RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 RBBP7Q16576 425 aa14.06□□□□□ -0.16
HDAC4-204ENST00000446876 XKR6Q5GH73 641 aa14.06□□□□□ -0.16
HDAC4-204ENST00000446876 ATG9BQ674R7 924 aa14.06□□□□□ -0.16
HDAC4-204ENST00000446876 KLC3Q6P597 504 aa14.06□□□□□ -0.16
HDAC4-204ENST00000446876 LRRC70Q7Z2Q7 622 aa14.06□□□□□ -0.16
HDAC4-204ENST00000446876 PTRH1Q86Y79 214 aaKnown RBP14.06□□□□□ -0.16
HDAC4-204ENST00000446876 RHEBL1Q8TAI7 183 aa14.06□□□□□ -0.16
HDAC4-204ENST00000446876 NT5CQ8TCD5 201 aa14.06□□□□□ -0.16
HDAC4-204ENST00000446876 UBTD2Q8WUN7 234 aa14.06□□□□□ -0.16
HDAC4-204ENST00000446876 SCYL1Q96KG9 808 aa14.06□□□□□ -0.16
HDAC4-204ENST00000446876 RBCK1Q9BYM8 510 aa14.06□□□□□ -0.16
HDAC4-204ENST00000446876 AICDAQ9GZX7 198 aa14.06□□□□□ -0.16
HDAC4-204ENST00000446876 KLHL31Q9H511 634 aa14.06□□□□□ -0.16
HDAC4-204ENST00000446876 ANKHQ9HCJ1 492 aa14.06□□□□□ -0.16
HDAC4-204ENST00000446876 GPRC5BQ9NZH0 403 aa14.06□□□□□ -0.16
HDAC4-204ENST00000446876 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.06□□□□□ -0.16
HDAC4-204ENST00000446876 TUBD1Q9UJT1 453 aa14.06□□□□□ -0.16
HDAC4-204ENST00000446876 C3orf18Q9UK00 162 aa14.06□□□□□ -0.16
HDAC4-204ENST00000446876 FBXL4Q9UKA2 621 aa14.06□□□□□ -0.16
HDAC4-204ENST00000446876 NAALAD2Q9Y3Q0 740 aa14.06□□□□□ -0.16
HDAC4-204ENST00000446876 MAP4K5Q9Y4K4 846 aa14.06□□□□□ -0.16
HDAC4-204ENST00000446876 HS3ST3B1Q9Y662 390 aa14.06□□□□□ -0.16
HDAC4-204ENST00000446876 V9GYY5 206 aaPredicted RBP14.06□□□□□ -0.16
HDAC4-204ENST00000446876 KALRNO60229 2985 aa14.06□□□□□ -0.16
HDAC4-204ENST00000446876 BOD1L1Q8NFC6 3051 aa14.06□□□□□ -0.16
HDAC4-204ENST00000446876 SYCE1LA8MT33 242 aa14.05□□□□□ -0.16
HDAC4-204ENST00000446876 MKRN2OSH3BPM6 223 aa14.05□□□□□ -0.16
HDAC4-204ENST00000446876 PEX12O00623 359 aa14.05□□□□□ -0.16
HDAC4-204ENST00000446876 DNAJB6O75190 326 aa14.05□□□□□ -0.16
HDAC4-204ENST00000446876 H2AFYO75367 372 aaKnown RBP14.05□□□□□ -0.16
HDAC4-204ENST00000446876 SHBGP04278 402 aa14.05□□□□□ -0.16
HDAC4-204ENST00000446876 SNRPAP09012 282 aaKnown RBP14.05□□□□□ -0.16
HDAC4-204ENST00000446876 SFTPCP11686 197 aa14.05□□□□□ -0.16
HDAC4-204ENST00000446876 GFAPP14136 432 aa14.05□□□□□ -0.16
HDAC4-204ENST00000446876 CNTFP26441 200 aa14.05□□□□□ -0.16
HDAC4-204ENST00000446876 AHRP35869 848 aa14.05□□□□□ -0.16
HDAC4-204ENST00000446876 OLR1P78380 273 aa14.05□□□□□ -0.16
HDAC4-204ENST00000446876 RGS1Q08116 209 aa14.05□□□□□ -0.16
HDAC4-204ENST00000446876 C19orf57Q0VDD7 668 aa14.05□□□□□ -0.16
HDAC4-204ENST00000446876 CHIT1Q13231 466 aa14.05□□□□□ -0.16
HDAC4-204ENST00000446876 PWP1Q13610 501 aa14.05□□□□□ -0.16
HDAC4-204ENST00000446876 DOC2AQ14183 400 aa14.05□□□□□ -0.16
HDAC4-204ENST00000446876 PFKFB4Q16877 469 aa14.05□□□□□ -0.16
HDAC4-204ENST00000446876 DEFB134Q4QY38 66 aa14.05□□□□□ -0.16
HDAC4-204ENST00000446876 LACTB2Q53H82 288 aaPredicted RBP14.05□□□□□ -0.16
HDAC4-204ENST00000446876 TOR1AIP1Q5JTV8 583 aa14.05□□□□□ -0.16
HDAC4-204ENST00000446876 FAAH2Q6GMR7 532 aa14.05□□□□□ -0.16
HDAC4-204ENST00000446876 ADGRD1Q6QNK2 874 aa14.05□□□□□ -0.16
HDAC4-204ENST00000446876 KIRREL2Q6UWL6 708 aa14.05□□□□□ -0.16
HDAC4-204ENST00000446876 EIF1ADQ8N9N8 165 aaKnown RBP14.05□□□□□ -0.16
HDAC4-204ENST00000446876 OR5T3Q8NGG3 340 aa14.05□□□□□ -0.16
HDAC4-204ENST00000446876 CREB3L4Q8TEY5 395 aa14.05□□□□□ -0.16
HDAC4-204ENST00000446876 UBLCP1Q8WVY7 318 aaPredicted RBP14.05□□□□□ -0.16
HDAC4-204ENST00000446876 CCT6BQ92526 530 aa14.05□□□□□ -0.16
HDAC4-204ENST00000446876 C8orf44Q96CB5 159 aa14.05□□□□□ -0.16
HDAC4-204ENST00000446876 MKKSQ9NPJ1 570 aaPredicted RBP14.05□□□□□ -0.16
HDAC4-204ENST00000446876 XPR1Q9UBH6 696 aa14.05□□□□□ -0.16
HDAC4-204ENST00000446876 OPTCQ9UBM4 332 aa14.05□□□□□ -0.16
HDAC4-204ENST00000446876 TLN1Q9Y490 2541 aaKnown RBP14.05□□□□□ -0.16
HDAC4-204ENST00000446876 DOCK10Q96BY6 2186 aa14.05□□□□□ -0.16
HDAC4-204ENST00000446876 OR2W5A6NFC9 320 aa14.04□□□□□ -0.16
HDAC4-204ENST00000446876 FOXO6A8MYZ6 492 aa14.04□□□□□ -0.16
HDAC4-204ENST00000446876 IDSB3KWA1 339 aa14.04□□□□□ -0.16
HDAC4-204ENST00000446876 H0YIG0 161 aa14.04□□□□□ -0.16
HDAC4-204ENST00000446876 K7EPI3 171 aa14.04□□□□□ -0.16
HDAC4-204ENST00000446876 AGPSO00116 658 aa14.04□□□□□ -0.16
HDAC4-204ENST00000446876 SIX3O95343 332 aaPredicted RBP14.04□□□□□ -0.16
HDAC4-204ENST00000446876 ALOX12P18054 663 aa14.04□□□□□ -0.16
HDAC4-204ENST00000446876 XCR1P46094 333 aa14.04□□□□□ -0.16
HDAC4-204ENST00000446876 RRADP55042 308 aa14.04□□□□□ -0.16
HDAC4-204ENST00000446876 RAB8AP61006 207 aa14.04□□□□□ -0.16
HDAC4-204ENST00000446876 VSNL1P62760 191 aa14.04□□□□□ -0.16
HDAC4-204ENST00000446876 IRF8Q02556 426 aa14.04□□□□□ -0.16
HDAC4-204ENST00000446876 SETDB1Q15047 1291 aa14.04□□□□□ -0.16
HDAC4-204ENST00000446876 DCAF10Q5QP82 559 aa14.04□□□□□ -0.16
HDAC4-204ENST00000446876 TMIGD1Q6UXZ0 262 aa14.04□□□□□ -0.16
HDAC4-204ENST00000446876 MED25Q71SY5 747 aa14.04□□□□□ -0.16
HDAC4-204ENST00000446876 VN1R5Q7Z5H4 357 aa14.04□□□□□ -0.16
HDAC4-204ENST00000446876 KRT78Q8N1N4 520 aa14.04□□□□□ -0.16
HDAC4-204ENST00000446876 AFAP1L2Q8N4X5 818 aa14.04□□□□□ -0.16
HDAC4-204ENST00000446876 TEX9Q8N6V9 391 aa14.04□□□□□ -0.16
HDAC4-204ENST00000446876 AMER2Q8N7J2 671 aa14.04□□□□□ -0.16
HDAC4-204ENST00000446876 TMEM102Q8N9M5 508 aaPredicted RBP14.04□□□□□ -0.16
HDAC4-204ENST00000446876 FDCSPQ8NFU4 85 aa14.04□□□□□ -0.16
HDAC4-204ENST00000446876 OR51Q1Q8NH59 317 aa14.04□□□□□ -0.16
HDAC4-204ENST00000446876 UTP15Q8TED0 518 aaKnown RBP14.04□□□□□ -0.16
HDAC4-204ENST00000446876 IP6K3Q96PC2 410 aa14.04□□□□□ -0.16
HDAC4-204ENST00000446876 SLC25A23Q9BV35 468 aa14.04□□□□□ -0.16
HDAC4-204ENST00000446876 NUDT9Q9BW91 350 aa14.04□□□□□ -0.16
HDAC4-204ENST00000446876 CAPS2Q9BXY5 557 aa14.04□□□□□ -0.16
HDAC4-204ENST00000446876 SLC6A16Q9GZN6 736 aa14.04□□□□□ -0.16
HDAC4-204ENST00000446876 SEMA3GQ9NS98 782 aa14.04□□□□□ -0.16
HDAC4-204ENST00000446876 C14orf105Q9NVL8 296 aa14.04□□□□□ -0.16
HDAC4-204ENST00000446876 TBK1Q9UHD2 729 aa14.04□□□□□ -0.16
HDAC4-204ENST00000446876 SLC22A7Q9Y694 548 aa14.04□□□□□ -0.16
HDAC4-204ENST00000446876 A0A0G2JN53 185 aa14.03□□□□□ -0.16
HDAC4-204ENST00000446876 GOLGA8RI6L899 631 aa14.03□□□□□ -0.16
HDAC4-204ENST00000446876 KLK8O60259 260 aa14.03□□□□□ -0.16
HDAC4-204ENST00000446876 GALR3O60755 368 aaPredicted RBP14.03□□□□□ -0.16
HDAC4-204ENST00000446876 CEACAM4O75871 244 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms