RNA–Protein interactions for RNA: ENST00000471322.2

HSPG2-208, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 1,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-208ENST00000471322 CEACAM1P13688 526 aa16.78■□□□□ 0.28
HSPG2-208ENST00000471322 HSD17B1P14061 328 aa16.78■□□□□ 0.28
HSPG2-208ENST00000471322 PRPS1L1P21108 318 aa16.78■□□□□ 0.28
HSPG2-208ENST00000471322 SLC6A2P23975 617 aa16.78■□□□□ 0.28
HSPG2-208ENST00000471322 SERPINB1P30740 379 aa16.78■□□□□ 0.28
HSPG2-208ENST00000471322 RAB28P51157 221 aa16.78■□□□□ 0.28
HSPG2-208ENST00000471322 BLKP51451 505 aa16.78■□□□□ 0.28
HSPG2-208ENST00000471322 PWP1Q13610 501 aa16.78■□□□□ 0.28
HSPG2-208ENST00000471322 DDX39BQ13838 428 aaKnown RBP16.78■□□□□ 0.28
HSPG2-208ENST00000471322 PAGE3Q5JUK9 113 aa16.78■□□□□ 0.28
HSPG2-208ENST00000471322 ABRAXAS1Q6UWZ7 409 aa16.78■□□□□ 0.28
HSPG2-208ENST00000471322 SLC15A3Q8IY34 581 aa16.78■□□□□ 0.28
HSPG2-208ENST00000471322 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.78■□□□□ 0.28
HSPG2-208ENST00000471322 RNF148Q8N7C7 305 aa16.78■□□□□ 0.28
HSPG2-208ENST00000471322 SLC13A3Q8WWT9 602 aa16.78■□□□□ 0.28
HSPG2-208ENST00000471322 TESCQ96BS2 214 aa16.78■□□□□ 0.28
HSPG2-208ENST00000471322 MENTQ9BUN1 341 aa16.78■□□□□ 0.28
HSPG2-208ENST00000471322 SPASTQ9UBP0 616 aa16.78■□□□□ 0.28
HSPG2-208ENST00000471322 PACSIN3Q9UKS6 424 aa16.78■□□□□ 0.28
HSPG2-208ENST00000471322 DLGAP4Q9Y2H0 992 aa16.78■□□□□ 0.28
HSPG2-208ENST00000471322 PLEKHM1Q9Y4G2 1056 aa16.78■□□□□ 0.28
HSPG2-208ENST00000471322 PRORSD1PA6NEY8 169 aa16.77■□□□□ 0.27
HSPG2-208ENST00000471322 MAGEB17A8MXT2 336 aa16.77■□□□□ 0.27
HSPG2-208ENST00000471322 DNAJA2O60884 412 aa16.77■□□□□ 0.27
HSPG2-208ENST00000471322 PGRP06401 933 aa16.77■□□□□ 0.27
HSPG2-208ENST00000471322 ANPEPP15144 967 aa16.77■□□□□ 0.27
HSPG2-208ENST00000471322 SDC1P18827 310 aa16.77■□□□□ 0.27
HSPG2-208ENST00000471322 ASMTP46597 345 aa16.77■□□□□ 0.27
HSPG2-208ENST00000471322 BNIP2Q12982 314 aa16.77■□□□□ 0.27
HSPG2-208ENST00000471322 CLCA4Q14CN2 919 aa16.77■□□□□ 0.27
HSPG2-208ENST00000471322 RPE65Q16518 533 aa16.77■□□□□ 0.27
HSPG2-208ENST00000471322 MAPKAPK3Q16644 382 aa16.77■□□□□ 0.27
HSPG2-208ENST00000471322 DPY19L1Q2PZI1 675 aa16.77■□□□□ 0.27
HSPG2-208ENST00000471322 INAVAQ3KP66 663 aa16.77■□□□□ 0.27
HSPG2-208ENST00000471322 FAM174BQ3ZCQ3 159 aa16.77■□□□□ 0.27
HSPG2-208ENST00000471322 TMIGD1Q6UXZ0 262 aa16.77■□□□□ 0.27
HSPG2-208ENST00000471322 MSANTD1Q6ZTZ1 278 aa16.77■□□□□ 0.27
HSPG2-208ENST00000471322 DHDDSQ86SQ9 333 aa16.77■□□□□ 0.27
HSPG2-208ENST00000471322 ABHD11Q8NFV4 315 aa16.77■□□□□ 0.27
HSPG2-208ENST00000471322 BAHD1Q8TBE0 780 aaPredicted RBP16.77■□□□□ 0.27
HSPG2-208ENST00000471322 CNDP2Q96KP4 475 aaKnown RBP16.77■□□□□ 0.27
HSPG2-208ENST00000471322 ANKRD27Q96NW4 1050 aa16.77■□□□□ 0.27
HSPG2-208ENST00000471322 AIF1LQ9BQI0 150 aa16.77■□□□□ 0.27
HSPG2-208ENST00000471322 TRNAU1APQ9NX07 287 aaKnown RBP16.77■□□□□ 0.27
HSPG2-208ENST00000471322 SIRT5Q9NXA8 310 aa16.77■□□□□ 0.27
HSPG2-208ENST00000471322 FTSJ1Q9UET6 329 aa16.77■□□□□ 0.27
HSPG2-208ENST00000471322 DOLKQ9UPQ8 538 aa16.77■□□□□ 0.27
HSPG2-208ENST00000471322 AP3M1Q9Y2T2 418 aa16.77■□□□□ 0.27
HSPG2-208ENST00000471322 PCDHA9Q9Y5H5 950 aa16.77■□□□□ 0.27
HSPG2-208ENST00000471322 DGKBQ9Y6T7 804 aa16.77■□□□□ 0.27
HSPG2-208ENST00000471322 YY2O15391 372 aa16.76■□□□□ 0.27
HSPG2-208ENST00000471322 KCNH1O95259 989 aa16.76■□□□□ 0.27
HSPG2-208ENST00000471322 ANP32DO95626 131 aa16.76■□□□□ 0.27
HSPG2-208ENST00000471322 MTHFD1P11586 935 aaKnown RBP16.76■□□□□ 0.27
HSPG2-208ENST00000471322 CDH1P12830 882 aa16.76■□□□□ 0.27
HSPG2-208ENST00000471322 S100A3P33764 101 aa16.76■□□□□ 0.27
HSPG2-208ENST00000471322 PTDSS1P48651 473 aaKnown RBP16.76■□□□□ 0.27
HSPG2-208ENST00000471322 CCR8P51685 355 aa16.76■□□□□ 0.27
HSPG2-208ENST00000471322 DGKQP52824 942 aa16.76■□□□□ 0.27
HSPG2-208ENST00000471322 EEFSECP57772 596 aaKnown RBP16.76■□□□□ 0.27
HSPG2-208ENST00000471322 C21orf58P58505 322 aa16.76■□□□□ 0.27
HSPG2-208ENST00000471322 MS4A2Q01362 244 aa16.76■□□□□ 0.27
HSPG2-208ENST00000471322 SLC2A7Q6PXP3 512 aa16.76■□□□□ 0.27
HSPG2-208ENST00000471322 FAM129CQ86XR2 697 aa16.76■□□□□ 0.27
HSPG2-208ENST00000471322 SFTPA2Q8IWL1 248 aa16.76■□□□□ 0.27
HSPG2-208ENST00000471322 OR2L8Q8NGY9 312 aa16.76■□□□□ 0.27
HSPG2-208ENST00000471322 OR4C6Q8NH72 309 aa16.76■□□□□ 0.27
HSPG2-208ENST00000471322 CHTF18Q8WVB6 975 aa16.76■□□□□ 0.27
HSPG2-208ENST00000471322 SLC39A3Q9BRY0 314 aa16.76■□□□□ 0.27
HSPG2-208ENST00000471322 TRIM15Q9C019 465 aa16.76■□□□□ 0.27
HSPG2-208ENST00000471322 MUC13Q9H3R2 512 aa16.76■□□□□ 0.27
HSPG2-208ENST00000471322 NT5DC2Q9H857 520 aa16.76■□□□□ 0.27
HSPG2-208ENST00000471322 RMND5AQ9H871 391 aa16.76■□□□□ 0.27
HSPG2-208ENST00000471322 PRDM8Q9NQV8 689 aa16.76■□□□□ 0.27
HSPG2-208ENST00000471322 LRP4O75096 1905 aa16.75■□□□□ 0.27
HSPG2-208ENST00000471322 CELSR3Q9NYQ7 3312 aa16.75■□□□□ 0.27
HSPG2-208ENST00000471322 MAP3K7O43318 606 aa16.75■□□□□ 0.27
HSPG2-208ENST00000471322 LDOC1O95751 146 aaPredicted RBP16.75■□□□□ 0.27
HSPG2-208ENST00000471322 TCN1P20061 433 aaPredicted RBP16.75■□□□□ 0.27
HSPG2-208ENST00000471322 PTX3P26022 381 aaPredicted RBP16.75■□□□□ 0.27
HSPG2-208ENST00000471322 AK4P27144 223 aaPredicted RBP16.75■□□□□ 0.27
HSPG2-208ENST00000471322 PKLRP30613 574 aa16.75■□□□□ 0.27
HSPG2-208ENST00000471322 RPS13P62277 151 aaKnown RBP16.75■□□□□ 0.27
HSPG2-208ENST00000471322 SRSF11Q05519 484 aaKnown RBP16.75■□□□□ 0.27
HSPG2-208ENST00000471322 CAPRIN1Q14444 709 aaKnown RBP16.75■□□□□ 0.27
HSPG2-208ENST00000471322 ELOCQ15369 112 aa16.75■□□□□ 0.27
HSPG2-208ENST00000471322 DUS1LQ6P1R4 473 aaKnown RBP16.75■□□□□ 0.27
HSPG2-208ENST00000471322 GALNT18Q6P9A2 607 aa16.75■□□□□ 0.27
HSPG2-208ENST00000471322 DLEU7Q6UYE1 221 aa16.75■□□□□ 0.27
HSPG2-208ENST00000471322 TAF8Q7Z7C8 310 aa16.75■□□□□ 0.27
HSPG2-208ENST00000471322 KRTCAP2Q8N6L1 136 aa16.75■□□□□ 0.27
HSPG2-208ENST00000471322 HIPK4Q8NE63 616 aa16.75■□□□□ 0.27
HSPG2-208ENST00000471322 BHLHE22Q8NFJ8 381 aaPredicted RBP16.75■□□□□ 0.27
HSPG2-208ENST00000471322 TMEM125Q96AQ2 219 aa16.75■□□□□ 0.27
HSPG2-208ENST00000471322 C11orf24Q96F05 449 aaPredicted RBP16.75■□□□□ 0.27
HSPG2-208ENST00000471322 SLC45A3Q96JT2 553 aa16.75■□□□□ 0.27
HSPG2-208ENST00000471322 TSSK3Q96PN8 268 aa16.75■□□□□ 0.27
HSPG2-208ENST00000471322 OR52E6Q96RD3 313 aa16.75■□□□□ 0.27
HSPG2-208ENST00000471322 SH3GL1Q99961 368 aa16.75■□□□□ 0.27
HSPG2-208ENST00000471322 KIR3DX1Q9H7L2 352 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms