RNA–Protein interactions for RNA: ENST00000461550.5

MRPL28-207, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 5

Gene MRPL28, Length 1,478 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-207ENST00000461550 B3GALT4O96024 378 aa16.5■□□□□ 0.23
MRPL28-207ENST00000461550 NCF1P14598 390 aaPredicted RBP16.5■□□□□ 0.23
MRPL28-207ENST00000461550 CXCR2P25025 360 aa16.5■□□□□ 0.23
MRPL28-207ENST00000461550 XCR1P46094 333 aa16.5■□□□□ 0.23
MRPL28-207ENST00000461550 POU4F1Q01851 419 aa16.5■□□□□ 0.23
MRPL28-207ENST00000461550 USP10Q14694 798 aaKnown RBP16.5■□□□□ 0.23
MRPL28-207ENST00000461550 EFTUD2Q15029 972 aaKnown RBP eCLIP16.5■□□□□ 0.234e-6■■□□□ 11.5
MRPL28-207ENST00000461550 MINDY4Q4G0A6 757 aa16.5■□□□□ 0.23
MRPL28-207ENST00000461550 NDUFAF7Q7L592 441 aa16.5■□□□□ 0.23
MRPL28-207ENST00000461550 TMPRSS11BQ86T26 416 aa16.5■□□□□ 0.23
MRPL28-207ENST00000461550 CUZD1Q86UP6 607 aa16.5■□□□□ 0.23
MRPL28-207ENST00000461550 CTAGE3PQ8IX95 158 aa16.5■□□□□ 0.23
MRPL28-207ENST00000461550 CISD2Q8N5K1 135 aaKnown RBP16.5■□□□□ 0.23
MRPL28-207ENST00000461550 TM9SF4Q92544 642 aa16.5■□□□□ 0.23
MRPL28-207ENST00000461550 RBBP8Q99708 897 aa16.5■□□□□ 0.23
MRPL28-207ENST00000461550 CPNE1Q99829 537 aa16.5■□□□□ 0.23
MRPL28-207ENST00000461550 VN1R1Q9GZP7 353 aa16.5■□□□□ 0.23
MRPL28-207ENST00000461550 ANKZF1Q9H8Y5 726 aa16.5■□□□□ 0.23
MRPL28-207ENST00000461550 NAALAD2Q9Y3Q0 740 aa16.5■□□□□ 0.23
MRPL28-207ENST00000461550 DYRK1BQ9Y463 629 aa16.5■□□□□ 0.23
MRPL28-207ENST00000461550 SPTAN1Q13813 2472 aaKnown RBP16.5■□□□□ 0.23
MRPL28-207ENST00000461550 USP9YO00507 2555 aaPredicted RBP16.5■□□□□ 0.23
MRPL28-207ENST00000461550 IGHV3-20A0A0C4DH32 117 aa16.49■□□□□ 0.23
MRPL28-207ENST00000461550 TRBC2A0A5B9 178 aa16.49■□□□□ 0.23
MRPL28-207ENST00000461550 WISP3O95389 354 aaPredicted RBP16.49■□□□□ 0.23
MRPL28-207ENST00000461550 GDF5P43026 501 aa16.49■□□□□ 0.23
MRPL28-207ENST00000461550 UBAP2LQ14157 1087 aaKnown RBP16.49■□□□□ 0.23
MRPL28-207ENST00000461550 KBTBD12Q3ZCT8 623 aa16.49■□□□□ 0.23
MRPL28-207ENST00000461550 FBXO48Q5FWF7 155 aa16.49■□□□□ 0.23
MRPL28-207ENST00000461550 UBAP2Q5T6F2 1119 aaKnown RBP16.49■□□□□ 0.23
MRPL28-207ENST00000461550 LANCL3Q6ZV70 420 aa16.49■□□□□ 0.23
MRPL28-207ENST00000461550 ADAMTSL2Q86TH1 951 aa16.49■□□□□ 0.23
MRPL28-207ENST00000461550 IQCKQ8N0W5 287 aa16.49■□□□□ 0.23
MRPL28-207ENST00000461550 SIRT6Q8N6T7 355 aa16.49■□□□□ 0.23
MRPL28-207ENST00000461550 PPM1NQ8N819 430 aa16.49■□□□□ 0.23
MRPL28-207ENST00000461550 GALNT11Q8NCW6 608 aa16.49■□□□□ 0.23
MRPL28-207ENST00000461550 OR5T3Q8NGG3 340 aa16.49■□□□□ 0.23
MRPL28-207ENST00000461550 ANKRD7Q92527 254 aa16.49■□□□□ 0.23
MRPL28-207ENST00000461550 SNRNP40Q96DI7 357 aaKnown RBP16.49■□□□□ 0.23
MRPL28-207ENST00000461550 CNDP1Q96KN2 507 aa16.49■□□□□ 0.23
MRPL28-207ENST00000461550 GPR22Q99680 433 aa16.49■□□□□ 0.23
MRPL28-207ENST00000461550 POPDC3Q9HBV1 291 aa16.49■□□□□ 0.23
MRPL28-207ENST00000461550 ASF1BQ9NVP2 202 aa16.49■□□□□ 0.23
MRPL28-207ENST00000461550 NINJ2Q9NZG7 142 aa16.49■□□□□ 0.23
MRPL28-207ENST00000461550 TCP11X1B4DZS4 312 aa16.48■□□□□ 0.23
MRPL28-207ENST00000461550 DNAJB6O75190 326 aa16.48■□□□□ 0.23
MRPL28-207ENST00000461550 CDC123O75794 336 aaPredicted RBP16.48■□□□□ 0.23
MRPL28-207ENST00000461550 WDR47O94967 919 aa16.48■□□□□ 0.23
MRPL28-207ENST00000461550 FAM153BP0C7A2 387 aa16.48■□□□□ 0.23
MRPL28-207ENST00000461550 PRR35P0CG20 571 aa16.48■□□□□ 0.23
MRPL28-207ENST00000461550 CCDC166P0CW27 439 aa16.48■□□□□ 0.23
MRPL28-207ENST00000461550 C8orf89P0DMQ9 161 aa16.48■□□□□ 0.23
MRPL28-207ENST00000461550 VARSP26640 1264 aaKnown RBP16.48■□□□□ 0.23
MRPL28-207ENST00000461550 GP5P40197 560 aa16.48■□□□□ 0.23
MRPL28-207ENST00000461550 OLR1P78380 273 aa16.48■□□□□ 0.23
MRPL28-207ENST00000461550 CDKL1Q00532 357 aa16.48■□□□□ 0.23
MRPL28-207ENST00000461550 REEP5Q00765 189 aa16.48■□□□□ 0.23
MRPL28-207ENST00000461550 PCOLCEQ15113 449 aa16.48■□□□□ 0.23
MRPL28-207ENST00000461550 ERCC6LQ2NKX8 1250 aa16.48■□□□□ 0.23
MRPL28-207ENST00000461550 FAM153CQ494X1 144 aa16.48■□□□□ 0.23
MRPL28-207ENST00000461550 Q6ZS92 163 aa16.48■□□□□ 0.23
MRPL28-207ENST00000461550 CEP128Q6ZU80 1094 aa16.48■□□□□ 0.23
MRPL28-207ENST00000461550 KBTBD2Q8IY47 623 aa16.48■□□□□ 0.23
MRPL28-207ENST00000461550 ANKRD53Q8N9V6 530 aa16.48■□□□□ 0.23
MRPL28-207ENST00000461550 BRIX1Q8TDN6 353 aaKnown RBP16.48■□□□□ 0.23
MRPL28-207ENST00000461550 FBF1Q8TES7 1133 aa16.48■□□□□ 0.23
MRPL28-207ENST00000461550 TSPAN17Q96FV3 270 aa16.48■□□□□ 0.23
MRPL28-207ENST00000461550 WDR77Q9BQA1 342 aaPredicted RBP16.48■□□□□ 0.23
MRPL28-207ENST00000461550 DERL2Q9GZP9 239 aa16.48■□□□□ 0.23
MRPL28-207ENST00000461550 PTGFRNQ9P2B2 879 aa16.48■□□□□ 0.23
MRPL28-207ENST00000461550 LOC102723996A0A087X1L8 192 aa16.48■□□□□ 0.23
MRPL28-207ENST00000461550 SEC24DO94855 1032 aaPredicted RBP16.48■□□□□ 0.23
MRPL28-207ENST00000461550 GSTA2P09210 222 aa16.48■□□□□ 0.23
MRPL28-207ENST00000461550 ZNF888P0CJ79 500 aaPredicted RBP16.48■□□□□ 0.23
MRPL28-207ENST00000461550 MYBL2P10244 700 aa16.48■□□□□ 0.23
MRPL28-207ENST00000461550 STMN1P16949 149 aa16.48■□□□□ 0.23
MRPL28-207ENST00000461550 HNF4AP41235 474 aa16.48■□□□□ 0.23
MRPL28-207ENST00000461550 SCTRP47872 440 aa16.48■□□□□ 0.23
MRPL28-207ENST00000461550 GLRBP48167 497 aa16.48■□□□□ 0.23
MRPL28-207ENST00000461550 MRPL49Q13405 166 aaKnown RBP16.48■□□□□ 0.23
MRPL28-207ENST00000461550 NAA30Q147X3 362 aaPredicted RBP16.48■□□□□ 0.23
MRPL28-207ENST00000461550 RBBP5Q15291 538 aaKnown RBP16.48■□□□□ 0.23
MRPL28-207ENST00000461550 OR4D1Q15615 310 aa16.48■□□□□ 0.23
MRPL28-207ENST00000461550 DEFB134Q4QY38 66 aa16.48■□□□□ 0.23
MRPL28-207ENST00000461550 TMEM205Q6UW68 189 aa16.48■□□□□ 0.23
MRPL28-207ENST00000461550 NXPE4Q6UWF7 544 aa16.48■□□□□ 0.23
MRPL28-207ENST00000461550 IGFL2Q6UWQ7 119 aa16.48■□□□□ 0.23
MRPL28-207ENST00000461550 ISLR2Q6UXK2 745 aa16.48■□□□□ 0.23
MRPL28-207ENST00000461550 TBC1D19Q8N5T2 526 aa16.48■□□□□ 0.23
MRPL28-207ENST00000461550 PSMF1Q92530 271 aa16.48■□□□□ 0.23
MRPL28-207ENST00000461550 RHBDF1Q96CC6 855 aa16.48■□□□□ 0.23
MRPL28-207ENST00000461550 PEX11GQ96HA9 241 aa16.48■□□□□ 0.23
MRPL28-207ENST00000461550 SARGQ9BW04 601 aa16.48■□□□□ 0.23
MRPL28-207ENST00000461550 TSPYL1Q9H0U9 437 aa16.48■□□□□ 0.23
MRPL28-207ENST00000461550 CDC42EP4Q9H3Q1 356 aaKnown RBP16.48■□□□□ 0.23
MRPL28-207ENST00000461550 EPS8L2Q9H6S3 715 aa16.48■□□□□ 0.23
MRPL28-207ENST00000461550 PELI2Q9HAT8 420 aa16.48■□□□□ 0.23
MRPL28-207ENST00000461550 RIC8BQ9NVN3 520 aa16.48■□□□□ 0.23
MRPL28-207ENST00000461550 ZFP69BQ9UJL9 534 aa16.48■□□□□ 0.23
MRPL28-207ENST00000461550 NTNG1Q9Y2I2 539 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms