RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 OSER1Q9NX31 292 aa6.46□□□□□ -1.37
CSDE1-205ENST00000438362 ZNF222Q9UK12 451 aa6.46□□□□□ -1.37
CSDE1-205ENST00000438362 PCDHGB5Q9Y5G0 923 aa6.46□□□□□ -1.37
CSDE1-205ENST00000438362 SESN1Q9Y6P5 492 aa6.46□□□□□ -1.37
CSDE1-205ENST00000438362 PMF1-BGLAPU3KQ54 211 aa6.46□□□□□ -1.37
CSDE1-205ENST00000438362 A0A1W2PRU2 124 aa6.46□□□□□ -1.38
CSDE1-205ENST00000438362 ANKRD33BA6NCL7 494 aa6.46□□□□□ -1.38
CSDE1-205ENST00000438362 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.46□□□□□ -1.38
CSDE1-205ENST00000438362 SLC16A5O15375 505 aa6.46□□□□□ -1.38
CSDE1-205ENST00000438362 OR1F1O43749 312 aa6.46□□□□□ -1.38
CSDE1-205ENST00000438362 SLITRK5O94991 958 aa6.46□□□□□ -1.38
CSDE1-205ENST00000438362 CD247P20963 164 aa6.46□□□□□ -1.38
CSDE1-205ENST00000438362 VIPR1P32241 457 aa6.46□□□□□ -1.38
CSDE1-205ENST00000438362 PREPP48147 710 aa6.46□□□□□ -1.38
CSDE1-205ENST00000438362 PHC1P78364 1004 aa6.46□□□□□ -1.38
CSDE1-205ENST00000438362 KEAP1Q14145 624 aa6.46□□□□□ -1.38
CSDE1-205ENST00000438362 SLC14A2Q15849 920 aa6.46□□□□□ -1.38
CSDE1-205ENST00000438362 MORN1Q5T089 497 aa6.46□□□□□ -1.38
CSDE1-205ENST00000438362 C6orf183Q5T699 404 aa6.46□□□□□ -1.38
CSDE1-205ENST00000438362 METTL2BQ6P1Q9 378 aaKnown RBP6.46□□□□□ -1.38
CSDE1-205ENST00000438362 CCBE1Q6UXH8 406 aaPredicted RBP6.46□□□□□ -1.38
CSDE1-205ENST00000438362 ZNF367Q7RTV3 350 aa6.46□□□□□ -1.38
CSDE1-205ENST00000438362 RNF130Q86XS8 419 aa6.46□□□□□ -1.38
CSDE1-205ENST00000438362 CLECL1Q8IZS7 167 aa6.46□□□□□ -1.38
CSDE1-205ENST00000438362 NATD1Q8N6N6 113 aa6.46□□□□□ -1.38
CSDE1-205ENST00000438362 ZNF548Q8NEK5 533 aaPredicted RBP6.46□□□□□ -1.38
CSDE1-205ENST00000438362 OR2T11Q8NH01 316 aa6.46□□□□□ -1.38
CSDE1-205ENST00000438362 ZFP90Q8TF47 636 aa6.46□□□□□ -1.38
CSDE1-205ENST00000438362 FATE1Q969F0 183 aa6.46□□□□□ -1.38
CSDE1-205ENST00000438362 TMEM203Q969S6 136 aa6.46□□□□□ -1.38
CSDE1-205ENST00000438362 APIPQ96GX9 242 aa6.46□□□□□ -1.38
CSDE1-205ENST00000438362 CNDP2Q96KP4 475 aaKnown RBP6.46□□□□□ -1.38
CSDE1-205ENST00000438362 ART5Q96L15 291 aa6.46□□□□□ -1.38
CSDE1-205ENST00000438362 CITED4Q96RK1 184 aa6.46□□□□□ -1.38
CSDE1-205ENST00000438362 CCDC3Q9BQI4 270 aa6.46□□□□□ -1.38
CSDE1-205ENST00000438362 SPATA9Q9BWV2 254 aa6.46□□□□□ -1.38
CSDE1-205ENST00000438362 ASPNQ9BXN1 380 aa6.46□□□□□ -1.38
CSDE1-205ENST00000438362 MIR1-1HGQ9H1L0 117 aa6.46□□□□□ -1.38
CSDE1-205ENST00000438362 TBC1D17Q9HA65 648 aa6.46□□□□□ -1.38
CSDE1-205ENST00000438362 THG1LQ9NWX6 298 aaKnown RBP6.46□□□□□ -1.38
CSDE1-205ENST00000438362 ISM1B1AKI9 464 aa6.46□□□□□ -1.38
CSDE1-205ENST00000438362 FAM155AB1AL88 458 aaPredicted RBP6.46□□□□□ -1.38
CSDE1-205ENST00000438362 CCL16O15467 120 aa6.46□□□□□ -1.38
CSDE1-205ENST00000438362 GPR39O43194 453 aa6.46□□□□□ -1.38
CSDE1-205ENST00000438362 MRPS14O60783 128 aaKnown RBP6.46□□□□□ -1.38
CSDE1-205ENST00000438362 SOX14O95416 240 aa6.46□□□□□ -1.38
CSDE1-205ENST00000438362 C8AP07357 584 aa6.46□□□□□ -1.38
CSDE1-205ENST00000438362 HPGDP15428 266 aa6.46□□□□□ -1.38
CSDE1-205ENST00000438362 KELP23276 732 aa6.46□□□□□ -1.38
CSDE1-205ENST00000438362 CD40LGP29965 261 aa6.46□□□□□ -1.38
CSDE1-205ENST00000438362 CCND3P30281 292 aaPredicted RBP6.46□□□□□ -1.38
CSDE1-205ENST00000438362 CCT3P49368 545 aaKnown RBP6.46□□□□□ -1.38
CSDE1-205ENST00000438362 CENPAP49450 140 aa6.46□□□□□ -1.38
CSDE1-205ENST00000438362 CRISP3P54108 245 aa6.46□□□□□ -1.38
CSDE1-205ENST00000438362 DOC2AQ14183 400 aa6.46□□□□□ -1.38
CSDE1-205ENST00000438362 SPCS2Q15005 226 aa6.46□□□□□ -1.38
CSDE1-205ENST00000438362 ATP13A5Q4VNC0 1218 aa6.46□□□□□ -1.38
CSDE1-205ENST00000438362 ARSIQ5FYB1 569 aa6.46□□□□□ -1.38
CSDE1-205ENST00000438362 MANEALQ5VSG8 457 aa6.46□□□□□ -1.38
CSDE1-205ENST00000438362 REEP3Q6NUK4 255 aa6.46□□□□□ -1.38
CSDE1-205ENST00000438362 TMEM53Q6P2H8 277 aa6.46□□□□□ -1.38
CSDE1-205ENST00000438362 NDNFQ8TB73 568 aa6.46□□□□□ -1.38
CSDE1-205ENST00000438362 PIGXQ8TBF5 258 aa6.46□□□□□ -1.38
CSDE1-205ENST00000438362 CHPT1Q8WUD6 406 aa6.46□□□□□ -1.38
CSDE1-205ENST00000438362 SCAMP4Q969E2 229 aa6.46□□□□□ -1.38
CSDE1-205ENST00000438362 PDLIM5Q96HC4 596 aaKnown RBP6.46□□□□□ -1.38
CSDE1-205ENST00000438362 SCLYQ96I15 445 aa6.46□□□□□ -1.38
CSDE1-205ENST00000438362 TEX37Q96LM6 180 aa6.46□□□□□ -1.38
CSDE1-205ENST00000438362 RTP3Q9BQQ7 232 aa6.46□□□□□ -1.38
CSDE1-205ENST00000438362 NTMT1Q9BV86 223 aa6.46□□□□□ -1.38
CSDE1-205ENST00000438362 YIPF2Q9BWQ6 316 aa6.46□□□□□ -1.38
CSDE1-205ENST00000438362 MND1Q9BWT6 205 aa6.46□□□□□ -1.38
CSDE1-205ENST00000438362 RHBGQ9H310 441 aa6.46□□□□□ -1.38
CSDE1-205ENST00000438362 ZNF385DQ9H6B1 395 aa6.46□□□□□ -1.38
CSDE1-205ENST00000438362 MARCH7Q9H992 704 aa6.46□□□□□ -1.38
CSDE1-205ENST00000438362 CPNE5Q9HCH3 593 aa6.46□□□□□ -1.38
CSDE1-205ENST00000438362 IL1RAPQ9NPH3 570 aa6.46□□□□□ -1.38
CSDE1-205ENST00000438362 TAS2R7Q9NYW3 318 aa6.46□□□□□ -1.38
CSDE1-205ENST00000438362 GPRC5BQ9NZH0 403 aa6.46□□□□□ -1.38
CSDE1-205ENST00000438362 DNAJC27Q9NZQ0 273 aa6.46□□□□□ -1.38
CSDE1-205ENST00000438362 RHCGQ9UBD6 479 aa6.46□□□□□ -1.38
CSDE1-205ENST00000438362 SEC14L4Q9UDX3 406 aa6.46□□□□□ -1.38
CSDE1-205ENST00000438362 MALT1Q9UDY8 824 aa6.46□□□□□ -1.38
CSDE1-205ENST00000438362 DLGAP4Q9Y2H0 992 aa6.46□□□□□ -1.38
CSDE1-205ENST00000438362 FAM86C2PA6NEL3 165 aa6.45□□□□□ -1.38
CSDE1-205ENST00000438362 EIF3FO00303 357 aaPredicted RBP6.45□□□□□ -1.38
CSDE1-205ENST00000438362 ORC5O43913 435 aa6.45□□□□□ -1.38
CSDE1-205ENST00000438362 RFPL2O75678 378 aa6.45□□□□□ -1.38
CSDE1-205ENST00000438362 LAMP1P11279 417 aa6.45□□□□□ -1.38
CSDE1-205ENST00000438362 HOXD8P13378 290 aaPredicted RBP6.45□□□□□ -1.38
CSDE1-205ENST00000438362 IGFBP6P24592 240 aaPredicted RBP6.45□□□□□ -1.38
CSDE1-205ENST00000438362 HOXD9P28356 352 aaPredicted RBP6.45□□□□□ -1.38
CSDE1-205ENST00000438362 TIA1P31483 386 aaKnown RBP eCLIP6.45□□□□□ -1.386e-10■■■■□ 20.6
CSDE1-205ENST00000438362 SLC6A4P31645 630 aa6.45□□□□□ -1.38
CSDE1-205ENST00000438362 CXCR4P61073 352 aa6.45□□□□□ -1.38
CSDE1-205ENST00000438362 ADARB1P78563 741 aaKnown RBP6.45□□□□□ -1.38
CSDE1-205ENST00000438362 GRSF1Q12849 480 aaKnown RBP eCLIP6.45□□□□□ -1.386e-6■■□□□ 12.3
CSDE1-205ENST00000438362 FADDQ13158 208 aa6.45□□□□□ -1.38
CSDE1-205ENST00000438362 EXOC3L2Q2M3D2 409 aa6.45□□□□□ -1.38
CSDE1-205ENST00000438362 CTSL3PQ5NE16 218 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms