RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 CEP250Q9BV73 2442 aa13.98□□□□□ -0.17
TNF-208ENST00000449264 MRPL1Q9BYD6 325 aaKnown RBP13.98□□□□□ -0.17
TNF-208ENST00000449264 IRAK4Q9NWZ3 460 aa13.98□□□□□ -0.17
TNF-208ENST00000449264 HEY2Q9UBP5 337 aa13.98□□□□□ -0.17
TNF-208ENST00000449264 VPS29Q9UBQ0 182 aa13.98□□□□□ -0.17
TNF-208ENST00000449264 SERTM1A2A2V5 107 aa13.97□□□□□ -0.17
TNF-208ENST00000449264 NTN3O00634 580 aaPredicted RBP13.97□□□□□ -0.17
TNF-208ENST00000449264 SEC22BO75396 215 aa13.97□□□□□ -0.17
TNF-208ENST00000449264 RFPL3O75679 317 aa13.97□□□□□ -0.17
TNF-208ENST00000449264 TBX6O95947 436 aaPredicted RBP13.97□□□□□ -0.17
TNF-208ENST00000449264 SLC35G6P0C7Q6 338 aa13.97□□□□□ -0.17
TNF-208ENST00000449264 LBPP18428 481 aa13.97□□□□□ -0.17
TNF-208ENST00000449264 NCF2P19878 526 aaPredicted RBP13.97□□□□□ -0.17
TNF-208ENST00000449264 GSTM2P28161 218 aa13.97□□□□□ -0.17
TNF-208ENST00000449264 HNRNPH1P31943 449 aaKnown RBP13.97□□□□□ -0.17
TNF-208ENST00000449264 RAP1GDS1P52306 607 aa13.97□□□□□ -0.17
TNF-208ENST00000449264 ZC3H12BQ5HYM0 836 aaKnown RBP13.97□□□□□ -0.17
TNF-208ENST00000449264 C6orf136Q5SQH8 315 aa13.97□□□□□ -0.17
TNF-208ENST00000449264 DGLUCYQ7Z3D6 616 aa13.97□□□□□ -0.17
TNF-208ENST00000449264 PIP4P1Q86T03 277 aa13.97□□□□□ -0.17
TNF-208ENST00000449264 KIAA2013Q8IYS2 634 aa13.97□□□□□ -0.17
TNF-208ENST00000449264 F2RL3Q96RI0 385 aa13.97□□□□□ -0.17
TNF-208ENST00000449264 SERPINI1Q99574 410 aa13.97□□□□□ -0.17
TNF-208ENST00000449264 ZNF768Q9H5H4 540 aaKnown RBP13.97□□□□□ -0.17
TNF-208ENST00000449264 C1orf109Q9NX04 203 aa13.97□□□□□ -0.17
TNF-208ENST00000449264 POLR3HQ9Y535 204 aaPredicted RBP13.97□□□□□ -0.17
TNF-208ENST00000449264 CNOT1A5YKK6 2376 aaKnown RBP13.96□□□□□ -0.17
TNF-208ENST00000449264 SCN3AQ9NY46 2000 aa13.96□□□□□ -0.17
TNF-208ENST00000449264 PRR35P0CG20 571 aa13.96□□□□□ -0.17
TNF-208ENST00000449264 PTX3P26022 381 aaPredicted RBP13.96□□□□□ -0.17
TNF-208ENST00000449264 RELAQ04206 551 aa13.96□□□□□ -0.17
TNF-208ENST00000449264 RGS1Q08116 209 aa13.96□□□□□ -0.17
TNF-208ENST00000449264 ACSM2AQ08AH3 577 aa13.96□□□□□ -0.17
TNF-208ENST00000449264 CLPPQ16740 277 aaPredicted RBP13.96□□□□□ -0.17
TNF-208ENST00000449264 HKDC1Q2TB90 917 aa13.96□□□□□ -0.17
TNF-208ENST00000449264 TOR1AIP1Q5JTV8 583 aa13.96□□□□□ -0.17
TNF-208ENST00000449264 KHDRBS2Q5VWX1 349 aaKnown RBP13.96□□□□□ -0.17
TNF-208ENST00000449264 ACSM2BQ68CK6 577 aa13.96□□□□□ -0.17
TNF-208ENST00000449264 B3GNT8Q7Z7M8 397 aa13.96□□□□□ -0.17
TNF-208ENST00000449264 MCATQ8IVS2 390 aaKnown RBP13.96□□□□□ -0.17
TNF-208ENST00000449264 DNAJC22Q8N4W6 341 aa13.96□□□□□ -0.17
TNF-208ENST00000449264 CSNK1A1LQ8N752 337 aa13.96□□□□□ -0.17
TNF-208ENST00000449264 ZCCHC10Q8TBK6 192 aa13.96□□□□□ -0.17
TNF-208ENST00000449264 STON2Q8WXE9 905 aa13.96□□□□□ -0.17
TNF-208ENST00000449264 THAP11Q96EK4 314 aa13.96□□□□□ -0.17
TNF-208ENST00000449264 CENPKQ9BS16 269 aa13.96□□□□□ -0.17
TNF-208ENST00000449264 EBPLQ9BY08 206 aa13.96□□□□□ -0.17
TNF-208ENST00000449264 REXO4Q9GZR2 422 aaKnown RBP13.96□□□□□ -0.17
TNF-208ENST00000449264 KLHL31Q9H511 634 aa13.96□□□□□ -0.17
TNF-208ENST00000449264 STARD5Q9NSY2 213 aa13.96□□□□□ -0.17
TNF-208ENST00000449264 NMRK1Q9NWW6 199 aa13.96□□□□□ -0.17
TNF-208ENST00000449264 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.96□□□□□ -0.17
TNF-208ENST00000449264 TRIM33Q9UPN9 1127 aa13.96□□□□□ -0.17
TNF-208ENST00000449264 COL27A1Q8IZC6 1860 aaPredicted RBP13.96□□□□□ -0.17
TNF-208ENST00000449264 A0A0G2JN53 185 aa13.95□□□□□ -0.18
TNF-208ENST00000449264 UBDO15205 165 aa13.95□□□□□ -0.18
TNF-208ENST00000449264 TOX3O15405 576 aaPredicted RBP13.95□□□□□ -0.18
TNF-208ENST00000449264 CTSBP07858 339 aa13.95□□□□□ -0.18
TNF-208ENST00000449264 SERPINA6P08185 405 aa13.95□□□□□ -0.18
TNF-208ENST00000449264 ALDOCP09972 364 aaKnown RBP13.95□□□□□ -0.18
TNF-208ENST00000449264 NELFEP18615 380 aaKnown RBP13.95□□□□□ -0.18
TNF-208ENST00000449264 PLA2G16P53816 162 aa13.95□□□□□ -0.18
TNF-208ENST00000449264 ERVK-8P63133 956 aa13.95□□□□□ -0.18
TNF-208ENST00000449264 TRIP6Q15654 476 aaKnown RBP13.95□□□□□ -0.18
TNF-208ENST00000449264 GPR19Q15760 415 aa13.95□□□□□ -0.18
TNF-208ENST00000449264 RFTN2Q52LD8 501 aaPredicted RBP13.95□□□□□ -0.18
TNF-208ENST00000449264 TMTC4Q5T4D3 741 aa13.95□□□□□ -0.18
TNF-208ENST00000449264 CHSY3Q70JA7 882 aa13.95□□□□□ -0.18
TNF-208ENST00000449264 MTDHQ86UE4 582 aaKnown RBP13.95□□□□□ -0.18
TNF-208ENST00000449264 ZFAND4Q86XD8 727 aa13.95□□□□□ -0.18
TNF-208ENST00000449264 KMT5CQ86Y97 462 aa13.95□□□□□ -0.18
TNF-208ENST00000449264 SLITRK4Q8IW52 837 aa13.95□□□□□ -0.18
TNF-208ENST00000449264 C1orf52Q8N6N3 182 aaKnown RBP13.95□□□□□ -0.18
TNF-208ENST00000449264 ZNF655Q8N720 491 aaPredicted RBP13.95□□□□□ -0.18
TNF-208ENST00000449264 KCT2Q8NC54 265 aa13.95□□□□□ -0.18
TNF-208ENST00000449264 CAMKVQ8NCB2 501 aa13.95□□□□□ -0.18
TNF-208ENST00000449264 WDR48Q8TAF3 677 aa13.95□□□□□ -0.18
TNF-208ENST00000449264 KLHL6Q8WZ60 621 aa13.95□□□□□ -0.18
TNF-208ENST00000449264 SLC41A2Q96JW4 573 aa13.95□□□□□ -0.18
TNF-208ENST00000449264 SORBS1Q9BX66 1292 aaKnown RBP13.95□□□□□ -0.18
TNF-208ENST00000449264 AICDAQ9GZX7 198 aa13.95□□□□□ -0.18
TNF-208ENST00000449264 SEMA5BQ9P283 1151 aa13.95□□□□□ -0.18
TNF-208ENST00000449264 PPT2Q9UMR5 302 aa13.95□□□□□ -0.18
TNF-208ENST00000449264 PLCL2Q9UPR0 1127 aa13.95□□□□□ -0.18
TNF-208ENST00000449264 KIF26BQ2KJY2 2108 aa13.95□□□□□ -0.18
TNF-208ENST00000449264 LRIT2A6NDA9 550 aa13.95□□□□□ -0.18
TNF-208ENST00000449264 TMEM150CB9EJG8 249 aa13.95□□□□□ -0.18
TNF-208ENST00000449264 RTCAO00442 366 aaKnown RBP13.95□□□□□ -0.18
TNF-208ENST00000449264 PLPP1O14494 284 aa13.95□□□□□ -0.18
TNF-208ENST00000449264 ERI3O43414 337 aaKnown RBP13.95□□□□□ -0.18
TNF-208ENST00000449264 GFRA3O60609 400 aa13.95□□□□□ -0.18
TNF-208ENST00000449264 ANKRD34CP0C6C1 535 aa13.95□□□□□ -0.18
TNF-208ENST00000449264 PRPH2P23942 346 aa13.95□□□□□ -0.18
TNF-208ENST00000449264 LIMK1P53667 647 aa13.95□□□□□ -0.18
TNF-208ENST00000449264 DIO3P55073 304 aa13.95□□□□□ -0.18
TNF-208ENST00000449264 STXBP1P61764 594 aaKnown RBP13.95□□□□□ -0.18
TNF-208ENST00000449264 TBL3Q12788 808 aaKnown RBP13.95□□□□□ -0.18
TNF-208ENST00000449264 HYAL2Q12891 473 aa13.95□□□□□ -0.18
TNF-208ENST00000449264 PWP1Q13610 501 aa13.95□□□□□ -0.18
TNF-208ENST00000449264 CUL3Q13618 768 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms