX-220ENST00000476858 ERVH48-1M5A8F1 160 aa11.79□□□□□ -0.52
APTX-220ENST00000476858 SOCS6O14544 535 aa11.79□□□□□ -0.52
APTX-220ENST00000476858 FBLP22087 321 aaKnown RBP11.79□□□□□ -0.52
APTX-220ENST00000476858 POLE2P56282 527 aa11.79□□□□□ -0.52
APTX-220ENST00000476858 RAB8AP61006 207 aa11.79□□□□□ -0.52
APTX-220ENST00000476858 KLC1Q07866 573 aa11.79□□□□□ -0.52
APTX-220ENST00000476858 CHIT1Q13231 466 aa11.79□□□□□ -0.52
APTX-220ENST00000476858 RAPSNQ13702 412 aa11.79□□□□□ -0.52
APTX-220ENST00000476858 XKR6Q5GH73 641 aa11.79□□□□□ -0.52
APTX-220ENST00000476858 TOR1AIP1Q5JTV8 583 aa11.79□□□□□ -0.52
APTX-220ENST00000476858 CDKL4Q5MAI5 379 aa11.79□□□□□ -0.52
APTX-220ENST00000476858 YOD1Q5VVQ6 348 aaPredicted RBP11.79□□□□□ -0.52
APTX-220ENST00000476858 FAAH2Q6GMR7 532 aa11.79□□□□□ -0.52
APTX-220ENST00000476858 WDR93Q6P2C0 686 aa11.79□□□□□ -0.52
APTX-220ENST00000476858 BORAQ6PGQ7 559 aa11.79□□□□□ -0.52
APTX-220ENST00000476858 GOLGA7Q7Z5G4 137 aa11.79□□□□□ -0.52
APTX-220ENST00000476858 MRGPREQ86SM8 312 aa11.79□□□□□ -0.52
APTX-220ENST00000476858 AFAP1L2Q8N4X5 818 aa11.79□□□□□ -0.52
APTX-220ENST00000476858 NT5CQ8TCD5 201 aa11.79□□□□□ -0.52
APTX-220ENST00000476858 STT3BQ8TCJ2 826 aa11.79□□□□□ -0.52
APTX-220ENST00000476858 UTP15Q8TED0 518 aaKnown RBP11.79□□□□□ -0.52
APTX-220ENST00000476858 C8orf44Q96CB5 159 aa11.79□□□□□ -0.52
APTX-220ENST00000476858 CDK15Q96Q40 435 aa11.79□□□□□ -0.52
APTX-220ENST00000476858 EFHD1Q9BUP0 239 aa11.79□□□□□ -0.52
APTX-220ENST00000476858 SLC6A16Q9GZN6 736 aa11.79□□□□□ -0.52
APTX-220ENST00000476858 DRC3Q9H069 523 aa11.79□□□□□ -0.52
APTX-220ENST00000476858 ZBTB26Q9HCK0 441 aa11.79□□□□□ -0.52
APTX-220ENST00000476858 TRPC4Q9UBN4 977 aa11.79□□□□□ -0.52
APTX-220ENST00000476858 GPN3Q9UHW5 284 aaPredicted RBP11.79□□□□□ -0.52
APTX-220ENST00000476858 ZFP69BQ9UJL9 534 aa11.79□□□□□ -0.52
APTX-220ENST00000476858 MAN2B2Q9Y2E5 1009 aa11.79□□□□□ -0.52
APTX-220ENST00000476858 NAALAD2Q9Y3Q0 740 aa11.79□□□□□ -0.52
APTX-220ENST00000476858 HS3ST3B1Q9Y662 390 aa11.79□□□□□ -0.52
APTX-220ENST00000476858 FAM208BQ5VWN6 2430 aa11.79□□□□□ -0.52
APTX-220ENST00000476858 BSNQ9UPA5 3926 aa11.78□□□□□ -0.52
APTX-220ENST00000476858 IGLV3-12A0A075B6K2 115 aa11.78□□□□□ -0.52
APTX-220ENST00000476858 A8MT66 165 aa11.78□□□□□ -0.52
APTX-220ENST00000476858 K7EPI3 171 aa11.78□□□□□ -0.52
APTX-220ENST00000476858 E2F3O00716 465 aa11.78□□□□□ -0.52
APTX-220ENST00000476858 OR7A17O14581 309 aa11.78□□□□□ -0.52
APTX-220ENST00000476858 WFS1O76024 890 aa11.78□□□□□ -0.52
APTX-220ENST00000476858 KLHL18O94889 574 aa11.78□□□□□ -0.52
APTX-220ENST00000476858 S100BP04271 92 aaPredicted RBP11.78□□□□□ -0.52
APTX-220ENST00000476858 ITGB2P05107 769 aa11.78□□□□□ -0.52
APTX-220ENST00000476858 ZGLP1P0C6A0 271 aa11.78□□□□□ -0.52
APTX-220ENST00000476858 SMIM10L1P0DMW3 83 aa11.78□□□□□ -0.52
APTX-220ENST00000476858 GFAPP14136 432 aa11.78□□□□□ -0.52
APTX-220ENST00000476858 GNAZP19086 355 aa11.78□□□□□ -0.52
APTX-220ENST00000476858 CNTFP26441 200 aa11.78□□□□□ -0.52
APTX-220ENST00000476858 EEF1DP29692 281 aaKnown RBP11.78□□□□□ -0.52
APTX-220ENST00000476858 FOLR3P41439 243 aa11.78□□□□□ -0.52
APTX-220ENST00000476858 PIK3CGP48736 1102 aa11.78□□□□□ -0.52
APTX-220ENST00000476858 ALDH18A1P54886 795 aaKnown RBP11.78□□□□□ -0.52
APTX-220ENST00000476858 DEFB134Q4QY38 66 aa11.78□□□□□ -0.52
APTX-220ENST00000476858 CRTC2Q53ET0 693 aaPredicted RBP11.78□□□□□ -0.52
APTX-220ENST00000476858 LRRC70Q7Z2Q7 622 aa11.78□□□□□ -0.52
APTX-220ENST00000476858 UBE3DQ7Z6J8 389 aa11.78□□□□□ -0.52
APTX-220ENST00000476858 TCAIMQ8N3R3 496 aa11.78□□□□□ -0.52
APTX-220ENST00000476858 OR52B6Q8NGF0 335 aa11.78□□□□□ -0.52
APTX-220ENST00000476858 FKBP10Q96AY3 582 aa11.78□□□□□ -0.52
APTX-220ENST00000476858 THAP11Q96EK4 314 aa11.78□□□□□ -0.52
APTX-220ENST00000476858 WDR34Q96EX3 536 aa11.78□□□□□ -0.52
APTX-220ENST00000476858 SMIM10Q96HG1 83 aa11.78□□□□□ -0.52
APTX-220ENST00000476858 AIF1LQ9BQI0 150 aa11.78□□□□□ -0.52
APTX-220ENST00000476858 YIPF2Q9BWQ6 316 aa11.78□□□□□ -0.52
APTX-220ENST00000476858 SORBS1Q9BX66 1292 aaKnown RBP11.78□□□□□ -0.52
APTX-220ENST00000476858 SLC26A1Q9H2B4 701 aa11.78□□□□□ -0.52
APTX-220ENST00000476858 ZNF71Q9NQZ8 489 aaPredicted RBP11.78□□□□□ -0.52
APTX-220ENST00000476858 OPTCQ9UBM4 332 aa11.78□□□□□ -0.52
APTX-220ENST00000476858 POLHQ9Y253 713 aa11.78□□□□□ -0.52
APTX-220ENST00000476858 RNF11Q9Y3C5 154 aa11.78□□□□□ -0.52
APTX-220ENST00000476858 MED13Q9UHV7 2174 aa11.78□□□□□ -0.52
APTX-220ENST00000476858 TNRC6AQ8NDV7 1962 aaKnown RBP11.78□□□□□ -0.52
APTX-220ENST00000476858 FAM227AF5H4B4 570 aa11.77□□□□□ -0.53
APTX-220ENST00000476858 CLGNO14967 610 aa11.77□□□□□ -0.53
APTX-220ENST00000476858 DLX3O60479 287 aa11.77□□□□□ -0.53
APTX-220ENST00000476858 GALR3O60755 368 aaPredicted RBP11.77□□□□□ -0.53
APTX-220ENST00000476858 IPO13O94829 963 aaKnown RBP11.77□□□□□ -0.53
APTX-220ENST00000476858 RECKO95980 971 aa11.77□□□□□ -0.53
APTX-220ENST00000476858 CELA2AP08217 269 aa11.77□□□□□ -0.53
APTX-220ENST00000476858 CREB1P16220 341 aa11.77□□□□□ -0.53
APTX-220ENST00000476858 GRK3P35626 688 aa11.77□□□□□ -0.53
APTX-220ENST00000476858 AHRP35869 848 aa11.77□□□□□ -0.53
APTX-220ENST00000476858 CCR10P46092 362 aa11.77□□□□□ -0.53
APTX-220ENST00000476858 MC1RQ01726 317 aa11.77□□□□□ -0.53
APTX-220ENST00000476858 IRF8Q02556 426 aa11.77□□□□□ -0.53
APTX-220ENST00000476858 Q0VFX4 171 aa11.77□□□□□ -0.53
APTX-220ENST00000476858 FAM53BQ14153 422 aa11.77□□□□□ -0.53
APTX-220ENST00000476858 E2F2Q14209 437 aa11.77□□□□□ -0.53
APTX-220ENST00000476858 PCBP2Q15366 365 aaKnown RBP eCLIP11.77□□□□□ -0.53
APTX-220ENST00000476858 GARNL3Q5VVW2 1013 aa11.77□□□□□ -0.53
APTX-220ENST00000476858 PRMT9Q6P2P2 845 aa11.77□□□□□ -0.53
APTX-220ENST00000476858 KIRREL2Q6UWL6 708 aa11.77□□□□□ -0.53
APTX-220ENST00000476858 TMIGD1Q6UXZ0 262 aa11.77□□□□□ -0.53
APTX-220ENST00000476858 LANCL3Q6ZV70 420 aa11.77□□□□□ -0.53
APTX-220ENST00000476858 TAOK1Q7L7X3 1001 aa11.77□□□□□ -0.53
APTX-220ENST00000476858 CAMKVQ8NCB2 501 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms