RNA–Protein interactions for RNA: ENST00000470837.1

CCM2-204, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-204ENST00000470837 PLA2G16P53816 162 aa9.33□□□□□ -0.92
CCM2-204ENST00000470837 CLNS1AP54105 237 aaKnown RBP9.33□□□□□ -0.92
CCM2-204ENST00000470837 GFERP55789 205 aa9.33□□□□□ -0.92
CCM2-204ENST00000470837 NME5P56597 212 aa9.33□□□□□ -0.92
CCM2-204ENST00000470837 KCNK10P57789 538 aa9.33□□□□□ -0.92
CCM2-204ENST00000470837 PPP1CAP62136 330 aa9.33□□□□□ -0.92
CCM2-204ENST00000470837 KLF10Q13118 480 aa9.33□□□□□ -0.92
CCM2-204ENST00000470837 CYLC2Q14093 348 aaPredicted RBP9.33□□□□□ -0.92
CCM2-204ENST00000470837 NDUFA9Q16795 377 aa9.33□□□□□ -0.92
CCM2-204ENST00000470837 PROX2Q3B8N5 592 aa9.33□□□□□ -0.92
CCM2-204ENST00000470837 MMEL1Q495T6 779 aa9.33□□□□□ -0.92
CCM2-204ENST00000470837 PDCD4Q53EL6 469 aaKnown RBP9.33□□□□□ -0.92
CCM2-204ENST00000470837 AGKQ53H12 422 aa9.33□□□□□ -0.92
CCM2-204ENST00000470837 TOR1AIP1Q5JTV8 583 aa9.33□□□□□ -0.92
CCM2-204ENST00000470837 CCNYL2Q5T2Q4 361 aa9.33□□□□□ -0.92
CCM2-204ENST00000470837 FAM219BQ5XKK7 198 aa9.33□□□□□ -0.92
CCM2-204ENST00000470837 FCRL6Q6DN72 434 aa9.33□□□□□ -0.92
CCM2-204ENST00000470837 NOXRED1Q6NXP6 359 aa9.33□□□□□ -0.92
CCM2-204ENST00000470837 TMEM71Q6P5X7 295 aa9.33□□□□□ -0.92
CCM2-204ENST00000470837 CYB5D1Q6P9G0 228 aa9.33□□□□□ -0.92
CCM2-204ENST00000470837 CYP20A1Q6UW02 462 aa9.33□□□□□ -0.92
CCM2-204ENST00000470837 RNF44Q7L0R7 432 aa9.33□□□□□ -0.92
CCM2-204ENST00000470837 NUDT13Q86X67 352 aa9.33□□□□□ -0.92
CCM2-204ENST00000470837 LIX1Q8N485 282 aa9.33□□□□□ -0.92
CCM2-204ENST00000470837 RNF175Q8N4F7 328 aa9.33□□□□□ -0.92
CCM2-204ENST00000470837 C1orf52Q8N6N3 182 aaKnown RBP9.33□□□□□ -0.92
CCM2-204ENST00000470837 CSNK1A1LQ8N752 337 aa9.33□□□□□ -0.92
CCM2-204ENST00000470837 CDC26Q8NHZ8 85 aa9.33□□□□□ -0.92
CCM2-204ENST00000470837 CHTF18Q8WVB6 975 aa9.33□□□□□ -0.92
CCM2-204ENST00000470837 APIPQ96GX9 242 aa9.33□□□□□ -0.92
CCM2-204ENST00000470837 NSL1Q96IY1 281 aa9.33□□□□□ -0.92
CCM2-204ENST00000470837 KCNC2Q96PR1 638 aa9.33□□□□□ -0.92
CCM2-204ENST00000470837 F2RL3Q96RI0 385 aa9.33□□□□□ -0.92
CCM2-204ENST00000470837 GFM1Q96RP9 751 aaKnown RBP9.33□□□□□ -0.92
CCM2-204ENST00000470837 PRPF18Q99633 342 aaKnown RBP9.33□□□□□ -0.92
CCM2-204ENST00000470837 MS4A8Q9BY19 250 aa9.33□□□□□ -0.92
CCM2-204ENST00000470837 TWSG1Q9GZX9 223 aa9.33□□□□□ -0.92
CCM2-204ENST00000470837 LRRN3Q9H3W5 708 aa9.33□□□□□ -0.92
CCM2-204ENST00000470837 FAM86C1Q9NVL1 165 aa9.33□□□□□ -0.92
CCM2-204ENST00000470837 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.33□□□□□ -0.92
CCM2-204ENST00000470837 TMEM45AQ9NWC5 275 aa9.33□□□□□ -0.92
CCM2-204ENST00000470837 ASIC5Q9NY37 505 aa9.33□□□□□ -0.92
CCM2-204ENST00000470837 ZIM2Q9NZV7 527 aa9.33□□□□□ -0.92
CCM2-204ENST00000470837 TAGLN3Q9UI15 199 aa9.33□□□□□ -0.92
CCM2-204ENST00000470837 PLCL2Q9UPR0 1127 aa9.33□□□□□ -0.92
CCM2-204ENST00000470837 HCN4Q9Y3Q4 1203 aa9.33□□□□□ -0.92
CCM2-204ENST00000470837 CCL27Q9Y4X3 112 aa9.33□□□□□ -0.92
CCM2-204ENST00000470837 KNL1Q8NG31 2342 aa9.32□□□□□ -0.92
CCM2-204ENST00000470837 DYTNA2CJ06 578 aa9.32□□□□□ -0.92
CCM2-204ENST00000470837 LRIT2A6NDA9 550 aa9.32□□□□□ -0.92
CCM2-204ENST00000470837 A8MU76 341 aa9.32□□□□□ -0.92
CCM2-204ENST00000470837 H0YGG7 62 aa9.32□□□□□ -0.92
CCM2-204ENST00000470837 ANGPT2O15123 496 aa9.32□□□□□ -0.92
CCM2-204ENST00000470837 ERI3O43414 337 aaKnown RBP9.32□□□□□ -0.92
CCM2-204ENST00000470837 CTSVO60911 334 aa9.32□□□□□ -0.92
CCM2-204ENST00000470837 UBOX5O94941 541 aa9.32□□□□□ -0.92
CCM2-204ENST00000470837 KLK1P06870 262 aa9.32□□□□□ -0.92
CCM2-204ENST00000470837 ALDOCP09972 364 aaKnown RBP9.32□□□□□ -0.92
CCM2-204ENST00000470837 G6PDP11413 515 aa9.32□□□□□ -0.92
CCM2-204ENST00000470837 BCKDHAP12694 445 aa9.32□□□□□ -0.92
CCM2-204ENST00000470837 PRPS1L1P21108 318 aa9.32□□□□□ -0.92
CCM2-204ENST00000470837 CALB2P22676 271 aa9.32□□□□□ -0.92
CCM2-204ENST00000470837 TIA1P31483 386 aaKnown RBP eCLIP9.32□□□□□ -0.92
CCM2-204ENST00000470837 HPCAL1P37235 193 aa9.32□□□□□ -0.92
CCM2-204ENST00000470837 RPL3P39023 403 aaKnown RBP9.32□□□□□ -0.92
CCM2-204ENST00000470837 TSFMP43897 325 aaKnown RBP9.32□□□□□ -0.92
CCM2-204ENST00000470837 GSTM5P46439 218 aa9.32□□□□□ -0.92
CCM2-204ENST00000470837 LSSP48449 732 aa9.32□□□□□ -0.92
CCM2-204ENST00000470837 ACADVLP49748 655 aa9.32□□□□□ -0.92
CCM2-204ENST00000470837 SEPHS1P49903 392 aa9.32□□□□□ -0.92
CCM2-204ENST00000470837 ARFIP1P53367 373 aa9.32□□□□□ -0.92
CCM2-204ENST00000470837 MAPK12P53778 367 aa9.32□□□□□ -0.92
CCM2-204ENST00000470837 DIO3P55073 304 aa9.32□□□□□ -0.92
CCM2-204ENST00000470837 VSX2P58304 361 aaPredicted RBP9.32□□□□□ -0.92
CCM2-204ENST00000470837 ARF3P61204 181 aaPredicted RBP9.32□□□□□ -0.92
CCM2-204ENST00000470837 CCL7P80098 99 aa9.32□□□□□ -0.92
CCM2-204ENST00000470837 ZNF763Q0D2J5 394 aa9.32□□□□□ -0.92
CCM2-204ENST00000470837 STX5Q13190 355 aa9.32□□□□□ -0.92
CCM2-204ENST00000470837 SQSTM1Q13501 440 aa9.32□□□□□ -0.92
CCM2-204ENST00000470837 SPIDRQ14159 915 aa9.32□□□□□ -0.92
CCM2-204ENST00000470837 TCTE1Q5JU00 501 aa9.32□□□□□ -0.92
CCM2-204ENST00000470837 PERM1Q5SV97 790 aa9.32□□□□□ -0.92
CCM2-204ENST00000470837 FAM91A1Q658Y4 838 aa9.32□□□□□ -0.92
CCM2-204ENST00000470837 OR4C11Q6IEV9 310 aa9.32□□□□□ -0.92
CCM2-204ENST00000470837 ADNP2Q6IQ32 1131 aa9.32□□□□□ -0.92
CCM2-204ENST00000470837 NIPAL1Q6NVV3 410 aa9.32□□□□□ -0.92
CCM2-204ENST00000470837 FBXO42Q6P3S6 717 aa9.32□□□□□ -0.92
CCM2-204ENST00000470837 COMMD6Q7Z4G1 85 aa9.32□□□□□ -0.92
CCM2-204ENST00000470837 PRSS42Q7Z5A4 293 aa9.32□□□□□ -0.92
CCM2-204ENST00000470837 MCATQ8IVS2 390 aaKnown RBP9.32□□□□□ -0.92
CCM2-204ENST00000470837 NAXDQ8IW45 347 aa9.32□□□□□ -0.92
CCM2-204ENST00000470837 GPR135Q8IZ08 494 aa9.32□□□□□ -0.92
CCM2-204ENST00000470837 METTL4Q8N3J2 472 aa9.32□□□□□ -0.92
CCM2-204ENST00000470837 TTC29Q8NA56 475 aaPredicted RBP9.32□□□□□ -0.92
CCM2-204ENST00000470837 GLB1L3Q8NCI6 653 aaPredicted RBP9.32□□□□□ -0.92
CCM2-204ENST00000470837 OR2L5Q8NG80 312 aa9.32□□□□□ -0.92
CCM2-204ENST00000470837 OR4D9Q8NGE8 314 aa9.32□□□□□ -0.92
CCM2-204ENST00000470837 RP9Q8TA86 221 aaKnown RBP9.32□□□□□ -0.92
CCM2-204ENST00000470837 NT5CQ8TCD5 201 aa9.32□□□□□ -0.92
CCM2-204ENST00000470837 GAL3ST3Q96A11 431 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms