RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 AFAP1L2Q8N4X5 818 aa10.27□□□□□ -0.77
SF3A1-203ENST00000444440 CAMKVQ8NCB2 501 aa10.27□□□□□ -0.77
SF3A1-203ENST00000444440 PPP4R1Q8TF05 950 aa10.27□□□□□ -0.77
SF3A1-203ENST00000444440 SLC5A11Q8WWX8 675 aa10.27□□□□□ -0.77
SF3A1-203ENST00000444440 THAP11Q96EK4 314 aa10.27□□□□□ -0.77
SF3A1-203ENST00000444440 HIST1H2AHQ96KK5 128 aa10.27□□□□□ -0.77
SF3A1-203ENST00000444440 IMMP1LQ96LU5 166 aa10.27□□□□□ -0.77
SF3A1-203ENST00000444440 AGAP4Q96P64 663 aa10.27□□□□□ -0.77
SF3A1-203ENST00000444440 BARD1Q99728 777 aaKnown RBP10.27□□□□□ -0.77
SF3A1-203ENST00000444440 HIST1H2AJQ99878 128 aa10.27□□□□□ -0.77
SF3A1-203ENST00000444440 TMEM79Q9BSE2 394 aa10.27□□□□□ -0.77
SF3A1-203ENST00000444440 HAUS8Q9BT25 410 aa10.27□□□□□ -0.77
SF3A1-203ENST00000444440 H2AFJQ9BTM1 129 aa10.27□□□□□ -0.77
SF3A1-203ENST00000444440 ILKAPQ9H0C8 392 aaPredicted RBP10.27□□□□□ -0.77
SF3A1-203ENST00000444440 ZNF700Q9H0M5 742 aa10.27□□□□□ -0.77
SF3A1-203ENST00000444440 KLHL31Q9H511 634 aa10.27□□□□□ -0.77
SF3A1-203ENST00000444440 LANCL2Q9NS86 450 aa10.27□□□□□ -0.77
SF3A1-203ENST00000444440 PLA2G3Q9NZ20 509 aa10.27□□□□□ -0.77
SF3A1-203ENST00000444440 PTGFRNQ9P2B2 879 aa10.27□□□□□ -0.77
SF3A1-203ENST00000444440 SLC22A14Q9Y267 594 aa10.27□□□□□ -0.77
SF3A1-203ENST00000444440 OARD1Q9Y530 152 aa10.27□□□□□ -0.77
SF3A1-203ENST00000444440 SPTBN1Q01082 2364 aaKnown RBP10.27□□□□□ -0.77
SF3A1-203ENST00000444440 ESYT3A0FGR9 886 aa10.26□□□□□ -0.77
SF3A1-203ENST00000444440 BLACEA4D250 179 aa10.26□□□□□ -0.77
SF3A1-203ENST00000444440 NCF1BA6NI72 391 aaPredicted RBP10.26□□□□□ -0.77
SF3A1-203ENST00000444440 NCF1CA8MVU1 366 aaPredicted RBP10.26□□□□□ -0.77
SF3A1-203ENST00000444440 E2F3O00716 465 aa10.26□□□□□ -0.77
SF3A1-203ENST00000444440 TAPBPO15533 448 aa10.26□□□□□ -0.77
SF3A1-203ENST00000444440 PRPF4O43172 522 aaKnown RBP eCLIP10.26□□□□□ -0.77
SF3A1-203ENST00000444440 NDUFS4O43181 175 aa10.26□□□□□ -0.77
SF3A1-203ENST00000444440 CDC123O75794 336 aaPredicted RBP10.26□□□□□ -0.77
SF3A1-203ENST00000444440 IPO13O94829 963 aaKnown RBP10.26□□□□□ -0.77
SF3A1-203ENST00000444440 CBX6O95503 412 aa10.26□□□□□ -0.77
SF3A1-203ENST00000444440 TBX6O95947 436 aaPredicted RBP10.26□□□□□ -0.77
SF3A1-203ENST00000444440 ZNF888P0CJ79 500 aaPredicted RBP10.26□□□□□ -0.77
SF3A1-203ENST00000444440 NCF1P14598 390 aaPredicted RBP10.26□□□□□ -0.77
SF3A1-203ENST00000444440 SCTRP47872 440 aa10.26□□□□□ -0.77
SF3A1-203ENST00000444440 SLC6A12P48065 614 aa10.26□□□□□ -0.77
SF3A1-203ENST00000444440 CCR8P51685 355 aa10.26□□□□□ -0.77
SF3A1-203ENST00000444440 SLC7A5Q01650 507 aa10.26□□□□□ -0.77
SF3A1-203ENST00000444440 RHAGQ02094 409 aa10.26□□□□□ -0.77
SF3A1-203ENST00000444440 SRSF11Q05519 484 aaKnown RBP10.26□□□□□ -0.77
SF3A1-203ENST00000444440 DLG1Q12959 904 aa10.26□□□□□ -0.77
SF3A1-203ENST00000444440 MFAP5Q13361 173 aa10.26□□□□□ -0.77
SF3A1-203ENST00000444440 ADNP2Q6IQ32 1131 aa10.26□□□□□ -0.77
SF3A1-203ENST00000444440 C8orf74Q6P047 294 aa10.26□□□□□ -0.77
SF3A1-203ENST00000444440 ISLR2Q6UXK2 745 aa10.26□□□□□ -0.77
SF3A1-203ENST00000444440 ANKRD37Q7Z713 158 aa10.26□□□□□ -0.77
SF3A1-203ENST00000444440 KBTBD2Q8IY47 623 aa10.26□□□□□ -0.77
SF3A1-203ENST00000444440 NKAPQ8N5F7 415 aaKnown RBP10.26□□□□□ -0.77
SF3A1-203ENST00000444440 DNAJB14Q8TBM8 379 aa10.26□□□□□ -0.77
SF3A1-203ENST00000444440 CREB3L4Q8TEY5 395 aa10.26□□□□□ -0.77
SF3A1-203ENST00000444440 CDKL2Q92772 493 aa10.26□□□□□ -0.77
SF3A1-203ENST00000444440 TSLPQ969D9 159 aa10.26□□□□□ -0.77
SF3A1-203ENST00000444440 ESAMQ96AP7 390 aa10.26□□□□□ -0.77
SF3A1-203ENST00000444440 RHBDF1Q96CC6 855 aa10.26□□□□□ -0.77
SF3A1-203ENST00000444440 PEX11GQ96HA9 241 aa10.26□□□□□ -0.77
SF3A1-203ENST00000444440 CNDP1Q96KN2 507 aa10.26□□□□□ -0.77
SF3A1-203ENST00000444440 PSMG3-AS1Q96PY0 264 aa10.26□□□□□ -0.77
SF3A1-203ENST00000444440 CYTH2Q99418 400 aa10.26□□□□□ -0.77
SF3A1-203ENST00000444440 GPR22Q99680 433 aa10.26□□□□□ -0.77
SF3A1-203ENST00000444440 RBBP8Q99708 897 aa10.26□□□□□ -0.77
SF3A1-203ENST00000444440 NPAS2Q99743 824 aa10.26□□□□□ -0.77
SF3A1-203ENST00000444440 LRRC4CQ9HCJ2 640 aa10.26□□□□□ -0.77
SF3A1-203ENST00000444440 GPAMQ9HCL2 828 aa10.26□□□□□ -0.77
SF3A1-203ENST00000444440 ASB1Q9Y576 335 aa10.26□□□□□ -0.77
SF3A1-203ENST00000444440 POLEQ07864 2286 aa10.26□□□□□ -0.77
SF3A1-203ENST00000444440 MYO7BQ6PIF6 2116 aa10.25□□□□□ -0.77
SF3A1-203ENST00000444440 PABPN1LA6NDY0 278 aaKnown RBP10.25□□□□□ -0.77
SF3A1-203ENST00000444440 MAN1A2O60476 641 aa10.25□□□□□ -0.77
SF3A1-203ENST00000444440 GALR3O60755 368 aaPredicted RBP10.25□□□□□ -0.77
SF3A1-203ENST00000444440 WDR47O94967 919 aa10.25□□□□□ -0.77
SF3A1-203ENST00000444440 SERPINA7P05543 415 aa10.25□□□□□ -0.77
SF3A1-203ENST00000444440 SERPIND1P05546 499 aa10.25□□□□□ -0.77
SF3A1-203ENST00000444440 SLC35G6P0C7Q6 338 aa10.25□□□□□ -0.77
SF3A1-203ENST00000444440 CTAGE8P0CG41 777 aa10.25□□□□□ -0.77
SF3A1-203ENST00000444440 C8orf89P0DMQ9 161 aa10.25□□□□□ -0.77
SF3A1-203ENST00000444440 SMIM10L1P0DMW3 83 aa10.25□□□□□ -0.77
SF3A1-203ENST00000444440 CD1DP15813 335 aa10.25□□□□□ -0.77
SF3A1-203ENST00000444440 CXCR2P25025 360 aa10.25□□□□□ -0.77
SF3A1-203ENST00000444440 GRK3P35626 688 aa10.25□□□□□ -0.77
SF3A1-203ENST00000444440 HNF4AP41235 474 aa10.25□□□□□ -0.77
SF3A1-203ENST00000444440 KCNC1P48547 511 aa10.25□□□□□ -0.77
SF3A1-203ENST00000444440 CDKL1Q00532 357 aa10.25□□□□□ -0.77
SF3A1-203ENST00000444440 GUCY2DQ02846 1103 aa10.25□□□□□ -0.77
SF3A1-203ENST00000444440 ZNF169Q14929 603 aaPredicted RBP10.25□□□□□ -0.77
SF3A1-203ENST00000444440 TGFBIQ15582 683 aa10.25□□□□□ -0.77
SF3A1-203ENST00000444440 ZKSCAN8Q15776 578 aaPredicted RBP10.25□□□□□ -0.77
SF3A1-203ENST00000444440 KBTBD12Q3ZCT8 623 aa10.25□□□□□ -0.77
SF3A1-203ENST00000444440 MINDY4Q4G0A6 757 aa10.25□□□□□ -0.77
SF3A1-203ENST00000444440 DEFB134Q4QY38 66 aa10.25□□□□□ -0.77
SF3A1-203ENST00000444440 MFSD4BQ5TF39 518 aa10.25□□□□□ -0.77
SF3A1-203ENST00000444440 NXPE4Q6UWF7 544 aa10.25□□□□□ -0.77
SF3A1-203ENST00000444440 CEP128Q6ZU80 1094 aa10.25□□□□□ -0.77
SF3A1-203ENST00000444440 C3orf62Q6ZUJ4 267 aa10.25□□□□□ -0.77
SF3A1-203ENST00000444440 CYS1Q717R9 158 aa10.25□□□□□ -0.77
SF3A1-203ENST00000444440 CPEB2Q7Z5Q1 589 aaKnown RBP10.25□□□□□ -0.77
SF3A1-203ENST00000444440 CMC1Q7Z7K0 106 aa10.25□□□□□ -0.77
SF3A1-203ENST00000444440 CCDC25Q86WR0 208 aa10.25□□□□□ -0.77
SF3A1-203ENST00000444440 CTAGE4Q8IX94 777 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms