RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 OR5T3Q8NGG3 340 aa17.38■□□□□ 0.37
PSPC1-202ENST00000427943 SSC4DQ8WTU2 575 aa17.38■□□□□ 0.37
PSPC1-202ENST00000427943 PEX11GQ96HA9 241 aa17.38■□□□□ 0.37
PSPC1-202ENST00000427943 LMF1Q96S06 567 aa17.38■□□□□ 0.37
PSPC1-202ENST00000427943 MCMBPQ9BTE3 642 aa17.38■□□□□ 0.37
PSPC1-202ENST00000427943 SARGQ9BW04 601 aa17.38■□□□□ 0.37
PSPC1-202ENST00000427943 FAM129AQ9BZQ8 928 aa17.38■□□□□ 0.37
PSPC1-202ENST00000427943 CAB39LQ9H9S4 337 aa17.38■□□□□ 0.37
PSPC1-202ENST00000427943 GPAMQ9HCL2 828 aa17.38■□□□□ 0.37
PSPC1-202ENST00000427943 CTNNAL1Q9UBT7 734 aa17.38■□□□□ 0.37
PSPC1-202ENST00000427943 SLC22A14Q9Y267 594 aa17.38■□□□□ 0.37
PSPC1-202ENST00000427943 MTO1Q9Y2Z2 717 aaKnown RBP17.38■□□□□ 0.37
PSPC1-202ENST00000427943 OARD1Q9Y530 152 aa17.38■□□□□ 0.37
PSPC1-202ENST00000427943 SLC22A7Q9Y694 548 aa17.38■□□□□ 0.37
PSPC1-202ENST00000427943 CTAGE15A4D2H0 777 aa17.37■□□□□ 0.37
PSPC1-202ENST00000427943 ANKUB1A6NFN9 424 aa17.37■□□□□ 0.37
PSPC1-202ENST00000427943 CDC123O75794 336 aaPredicted RBP17.37■□□□□ 0.37
PSPC1-202ENST00000427943 WFS1O76024 890 aa17.37■□□□□ 0.37
PSPC1-202ENST00000427943 ZNF888P0CJ79 500 aaPredicted RBP17.37■□□□□ 0.37
PSPC1-202ENST00000427943 GP1BBP13224 206 aa17.37■□□□□ 0.37
PSPC1-202ENST00000427943 SLC12A2P55011 1212 aa17.37■□□□□ 0.37
PSPC1-202ENST00000427943 OLR1P78380 273 aa17.37■□□□□ 0.37
PSPC1-202ENST00000427943 REEP5Q00765 189 aa17.37■□□□□ 0.37
PSPC1-202ENST00000427943 CBLBQ13191 982 aa17.37■□□□□ 0.37
PSPC1-202ENST00000427943 DEFB134Q4QY38 66 aa17.37■□□□□ 0.37
PSPC1-202ENST00000427943 SYT10Q6XYQ8 523 aa17.37■□□□□ 0.37
PSPC1-202ENST00000427943 RIPOR1Q6ZS17 1223 aa17.37■□□□□ 0.37
PSPC1-202ENST00000427943 MAATS1Q7Z4T9 603 aa17.37■□□□□ 0.37
PSPC1-202ENST00000427943 CPEB2Q7Z5Q1 589 aaKnown RBP17.37■□□□□ 0.37
PSPC1-202ENST00000427943 CTAGE6Q86UF2 777 aa17.37■□□□□ 0.37
PSPC1-202ENST00000427943 TBC1D19Q8N5T2 526 aa17.37■□□□□ 0.37
PSPC1-202ENST00000427943 OR1N1Q8NGS0 311 aa17.37■□□□□ 0.37
PSPC1-202ENST00000427943 GRHL3Q8TE85 626 aa17.37■□□□□ 0.37
PSPC1-202ENST00000427943 IMMP1LQ96LU5 166 aa17.37■□□□□ 0.37
PSPC1-202ENST00000427943 CYTH2Q99418 400 aa17.37■□□□□ 0.37
PSPC1-202ENST00000427943 TUBB6Q9BUF5 446 aa17.37■□□□□ 0.37
PSPC1-202ENST00000427943 AGPAT4Q9NRZ5 378 aa17.37■□□□□ 0.37
PSPC1-202ENST00000427943 MAST4O15021 2626 aa17.37■□□□□ 0.37
PSPC1-202ENST00000427943 DYTNA2CJ06 578 aa17.36■□□□□ 0.37
PSPC1-202ENST00000427943 NCF1BA6NI72 391 aaPredicted RBP17.36■□□□□ 0.37
PSPC1-202ENST00000427943 NCF1CA8MVU1 366 aaPredicted RBP17.36■□□□□ 0.37
PSPC1-202ENST00000427943 NCF1P14598 390 aaPredicted RBP17.36■□□□□ 0.37
PSPC1-202ENST00000427943 SCTRP47872 440 aa17.36■□□□□ 0.37
PSPC1-202ENST00000427943 CDKL1Q00532 357 aa17.36■□□□□ 0.37
PSPC1-202ENST00000427943 PWP1Q13610 501 aa17.36■□□□□ 0.37
PSPC1-202ENST00000427943 ELOAQ14241 798 aaKnown RBP17.36■□□□□ 0.37
PSPC1-202ENST00000427943 HERC3Q15034 1050 aa17.36■□□□□ 0.37
PSPC1-202ENST00000427943 BTBD16Q32M84 506 aa17.36■□□□□ 0.37
PSPC1-202ENST00000427943 ANKRD37Q7Z713 158 aa17.36■□□□□ 0.37
PSPC1-202ENST00000427943 ADAMTSL2Q86TH1 951 aa17.36■□□□□ 0.37
PSPC1-202ENST00000427943 SPATA6LQ8N4H0 392 aa17.36■□□□□ 0.37
PSPC1-202ENST00000427943 AFAP1L2Q8N4X5 818 aa17.36■□□□□ 0.37
PSPC1-202ENST00000427943 ANKRD53Q8N9V6 530 aa17.36■□□□□ 0.37
PSPC1-202ENST00000427943 NT5CQ8TCD5 201 aa17.36■□□□□ 0.37
PSPC1-202ENST00000427943 ANKRD7Q92527 254 aa17.36■□□□□ 0.37
PSPC1-202ENST00000427943 MAGEB10Q96LZ2 347 aaPredicted RBP17.36■□□□□ 0.37
PSPC1-202ENST00000427943 BARD1Q99728 777 aaKnown RBP17.36■□□□□ 0.37
PSPC1-202ENST00000427943 PELI2Q9HAT8 420 aa17.36■□□□□ 0.37
PSPC1-202ENST00000427943 POPDC3Q9HBV1 291 aa17.36■□□□□ 0.37
PSPC1-202ENST00000427943 TXNDC16Q9P2K2 825 aa17.36■□□□□ 0.37
PSPC1-202ENST00000427943 C19orf25Q9UFG5 118 aaPredicted RBP17.36■□□□□ 0.37
PSPC1-202ENST00000427943 ZFP69BQ9UJL9 534 aa17.36■□□□□ 0.37
PSPC1-202ENST00000427943 NAV2Q8IVL1 2488 aa17.35■□□□□ 0.37
PSPC1-202ENST00000427943 TCRBV9S1A1TA0A576 114 aa17.35■□□□□ 0.37
PSPC1-202ENST00000427943 EIF3HO15372 352 aaKnown RBP eCLIP17.35■□□□□ 0.37
PSPC1-202ENST00000427943 PHGDHO43175 533 aaKnown RBP17.35■□□□□ 0.37
PSPC1-202ENST00000427943 GALR3O60755 368 aaPredicted RBP17.35■□□□□ 0.37
PSPC1-202ENST00000427943 DNAJB6O75190 326 aa17.35■□□□□ 0.37
PSPC1-202ENST00000427943 WDR47O94967 919 aa17.35■□□□□ 0.37
PSPC1-202ENST00000427943 CYC1P08574 325 aa17.35■□□□□ 0.37
PSPC1-202ENST00000427943 ALOX12P18054 663 aa17.35■□□□□ 0.37
PSPC1-202ENST00000427943 HNF4AP41235 474 aa17.35■□□□□ 0.37
PSPC1-202ENST00000427943 GDF5P43026 501 aa17.35■□□□□ 0.37
PSPC1-202ENST00000427943 RGS1Q08116 209 aa17.35■□□□□ 0.37
PSPC1-202ENST00000427943 RBBP5Q15291 538 aaKnown RBP17.35■□□□□ 0.37
PSPC1-202ENST00000427943 HIST2H2BCQ6DN03 193 aa17.35■□□□□ 0.37
PSPC1-202ENST00000427943 NXPE4Q6UWF7 544 aa17.35■□□□□ 0.37
PSPC1-202ENST00000427943 CCDC25Q86WR0 208 aa17.35■□□□□ 0.37
PSPC1-202ENST00000427943 CDKL2Q92772 493 aa17.35■□□□□ 0.37
PSPC1-202ENST00000427943 TSLPQ969D9 159 aa17.35■□□□□ 0.37
PSPC1-202ENST00000427943 RBBP8Q99708 897 aa17.35■□□□□ 0.37
PSPC1-202ENST00000427943 AIF1LQ9BQI0 150 aa17.35■□□□□ 0.37
PSPC1-202ENST00000427943 LANCL2Q9NS86 450 aa17.35■□□□□ 0.37
PSPC1-202ENST00000427943 KCNE2Q9Y6J6 123 aa17.35■□□□□ 0.37
PSPC1-202ENST00000427943 E2F3O00716 465 aa17.34■□□□□ 0.37
PSPC1-202ENST00000427943 WISP3O95389 354 aaPredicted RBP17.34■□□□□ 0.37
PSPC1-202ENST00000427943 ICAM2P13598 275 aa17.34■□□□□ 0.37
PSPC1-202ENST00000427943 AHRP35869 848 aa17.34■□□□□ 0.37
PSPC1-202ENST00000427943 AGTR2P50052 363 aa17.34■□□□□ 0.37
PSPC1-202ENST00000427943 TNFSF10P50591 281 aa17.34■□□□□ 0.37
PSPC1-202ENST00000427943 PLTPP55058 493 aa17.34■□□□□ 0.37
PSPC1-202ENST00000427943 GPX6P59796 221 aa17.34■□□□□ 0.37
PSPC1-202ENST00000427943 RAB8AP61006 207 aa17.34■□□□□ 0.37
PSPC1-202ENST00000427943 ETF1P62495 437 aaKnown RBP17.34■□□□□ 0.37
PSPC1-202ENST00000427943 POU4F1Q01851 419 aa17.34■□□□□ 0.37
PSPC1-202ENST00000427943 RHAGQ02094 409 aa17.34■□□□□ 0.37
PSPC1-202ENST00000427943 ZNF33BQ06732 778 aa17.34■□□□□ 0.37
PSPC1-202ENST00000427943 USP10Q14694 798 aaKnown RBP17.34■□□□□ 0.37
PSPC1-202ENST00000427943 ABRAXAS2Q15018 415 aa17.34■□□□□ 0.37
PSPC1-202ENST00000427943 FBXO48Q5FWF7 155 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms