RNA–Protein interactions for RNA: ENST00000473334.1

PTP4A1-203, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 3

Gene PTP4A1, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-203ENST00000473334 ALOX12P18054 663 aa21.31■■□□□ 1
PTP4A1-203ENST00000473334 GNAZP19086 355 aa21.31■■□□□ 1
PTP4A1-203ENST00000473334 VARSP26640 1264 aaKnown RBP21.31■■□□□ 1
PTP4A1-203ENST00000473334 GDF5P43026 501 aa21.31■■□□□ 1
PTP4A1-203ENST00000473334 SKP1P63208 163 aa21.31■■□□□ 1
PTP4A1-203ENST00000473334 OR4D1Q15615 310 aa21.31■■□□□ 1
PTP4A1-203ENST00000473334 PLEKHN1Q494U1 663 aaPredicted RBP21.31■■□□□ 1
PTP4A1-203ENST00000473334 MINDY4Q4G0A6 757 aa21.31■■□□□ 1
PTP4A1-203ENST00000473334 CDKL4Q5MAI5 379 aa21.31■■□□□ 1
PTP4A1-203ENST00000473334 NIPAL1Q6NVV3 410 aa21.31■■□□□ 1
PTP4A1-203ENST00000473334 Q6ZS92 163 aa21.31■■□□□ 1
PTP4A1-203ENST00000473334 IQCKQ8N0W5 287 aa21.31■■□□□ 1
PTP4A1-203ENST00000473334 ANKRD53Q8N9V6 530 aa21.31■■□□□ 1
PTP4A1-203ENST00000473334 MNS1Q8NEH6 495 aa21.31■■□□□ 1
PTP4A1-203ENST00000473334 TRPV3Q8NET8 790 aa21.31■■□□□ 1
PTP4A1-203ENST00000473334 PPP4R1Q8TF05 950 aa21.31■■□□□ 1
PTP4A1-203ENST00000473334 METTL21AQ8WXB1 218 aa21.31■■□□□ 1
PTP4A1-203ENST00000473334 TMEM79Q9BSE2 394 aa21.31■■□□□ 1
PTP4A1-203ENST00000473334 ILKAPQ9H0C8 392 aaPredicted RBP21.31■■□□□ 1
PTP4A1-203ENST00000473334 ZNF700Q9H0M5 742 aa21.31■■□□□ 1
PTP4A1-203ENST00000473334 EPS8L2Q9H6S3 715 aa21.31■■□□□ 1
PTP4A1-203ENST00000473334 WWOXQ9NZC7 414 aa21.31■■□□□ 1
PTP4A1-203ENST00000473334 ZNF860A6NHJ4 632 aa21.3■■□□□ 1
PTP4A1-203ENST00000473334 VPS4BO75351 444 aa21.3■■□□□ 1
PTP4A1-203ENST00000473334 TUBB4AP04350 444 aa21.3■■□□□ 1
PTP4A1-203ENST00000473334 PRR35P0CG20 571 aa21.3■■□□□ 1
PTP4A1-203ENST00000473334 GGT5P36269 586 aa21.3■■□□□ 1
PTP4A1-203ENST00000473334 CDC16Q13042 620 aa21.3■■□□□ 1
PTP4A1-203ENST00000473334 PCOLCEQ15113 449 aa21.3■■□□□ 1
PTP4A1-203ENST00000473334 RBBP5Q15291 538 aaKnown RBP21.3■■□□□ 1
PTP4A1-203ENST00000473334 PRR30Q53SZ7 412 aaPredicted RBP21.3■■□□□ 1
PTP4A1-203ENST00000473334 SULT1C3Q6IMI6 304 aa21.3■■□□□ 1
PTP4A1-203ENST00000473334 CEP128Q6ZU80 1094 aa21.3■■□□□ 1
PTP4A1-203ENST00000473334 RAPH1Q70E73 1250 aa21.3■■□□□ 1
PTP4A1-203ENST00000473334 ABHD13Q7L211 337 aa21.3■■□□□ 1
PTP4A1-203ENST00000473334 CMC1Q7Z7K0 106 aa21.3■■□□□ 1
PTP4A1-203ENST00000473334 SHISA5Q8N114 240 aa21.3■■□□□ 1
PTP4A1-203ENST00000473334 KIAA1191Q96A73 305 aa21.3■■□□□ 1
PTP4A1-203ENST00000473334 WDR77Q9BQA1 342 aaPredicted RBP21.3■■□□□ 1
PTP4A1-203ENST00000473334 CNOT10Q9H9A5 744 aaKnown RBP21.3■■□□□ 1
PTP4A1-203ENST00000473334 MTRF1LQ9UGC7 380 aaKnown RBP21.3■■□□□ 1
PTP4A1-203ENST00000473334 VPS4AQ9UN37 437 aa21.3■■□□□ 1
PTP4A1-203ENST00000473334 SHANK1Q9Y566 2161 aa21.3■■□□□ 1
PTP4A1-203ENST00000473334 FLNCQ14315 2725 aa21.29■■□□□ 1
PTP4A1-203ENST00000473334 RELNP78509 3460 aa21.29■■□□□ 1
PTP4A1-203ENST00000473334 PRRC2CQ9Y520 2896 aaKnown RBP21.29■■□□□ 1
PTP4A1-203ENST00000473334 URADA6NGE7 173 aa21.29■■□□□ 1
PTP4A1-203ENST00000473334 KIF2AO00139 706 aaPredicted RBP21.29■■□□□ 1
PTP4A1-203ENST00000473334 TAPBPO15533 448 aa21.29■■□□□ 1
PTP4A1-203ENST00000473334 GALR3O60755 368 aaPredicted RBP21.29■■□□□ 1
PTP4A1-203ENST00000473334 SERPINA7P05543 415 aa21.29■■□□□ 1
PTP4A1-203ENST00000473334 ZNF888P0CJ79 500 aaPredicted RBP21.29■■□□□ 1
PTP4A1-203ENST00000473334 SLC35E2BP0CK96 405 aa21.29■■□□□ 1
PTP4A1-203ENST00000473334 C1GALT1C1LP0DN25 315 aa21.29■■□□□ 1
PTP4A1-203ENST00000473334 IL10P22301 178 aa21.29■■□□□ 1
PTP4A1-203ENST00000473334 CRABP2P29373 138 aa21.29■■□□□ 1
PTP4A1-203ENST00000473334 DEFB134Q4QY38 66 aa21.29■■□□□ 1
PTP4A1-203ENST00000473334 ISLR2Q6UXK2 745 aa21.29■■□□□ 1
PTP4A1-203ENST00000473334 SLCO4C1Q6ZQN7 724 aa21.29■■□□□ 1
PTP4A1-203ENST00000473334 RIPOR1Q6ZS17 1223 aa21.29■■□□□ 1
PTP4A1-203ENST00000473334 NOA1Q8NC60 698 aaKnown RBP21.29■■□□□ 1
PTP4A1-203ENST00000473334 PDPRQ8NCN5 879 aa21.29■■□□□ 1
PTP4A1-203ENST00000473334 GALNT11Q8NCW6 608 aa21.29■■□□□ 1
PTP4A1-203ENST00000473334 OR1F2PQ96R84 312 aa21.29■■□□□ 1
PTP4A1-203ENST00000473334 CYTH2Q99418 400 aa21.29■■□□□ 1
PTP4A1-203ENST00000473334 CAPS2Q9BXY5 557 aa21.29■■□□□ 1
PTP4A1-203ENST00000473334 SLC6A16Q9GZN6 736 aa21.29■■□□□ 1
PTP4A1-203ENST00000473334 DNAJC11Q9NVH1 559 aa21.29■■□□□ 1
PTP4A1-203ENST00000473334 GPRC5BQ9NZH0 403 aa21.29■■□□□ 1
PTP4A1-203ENST00000473334 CD274Q9NZQ7 290 aa21.29■■□□□ 1
PTP4A1-203ENST00000473334 C19orf25Q9UFG5 118 aaPredicted RBP21.29■■□□□ 1
PTP4A1-203ENST00000473334 DMGDHQ9UI17 866 aaKnown RBP21.29■■□□□ 1
PTP4A1-203ENST00000473334 RNF112Q9ULX5 631 aa21.29■■□□□ 1
PTP4A1-203ENST00000473334 CTAGE15A4D2H0 777 aa21.28■■□□□ 1
PTP4A1-203ENST00000473334 H2AFYO75367 372 aaKnown RBP21.28■■□□□ 1
PTP4A1-203ENST00000473334 S100BP04271 92 aaPredicted RBP21.28■■□□□ 1
PTP4A1-203ENST00000473334 CTAGE8P0CG41 777 aa21.28■■□□□ 1
PTP4A1-203ENST00000473334 PHBP35232 272 aa21.28■■□□□ 1
PTP4A1-203ENST00000473334 GMPRP36959 345 aa21.28■■□□□ 1
PTP4A1-203ENST00000473334 HSPA7P48741 367 aa21.28■■□□□ 1
PTP4A1-203ENST00000473334 AP2B1P63010 937 aa21.28■■□□□ 1
PTP4A1-203ENST00000473334 MFAP5Q13361 173 aa21.28■■□□□ 1
PTP4A1-203ENST00000473334 CRB2Q5IJ48 1285 aa21.28■■□□□ 1
PTP4A1-203ENST00000473334 TBC1D1Q86TI0 1168 aaPredicted RBP21.28■■□□□ 1
PTP4A1-203ENST00000473334 CTAGE6Q86UF2 777 aa21.28■■□□□ 1
PTP4A1-203ENST00000473334 CTAGE4Q8IX94 777 aa21.28■■□□□ 1
PTP4A1-203ENST00000473334 OR5T3Q8NGG3 340 aa21.28■■□□□ 1
PTP4A1-203ENST00000473334 UTP15Q8TED0 518 aaKnown RBP21.28■■□□□ 1
PTP4A1-203ENST00000473334 PEX11GQ96HA9 241 aa21.28■■□□□ 1
PTP4A1-203ENST00000473334 LMF1Q96S06 567 aa21.28■■□□□ 1
PTP4A1-203ENST00000473334 TUBB6Q9BUF5 446 aa21.28■■□□□ 1
PTP4A1-203ENST00000473334 MAP10Q9P2G4 905 aa21.28■■□□□ 1
PTP4A1-203ENST00000473334 CSAG2Q9Y5P2 127 aa21.28■■□□□ 1
PTP4A1-203ENST00000473334 SERPINA6P08185 405 aa21.27■■□□□ 1
PTP4A1-203ENST00000473334 ICAM2P13598 275 aa21.27■■□□□ 1
PTP4A1-203ENST00000473334 AGTR2P50052 363 aa21.27■■□□□ 1
PTP4A1-203ENST00000473334 HYAL2Q12891 473 aa21.27■■□□□ 1
PTP4A1-203ENST00000473334 SLBPQ14493 270 aaKnown RBP eCLIP21.27■■□□□ 1
PTP4A1-203ENST00000473334 FBXO48Q5FWF7 155 aa21.27■■□□□ 1
PTP4A1-203ENST00000473334 LINC00696Q6ZRV3 163 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms