RNA–Protein interactions for RNA: ENST00000414558.2

ATG4C-204, Transcript of autophagy related 4C cysteine peptidase, humanhuman

TSL 5

Gene ATG4C, Length 464 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4C-204ENST00000414558 EXOC1Q9NV70 894 aa4.05□□□□□ -1.76
ATG4C-204ENST00000414558 BCCIPQ9P287 314 aaKnown RBP eCLIP4.05□□□□□ -1.76
ATG4C-204ENST00000414558 POLKQ9UBT6 870 aa4.05□□□□□ -1.76
ATG4C-204ENST00000414558 SLC12A6Q9UHW9 1150 aa4.05□□□□□ -1.76
ATG4C-204ENST00000414558 PDHXO00330 501 aa4.04□□□□□ -1.76
ATG4C-204ENST00000414558 SH3BGRLO75368 114 aa4.04□□□□□ -1.76
ATG4C-204ENST00000414558 LUC7L3O95232 432 aaKnown RBP4.04□□□□□ -1.76
ATG4C-204ENST00000414558 ADORA3P0DMS8 318 aa4.04□□□□□ -1.76
ATG4C-204ENST00000414558 IL11P20809 199 aa4.04□□□□□ -1.76
ATG4C-204ENST00000414558 ACAT1P24752 427 aaKnown RBP4.04□□□□□ -1.76
ATG4C-204ENST00000414558 GIFP27352 417 aa4.04□□□□□ -1.76
ATG4C-204ENST00000414558 KHKP50053 298 aa4.04□□□□□ -1.76
ATG4C-204ENST00000414558 SULT2A1Q06520 285 aa4.04□□□□□ -1.76
ATG4C-204ENST00000414558 AIMP1Q12904 312 aaKnown RBP4.04□□□□□ -1.76
ATG4C-204ENST00000414558 RNF212Q495C1 297 aa4.04□□□□□ -1.76
ATG4C-204ENST00000414558 SUSD4Q5VX71 490 aa4.04□□□□□ -1.76
ATG4C-204ENST00000414558 KRT80Q6KB66 452 aa4.04□□□□□ -1.76
ATG4C-204ENST00000414558 FUT10Q6P4F1 479 aa4.04□□□□□ -1.76
ATG4C-204ENST00000414558 PRSS35Q8N3Z0 413 aa4.04□□□□□ -1.76
ATG4C-204ENST00000414558 PI4KAP1Q8N8J0 262 aa4.04□□□□□ -1.76
ATG4C-204ENST00000414558 C4orf32Q8N8J7 132 aa4.04□□□□□ -1.76
ATG4C-204ENST00000414558 CSNK1G2-AS1Q8NCQ2 148 aa4.04□□□□□ -1.76
ATG4C-204ENST00000414558 SLC26A7Q8TE54 656 aa4.04□□□□□ -1.76
ATG4C-204ENST00000414558 EXT2Q93063 718 aa4.04□□□□□ -1.76
ATG4C-204ENST00000414558 GTPBP2Q9BX10 602 aaKnown RBP4.04□□□□□ -1.76
ATG4C-204ENST00000414558 RBM24Q9BX46 236 aaKnown RBP4.04□□□□□ -1.76
ATG4C-204ENST00000414558 POLLQ9UGP5 575 aa4.04□□□□□ -1.76
ATG4C-204ENST00000414558 POMT2Q9UKY4 750 aa4.04□□□□□ -1.76
ATG4C-204ENST00000414558 MRPS18CQ9Y3D5 142 aaKnown RBP4.04□□□□□ -1.76
ATG4C-204ENST00000414558 COLEC10Q9Y6Z7 277 aa4.04□□□□□ -1.76
ATG4C-204ENST00000414558 NEDD4P46934 1319 aa4.03□□□□□ -1.76
ATG4C-204ENST00000414558 A0A087WWV3 80 aa4.03□□□□□ -1.76
ATG4C-204ENST00000414558 GLTPD2A6NH11 291 aa4.03□□□□□ -1.76
ATG4C-204ENST00000414558 RTCAO00442 366 aaKnown RBP4.03□□□□□ -1.76
ATG4C-204ENST00000414558 MAGEB2O15479 319 aa4.03□□□□□ -1.76
ATG4C-204ENST00000414558 DUX4L4P0CJ87 422 aa4.03□□□□□ -1.76
ATG4C-204ENST00000414558 LMO2P25791 158 aa4.03□□□□□ -1.76
ATG4C-204ENST00000414558 HSPA4P34932 840 aa4.03□□□□□ -1.76
ATG4C-204ENST00000414558 C3AR1Q16581 482 aa4.03□□□□□ -1.76
ATG4C-204ENST00000414558 MACC1Q6ZN28 852 aa4.03□□□□□ -1.76
ATG4C-204ENST00000414558 ANKRD33Q7Z3H0 272 aa4.03□□□□□ -1.76
ATG4C-204ENST00000414558 OR5M9Q8NGP3 310 aa4.03□□□□□ -1.76
ATG4C-204ENST00000414558 P2RX5Q93086 422 aa4.03□□□□□ -1.76
ATG4C-204ENST00000414558 C11orf52Q96A22 123 aa4.03□□□□□ -1.76
ATG4C-204ENST00000414558 LURAP1Q96LR2 239 aa4.03□□□□□ -1.76
ATG4C-204ENST00000414558 HNRNPABQ99729 332 aaKnown RBP4.03□□□□□ -1.76
ATG4C-204ENST00000414558 FZD8Q9H461 694 aa4.03□□□□□ -1.76
ATG4C-204ENST00000414558 TNFSF12O43508 249 aa4.02□□□□□ -1.77
ATG4C-204ENST00000414558 ZNF354AO60765 605 aaPredicted RBP4.02□□□□□ -1.77
ATG4C-204ENST00000414558 FYNP06241 537 aa4.02□□□□□ -1.77
ATG4C-204ENST00000414558 ADRB2P07550 413 aa4.02□□□□□ -1.77
ATG4C-204ENST00000414558 AKR1B1P15121 316 aa4.02□□□□□ -1.77
ATG4C-204ENST00000414558 DUTP33316 252 aaKnown RBP4.02□□□□□ -1.77
ATG4C-204ENST00000414558 PRELPP51888 382 aa4.02□□□□□ -1.77
ATG4C-204ENST00000414558 RIDAP52758 137 aaKnown RBP4.02□□□□□ -1.77
ATG4C-204ENST00000414558 KRTAP13-3Q3SY46 172 aa4.02□□□□□ -1.77
ATG4C-204ENST00000414558 FAM174BQ3ZCQ3 159 aa4.02□□□□□ -1.77
ATG4C-204ENST00000414558 AGAP7PQ5VUJ5 663 aa4.02□□□□□ -1.77
ATG4C-204ENST00000414558 RNLSQ5VYX0 342 aa4.02□□□□□ -1.77
ATG4C-204ENST00000414558 TMUB2Q71RG4 321 aa4.02□□□□□ -1.77
ATG4C-204ENST00000414558 KCTD6Q8NC69 237 aa4.02□□□□□ -1.77
ATG4C-204ENST00000414558 RHOXF1Q8NHV9 184 aa4.02□□□□□ -1.77
ATG4C-204ENST00000414558 SSC4DQ8WTU2 575 aa4.02□□□□□ -1.77
ATG4C-204ENST00000414558 RBM41Q96IZ5 413 aaKnown RBP4.02□□□□□ -1.77
ATG4C-204ENST00000414558 RMDN2Q96LZ7 410 aa4.02□□□□□ -1.77
ATG4C-204ENST00000414558 GDAP1L1Q96MZ0 367 aa4.02□□□□□ -1.77
ATG4C-204ENST00000414558 SLF1Q9BQI6 1058 aa4.02□□□□□ -1.77
ATG4C-204ENST00000414558 CCDC28BQ9BUN5 200 aa4.02□□□□□ -1.77
ATG4C-204ENST00000414558 WDR35Q9P2L0 1181 aa4.02□□□□□ -1.77
ATG4C-204ENST00000414558 A0A1W2PPW3 197 aa4.01□□□□□ -1.77
ATG4C-204ENST00000414558 RECQL5O94762 991 aaPredicted RBP4.01□□□□□ -1.77
ATG4C-204ENST00000414558 ERCC2P18074 760 aa4.01□□□□□ -1.77
ATG4C-204ENST00000414558 PSMA3P25788 255 aa4.01□□□□□ -1.77
ATG4C-204ENST00000414558 ABCE1P61221 599 aaKnown RBP4.01□□□□□ -1.77
ATG4C-204ENST00000414558 MLF2Q15773 248 aaPredicted RBP4.01□□□□□ -1.77
ATG4C-204ENST00000414558 REG3GQ6UW15 175 aa4.01□□□□□ -1.77
ATG4C-204ENST00000414558 PRUNE1Q86TP1 453 aa4.01□□□□□ -1.77
ATG4C-204ENST00000414558 ZBED8Q8IZ13 594 aa4.01□□□□□ -1.77
ATG4C-204ENST00000414558 CCDC185Q8N715 623 aa4.01□□□□□ -1.77
ATG4C-204ENST00000414558 RTL3Q8N8U3 475 aaKnown RBP4.01□□□□□ -1.77
ATG4C-204ENST00000414558 PAPOLGQ9BWT3 736 aaKnown RBP4.01□□□□□ -1.77
ATG4C-204ENST00000414558 STRADBQ9C0K7 418 aa4.01□□□□□ -1.77
ATG4C-204ENST00000414558 IARS2Q9NSE4 1012 aaKnown RBP4.01□□□□□ -1.77
ATG4C-204ENST00000414558 ZNF581Q9P0T4 197 aa4.01□□□□□ -1.77
ATG4C-204ENST00000414558 PILRAQ9UKJ1 303 aa4.01□□□□□ -1.77
ATG4C-204ENST00000414558 PLCL2Q9UPR0 1127 aa4.01□□□□□ -1.77
ATG4C-204ENST00000414558 ACY1Q03154 408 aa4□□□□□ -1.77
ATG4C-204ENST00000414558 IL10RBQ08334 325 aa4□□□□□ -1.77
ATG4C-204ENST00000414558 GCKRQ14397 625 aa4□□□□□ -1.77
ATG4C-204ENST00000414558 SIX1Q15475 284 aaPredicted RBP4□□□□□ -1.77
ATG4C-204ENST00000414558 SPANXN4Q5MJ08 99 aa4□□□□□ -1.77
ATG4C-204ENST00000414558 C9orf66Q5T8R8 295 aa4□□□□□ -1.77
ATG4C-204ENST00000414558 NRARPQ7Z6K4 114 aa4□□□□□ -1.77
ATG4C-204ENST00000414558 PIGWQ7Z7B1 504 aa4□□□□□ -1.77
ATG4C-204ENST00000414558 CARM1Q86X55 608 aa4□□□□□ -1.77
ATG4C-204ENST00000414558 CAMKVQ8NCB2 501 aa4□□□□□ -1.77
ATG4C-204ENST00000414558 GRK7Q8WTQ7 553 aa4□□□□□ -1.77
ATG4C-204ENST00000414558 SLC25A23Q9BV35 468 aa4□□□□□ -1.77
ATG4C-204ENST00000414558 MOB1AQ9H8S9 216 aa4□□□□□ -1.77
ATG4C-204ENST00000414558 IL1RAPQ9NPH3 570 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms