RNA–Protein interactions for RNA: ENST00000462125.5

C9orf3-210, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 961 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-210ENST00000462125 ZFP69BQ9UJL9 534 aa12.5□□□□□ -0.41
C9orf3-210ENST00000462125 KCNE2Q9Y6J6 123 aa12.5□□□□□ -0.41
C9orf3-210ENST00000462125 DOCK10Q96BY6 2186 aa12.5□□□□□ -0.41
C9orf3-210ENST00000462125 NUP210LQ5VU65 1888 aa12.49□□□□□ -0.41
C9orf3-210ENST00000462125 SGK494L7N484 410 aa12.49□□□□□ -0.41
C9orf3-210ENST00000462125 JRKO75564 520 aa12.49□□□□□ -0.41
C9orf3-210ENST00000462125 RHOXF2BP0C7M4 288 aa12.49□□□□□ -0.41
C9orf3-210ENST00000462125 PRR35P0CG20 571 aa12.49□□□□□ -0.41
C9orf3-210ENST00000462125 SMIM10L1P0DMW3 83 aa12.49□□□□□ -0.41
C9orf3-210ENST00000462125 IL1RNP18510 177 aa12.49□□□□□ -0.41
C9orf3-210ENST00000462125 GNLYP22749 145 aa12.49□□□□□ -0.41
C9orf3-210ENST00000462125 GGT5P36269 586 aa12.49□□□□□ -0.41
C9orf3-210ENST00000462125 GP5P40197 560 aa12.49□□□□□ -0.41
C9orf3-210ENST00000462125 MAGEA4P43358 317 aa12.49□□□□□ -0.41
C9orf3-210ENST00000462125 UQCRFS1P47985 274 aa12.49□□□□□ -0.41
C9orf3-210ENST00000462125 SLC6A12P48065 614 aa12.49□□□□□ -0.41
C9orf3-210ENST00000462125 SLC12A2P55011 1212 aa12.49□□□□□ -0.41
C9orf3-210ENST00000462125 MEF2AQ02078 507 aaPredicted RBP12.49□□□□□ -0.41
C9orf3-210ENST00000462125 GUCY2DQ02846 1103 aa12.49□□□□□ -0.41
C9orf3-210ENST00000462125 HERC3Q15034 1050 aa12.49□□□□□ -0.41
C9orf3-210ENST00000462125 PCOLCEQ15113 449 aa12.49□□□□□ -0.41
C9orf3-210ENST00000462125 TSNQ15631 228 aaKnown RBP12.49□□□□□ -0.41
C9orf3-210ENST00000462125 CDKL4Q5MAI5 379 aa12.49□□□□□ -0.41
C9orf3-210ENST00000462125 C8orf74Q6P047 294 aa12.49□□□□□ -0.41
C9orf3-210ENST00000462125 NXPE4Q6UWF7 544 aa12.49□□□□□ -0.41
C9orf3-210ENST00000462125 CAPN12Q6ZSI9 719 aa12.49□□□□□ -0.41
C9orf3-210ENST00000462125 CISD2Q8N5K1 135 aaKnown RBP12.49□□□□□ -0.41
C9orf3-210ENST00000462125 TBC1D19Q8N5T2 526 aa12.49□□□□□ -0.41
C9orf3-210ENST00000462125 NOA1Q8NC60 698 aaKnown RBP12.49□□□□□ -0.41
C9orf3-210ENST00000462125 PLPP5Q8NEB5 264 aa12.49□□□□□ -0.41
C9orf3-210ENST00000462125 DNAJB14Q8TBM8 379 aa12.49□□□□□ -0.41
C9orf3-210ENST00000462125 RHBDF1Q96CC6 855 aa12.49□□□□□ -0.41
C9orf3-210ENST00000462125 C19orf60Q96EN9 201 aa12.49□□□□□ -0.41
C9orf3-210ENST00000462125 TSPAN17Q96FV3 270 aa12.49□□□□□ -0.41
C9orf3-210ENST00000462125 SMIM10Q96HG1 83 aa12.49□□□□□ -0.41
C9orf3-210ENST00000462125 UBXN10Q96LJ8 280 aa12.49□□□□□ -0.41
C9orf3-210ENST00000462125 RBBP8Q99708 897 aa12.49□□□□□ -0.41
C9orf3-210ENST00000462125 RHOXF2Q9BQY4 288 aa12.49□□□□□ -0.41
C9orf3-210ENST00000462125 VN1R1Q9GZP7 353 aa12.49□□□□□ -0.41
C9orf3-210ENST00000462125 ILKAPQ9H0C8 392 aaPredicted RBP12.49□□□□□ -0.41
C9orf3-210ENST00000462125 SPNS1Q9H2V7 528 aa12.49□□□□□ -0.41
C9orf3-210ENST00000462125 EPS8L2Q9H6S3 715 aa12.49□□□□□ -0.41
C9orf3-210ENST00000462125 CAB39LQ9H9S4 337 aa12.49□□□□□ -0.41
C9orf3-210ENST00000462125 CLK4Q9HAZ1 481 aaKnown RBP12.49□□□□□ -0.41
C9orf3-210ENST00000462125 LRRC4CQ9HCJ2 640 aa12.49□□□□□ -0.41
C9orf3-210ENST00000462125 RIC8BQ9NVN3 520 aa12.49□□□□□ -0.41
C9orf3-210ENST00000462125 ASF1BQ9NVP2 202 aa12.49□□□□□ -0.41
C9orf3-210ENST00000462125 NAALAD2Q9Y3Q0 740 aa12.49□□□□□ -0.41
C9orf3-210ENST00000462125 PCDHGA10Q9Y5H3 936 aa12.49□□□□□ -0.41
C9orf3-210ENST00000462125 CSAG2Q9Y5P2 127 aa12.49□□□□□ -0.41
C9orf3-210ENST00000462125 SHANK1Q9Y566 2161 aa12.48□□□□□ -0.41
C9orf3-210ENST00000462125 NPEPPSL1A6NEC2 478 aa12.48□□□□□ -0.41
C9orf3-210ENST00000462125 NDUFS4O43181 175 aa12.48□□□□□ -0.41
C9orf3-210ENST00000462125 GALR3O60755 368 aaPredicted RBP12.48□□□□□ -0.41
C9orf3-210ENST00000462125 CBX6O95503 412 aa12.48□□□□□ -0.41
C9orf3-210ENST00000462125 C8orf89P0DMQ9 161 aa12.48□□□□□ -0.41
C9orf3-210ENST00000462125 ALOX12P18054 663 aa12.48□□□□□ -0.41
C9orf3-210ENST00000462125 SOX11P35716 441 aa12.48□□□□□ -0.41
C9orf3-210ENST00000462125 XCR1P46094 333 aa12.48□□□□□ -0.41
C9orf3-210ENST00000462125 AP2B1P63010 937 aa12.48□□□□□ -0.41
C9orf3-210ENST00000462125 REEP5Q00765 189 aa12.48□□□□□ -0.41
C9orf3-210ENST00000462125 USP10Q14694 798 aaKnown RBP12.48□□□□□ -0.41
C9orf3-210ENST00000462125 TGFBIQ15582 683 aa12.48□□□□□ -0.41
C9orf3-210ENST00000462125 ZKSCAN8Q15776 578 aaPredicted RBP12.48□□□□□ -0.41
C9orf3-210ENST00000462125 GRTP1Q5TC63 336 aa12.48□□□□□ -0.41
C9orf3-210ENST00000462125 FAAH2Q6GMR7 532 aa12.48□□□□□ -0.41
C9orf3-210ENST00000462125 NIPAL1Q6NVV3 410 aa12.48□□□□□ -0.41
C9orf3-210ENST00000462125 ANKRD53Q8N9V6 530 aa12.48□□□□□ -0.41
C9orf3-210ENST00000462125 TRPV3Q8NET8 790 aa12.48□□□□□ -0.41
C9orf3-210ENST00000462125 METTL21AQ8WXB1 218 aa12.48□□□□□ -0.41
C9orf3-210ENST00000462125 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.48□□□□□ -0.415e-7■■■■■ 77.3
C9orf3-210ENST00000462125 HAS2Q92819 552 aa12.48□□□□□ -0.41
C9orf3-210ENST00000462125 OR1F2PQ96R84 312 aa12.48□□□□□ -0.41
C9orf3-210ENST00000462125 EGFL8Q99944 293 aa12.48□□□□□ -0.41
C9orf3-210ENST00000462125 AIF1LQ9BQI0 150 aa12.48□□□□□ -0.41
C9orf3-210ENST00000462125 TUBB6Q9BUF5 446 aa12.48□□□□□ -0.41
C9orf3-210ENST00000462125 SLC6A16Q9GZN6 736 aa12.48□□□□□ -0.41
C9orf3-210ENST00000462125 ACBD3Q9H3P7 528 aa12.48□□□□□ -0.41
C9orf3-210ENST00000462125 TXNDC16Q9P2K2 825 aa12.48□□□□□ -0.41
C9orf3-210ENST00000462125 COPG2Q9UBF2 871 aa12.48□□□□□ -0.41
C9orf3-210ENST00000462125 DYRK1BQ9Y463 629 aa12.48□□□□□ -0.41
C9orf3-210ENST00000462125 COPG1Q9Y678 874 aaKnown RBP12.48□□□□□ -0.41
C9orf3-210ENST00000462125 PRRC2CQ9Y520 2896 aaKnown RBP12.48□□□□□ -0.41
C9orf3-210ENST00000462125 TAPBPO15533 448 aa12.47□□□□□ -0.41
C9orf3-210ENST00000462125 DNAJB6O75190 326 aa12.47□□□□□ -0.41
C9orf3-210ENST00000462125 RDH16O75452 317 aa12.47□□□□□ -0.41
C9orf3-210ENST00000462125 CCDC166P0CW27 439 aa12.47□□□□□ -0.41
C9orf3-210ENST00000462125 C1GALT1C1LP0DN25 315 aa12.47□□□□□ -0.41
C9orf3-210ENST00000462125 CD1DP15813 335 aa12.47□□□□□ -0.41
C9orf3-210ENST00000462125 STMN1P16949 149 aa12.47□□□□□ -0.41
C9orf3-210ENST00000462125 GNAZP19086 355 aa12.47□□□□□ -0.41
C9orf3-210ENST00000462125 TNFRSF8P28908 595 aa12.47□□□□□ -0.41
C9orf3-210ENST00000462125 SPRP35270 261 aaPredicted RBP12.47□□□□□ -0.41
C9orf3-210ENST00000462125 GDF5P43026 501 aa12.47□□□□□ -0.41
C9orf3-210ENST00000462125 TSFMP43897 325 aaKnown RBP12.47□□□□□ -0.41
C9orf3-210ENST00000462125 GLRBP48167 497 aa12.47□□□□□ -0.41
C9orf3-210ENST00000462125 AGTR2P50052 363 aa12.47□□□□□ -0.41
C9orf3-210ENST00000462125 ATP6V0D1P61421 351 aa12.47□□□□□ -0.41
C9orf3-210ENST00000462125 EEF1A2Q05639 463 aaKnown RBP12.47□□□□□ -0.41
C9orf3-210ENST00000462125 RGS1Q08116 209 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms