RNA–Protein interactions for RNA: ENST00000422991.1

COL7A1-202, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-202ENST00000422991 ZNF28P17035 718 aa16.19■□□□□ 0.18
COL7A1-202ENST00000422991 SLC5A2P31639 672 aa16.19■□□□□ 0.18
COL7A1-202ENST00000422991 PIK3CBP42338 1070 aa16.19■□□□□ 0.18
COL7A1-202ENST00000422991 EMP3P54852 163 aa16.19■□□□□ 0.18
COL7A1-202ENST00000422991 RGS1Q08116 209 aa16.19■□□□□ 0.18
COL7A1-202ENST00000422991 BST1Q10588 318 aa16.19■□□□□ 0.18
COL7A1-202ENST00000422991 HYAL2Q12891 473 aa16.19■□□□□ 0.18
COL7A1-202ENST00000422991 C10orf62Q5T681 223 aaPredicted RBP16.19■□□□□ 0.18
COL7A1-202ENST00000422991 YOD1Q5VVQ6 348 aaPredicted RBP16.19■□□□□ 0.18
COL7A1-202ENST00000422991 FRG2Q64ET8 278 aa16.19■□□□□ 0.18
COL7A1-202ENST00000422991 CUZD1Q86UP6 607 aa16.19■□□□□ 0.18
COL7A1-202ENST00000422991 TRIM42Q8IWZ5 723 aa16.19■□□□□ 0.18
COL7A1-202ENST00000422991 ZNF473Q8WTR7 871 aaKnown RBP16.19■□□□□ 0.18
COL7A1-202ENST00000422991 ZCCHC14Q8WYQ9 949 aaKnown RBP16.19■□□□□ 0.18
COL7A1-202ENST00000422991 FRG2BQ96QU4 278 aa16.19■□□□□ 0.18
COL7A1-202ENST00000422991 KCNA7Q96RP8 456 aa16.19■□□□□ 0.18
COL7A1-202ENST00000422991 ULBP3Q9BZM4 244 aa16.19■□□□□ 0.18
COL7A1-202ENST00000422991 SLC6A16Q9GZN6 736 aa16.19■□□□□ 0.18
COL7A1-202ENST00000422991 ACTR5Q9H9F9 607 aaPredicted RBP16.19■□□□□ 0.18
COL7A1-202ENST00000422991 EML4Q9HC35 981 aaKnown RBP16.19■□□□□ 0.18
COL7A1-202ENST00000422991 DMRT3Q9NQL9 472 aa16.19■□□□□ 0.18
COL7A1-202ENST00000422991 INTS9Q9NV88 658 aaKnown RBP16.19■□□□□ 0.18
COL7A1-202ENST00000422991 ADGRE2Q9UHX3 823 aa16.19■□□□□ 0.18
COL7A1-202ENST00000422991 AK5Q9Y6K8 562 aa16.19■□□□□ 0.18
COL7A1-202ENST00000422991 DMXL2Q8TDJ6 3036 aa16.18■□□□□ 0.18
COL7A1-202ENST00000422991 HYKKA2RU49 373 aa16.18■□□□□ 0.18
COL7A1-202ENST00000422991 MANBAO00462 879 aa16.18■□□□□ 0.18
COL7A1-202ENST00000422991 ITM2AO43736 263 aa16.18■□□□□ 0.18
COL7A1-202ENST00000422991 CPNE3O75131 537 aaKnown RBP16.18■□□□□ 0.18
COL7A1-202ENST00000422991 LYPLA1O75608 230 aaPredicted RBP16.18■□□□□ 0.18
COL7A1-202ENST00000422991 STK17BO94768 372 aa16.18■□□□□ 0.18
COL7A1-202ENST00000422991 KIAA0754O94854 1291 aa16.18■□□□□ 0.18
COL7A1-202ENST00000422991 DLGAP3O95886 979 aa16.18■□□□□ 0.18
COL7A1-202ENST00000422991 HMOX2P30519 316 aa16.18■□□□□ 0.18
COL7A1-202ENST00000422991 FOXA1P55317 472 aa16.18■□□□□ 0.18
COL7A1-202ENST00000422991 ABCE1P61221 599 aaKnown RBP16.18■□□□□ 0.18
COL7A1-202ENST00000422991 IFT88Q13099 833 aa16.18■□□□□ 0.18
COL7A1-202ENST00000422991 STX3Q13277 289 aa16.18■□□□□ 0.18
COL7A1-202ENST00000422991 DDX39BQ13838 428 aaKnown RBP16.18■□□□□ 0.18
COL7A1-202ENST00000422991 TCHHL1Q5QJ38 904 aaPredicted RBP16.18■□□□□ 0.18
COL7A1-202ENST00000422991 MANEAQ5SRI9 462 aa16.18■□□□□ 0.18
COL7A1-202ENST00000422991 GARNL3Q5VVW2 1013 aa16.18■□□□□ 0.18
COL7A1-202ENST00000422991 TTC19Q6DKK2 380 aaPredicted RBP16.18■□□□□ 0.18
COL7A1-202ENST00000422991 TMEM214Q6NUQ4 689 aaKnown RBP16.18■□□□□ 0.18
COL7A1-202ENST00000422991 RNF175Q8N4F7 328 aa16.18■□□□□ 0.18
COL7A1-202ENST00000422991 KCT2Q8NC54 265 aa16.18■□□□□ 0.18
COL7A1-202ENST00000422991 HUS1BQ8NHY5 278 aa16.18■□□□□ 0.18
COL7A1-202ENST00000422991 METTL6Q8TCB7 284 aa16.18■□□□□ 0.18
COL7A1-202ENST00000422991 CCT6BQ92526 530 aa16.18■□□□□ 0.18
COL7A1-202ENST00000422991 RNF31Q96EP0 1072 aa16.18■□□□□ 0.18
COL7A1-202ENST00000422991 MTERF1Q99551 399 aaKnown RBP16.18■□□□□ 0.18
COL7A1-202ENST00000422991 NDC1Q9BTX1 674 aa16.18■□□□□ 0.18
COL7A1-202ENST00000422991 MS4A8Q9BY19 250 aa16.18■□□□□ 0.18
COL7A1-202ENST00000422991 SPRY4Q9C004 299 aa16.18■□□□□ 0.18
COL7A1-202ENST00000422991 AICDAQ9GZX7 198 aa16.18■□□□□ 0.18
COL7A1-202ENST00000422991 ELOVL6Q9H5J4 265 aa16.18■□□□□ 0.18
COL7A1-202ENST00000422991 THSD1Q9NS62 852 aa16.18■□□□□ 0.18
COL7A1-202ENST00000422991 CUTCQ9NTM9 273 aa16.18■□□□□ 0.18
COL7A1-202ENST00000422991 ACSL6Q9UKU0 697 aa16.18■□□□□ 0.18
COL7A1-202ENST00000422991 SNX6Q9UNH7 406 aa16.18■□□□□ 0.18
COL7A1-202ENST00000422991 MRPS2Q9Y399 296 aaKnown RBP16.18■□□□□ 0.18
COL7A1-202ENST00000422991 TMEM184BQ9Y519 407 aaPredicted RBP16.18■□□□□ 0.18
COL7A1-202ENST00000422991 ZZEF1O43149 2961 aa16.17■□□□□ 0.18
COL7A1-202ENST00000422991 FOXE1O00358 373 aaPredicted RBP16.17■□□□□ 0.18
COL7A1-202ENST00000422991 KLF11O14901 512 aa16.17■□□□□ 0.18
COL7A1-202ENST00000422991 HSPA4LO95757 839 aa16.17■□□□□ 0.18
COL7A1-202ENST00000422991 KRT6AP02538 564 aa16.17■□□□□ 0.18
COL7A1-202ENST00000422991 KRT6BP04259 564 aa16.17■□□□□ 0.18
COL7A1-202ENST00000422991 NTRK1P04629 796 aa16.17■□□□□ 0.18
COL7A1-202ENST00000422991 HBQ1P09105 142 aa16.17■□□□□ 0.18
COL7A1-202ENST00000422991 CD82P27701 267 aa16.17■□□□□ 0.18
COL7A1-202ENST00000422991 HNRNPH1P31943 449 aaKnown RBP16.17■□□□□ 0.18
COL7A1-202ENST00000422991 SLC1A6P48664 564 aa16.17■□□□□ 0.18
COL7A1-202ENST00000422991 KRT6CP48668 564 aa16.17■□□□□ 0.18
COL7A1-202ENST00000422991 ATP1A2P50993 1020 aa16.17■□□□□ 0.18
COL7A1-202ENST00000422991 NEK2P51955 445 aa16.17■□□□□ 0.18
COL7A1-202ENST00000422991 ARSFP54793 590 aa16.17■□□□□ 0.18
COL7A1-202ENST00000422991 SNRPNP63162 240 aaKnown RBP16.17■□□□□ 0.18
COL7A1-202ENST00000422991 PHEXP78562 749 aa16.17■□□□□ 0.18
COL7A1-202ENST00000422991 MUM1Q2TAK8 710 aa16.17■□□□□ 0.18
COL7A1-202ENST00000422991 FAM214AQ32MH5 1076 aa16.17■□□□□ 0.18
COL7A1-202ENST00000422991 ADPRMQ3LIE5 342 aa16.17■□□□□ 0.18
COL7A1-202ENST00000422991 TOR1AIP1Q5JTV8 583 aa16.17■□□□□ 0.18
COL7A1-202ENST00000422991 RHBDD2Q6NTF9 364 aa16.17■□□□□ 0.18
COL7A1-202ENST00000422991 ARFGAP2Q8N6H7 521 aa16.17■□□□□ 0.18
COL7A1-202ENST00000422991 SLC38A9Q8NBW4 561 aa16.17■□□□□ 0.18
COL7A1-202ENST00000422991 C20orf27Q9GZN8 174 aa16.17■□□□□ 0.18
COL7A1-202ENST00000422991 MANSC1Q9H8J5 431 aa16.17■□□□□ 0.18
COL7A1-202ENST00000422991 ZNF395Q9H8N7 513 aaPredicted RBP16.17■□□□□ 0.18
COL7A1-202ENST00000422991 FARSBQ9NSD9 589 aaKnown RBP16.17■□□□□ 0.18
COL7A1-202ENST00000422991 DHCR7Q9UBM7 475 aaKnown RBP16.17■□□□□ 0.18
COL7A1-202ENST00000422991 ZMIZ1Q9ULJ6 1067 aa16.17■□□□□ 0.18
COL7A1-202ENST00000422991 PPT2Q9UMR5 302 aa16.17■□□□□ 0.18
COL7A1-202ENST00000422991 TIMM22Q9Y584 194 aa16.17■□□□□ 0.18
COL7A1-202ENST00000422991 AHCTF1Q8WYP5 2266 aa16.16■□□□□ 0.18
COL7A1-202ENST00000422991 LRIT2A6NDA9 550 aa16.16■□□□□ 0.18
COL7A1-202ENST00000422991 MAGEB17A8MXT2 336 aa16.16■□□□□ 0.18
COL7A1-202ENST00000422991 C4orf51C9J302 202 aa16.16■□□□□ 0.18
COL7A1-202ENST00000422991 DSCR3O14972 297 aa16.16■□□□□ 0.18
COL7A1-202ENST00000422991 AZIN1O14977 448 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms