RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 KLHL18O94889 574 aa10.61□□□□□ -0.71
RFFL-204ENST00000414419 BMP10O95393 424 aa10.61□□□□□ -0.71
RFFL-204ENST00000414419 ACSL3O95573 720 aa10.61□□□□□ -0.71
RFFL-204ENST00000414419 LTA4HP09960 611 aaKnown RBP10.61□□□□□ -0.71
RFFL-204ENST00000414419 C8orf89P0DMQ9 161 aa10.61□□□□□ -0.71
RFFL-204ENST00000414419 C1GALT1C1LP0DN25 315 aa10.61□□□□□ -0.71
RFFL-204ENST00000414419 SCTRP47872 440 aa10.61□□□□□ -0.71
RFFL-204ENST00000414419 HSPA7P48741 367 aa10.61□□□□□ -0.71
RFFL-204ENST00000414419 MLLT10P55197 1068 aa10.61□□□□□ -0.71
RFFL-204ENST00000414419 REEP5Q00765 189 aa10.61□□□□□ -0.71
RFFL-204ENST00000414419 EEF1A2Q05639 463 aaKnown RBP10.61□□□□□ -0.71
RFFL-204ENST00000414419 CDC16Q13042 620 aa10.61□□□□□ -0.71
RFFL-204ENST00000414419 OR4D1Q15615 310 aa10.61□□□□□ -0.71
RFFL-204ENST00000414419 C18orf21Q32NC0 220 aaPredicted RBP10.61□□□□□ -0.71
RFFL-204ENST00000414419 MROH9Q5TGP6 573 aa10.61□□□□□ -0.71
RFFL-204ENST00000414419 ATG9BQ674R7 924 aa10.61□□□□□ -0.71
RFFL-204ENST00000414419 JMJD6Q6NYC1 403 aaPredicted RBP10.61□□□□□ -0.71
RFFL-204ENST00000414419 PRSS41Q7RTY9 318 aa10.61□□□□□ -0.71
RFFL-204ENST00000414419 CCDC91Q7Z6B0 441 aa10.61□□□□□ -0.71
RFFL-204ENST00000414419 ATCAYQ86WG3 371 aa10.61□□□□□ -0.71
RFFL-204ENST00000414419 RELL1Q8IUW5 271 aa10.61□□□□□ -0.71
RFFL-204ENST00000414419 ZC3H7AQ8IWR0 971 aaKnown RBP10.61□□□□□ -0.71
RFFL-204ENST00000414419 SNX31Q8N9S9 440 aa10.61□□□□□ -0.71
RFFL-204ENST00000414419 TTLQ8NG68 377 aa10.61□□□□□ -0.71
RFFL-204ENST00000414419 NT5CQ8TCD5 201 aa10.61□□□□□ -0.71
RFFL-204ENST00000414419 PNPLA2Q96AD5 504 aa10.61□□□□□ -0.71
RFFL-204ENST00000414419 SPNS1Q9H2V7 528 aa10.61□□□□□ -0.71
RFFL-204ENST00000414419 ALG9Q9H6U8 611 aa10.61□□□□□ -0.71
RFFL-204ENST00000414419 ZNF160Q9HCG1 818 aa10.61□□□□□ -0.71
RFFL-204ENST00000414419 DNAJC11Q9NVH1 559 aa10.61□□□□□ -0.71
RFFL-204ENST00000414419 NINJ2Q9NZG7 142 aa10.61□□□□□ -0.71
RFFL-204ENST00000414419 GPRC5BQ9NZH0 403 aa10.61□□□□□ -0.71
RFFL-204ENST00000414419 MAP10Q9P2G4 905 aa10.61□□□□□ -0.71
RFFL-204ENST00000414419 C19orf25Q9UFG5 118 aaPredicted RBP10.61□□□□□ -0.71
RFFL-204ENST00000414419 BSNQ9UPA5 3926 aa10.6□□□□□ -0.71
RFFL-204ENST00000414419 MYO18BQ8IUG5 2567 aa10.6□□□□□ -0.71
RFFL-204ENST00000414419 ANKDD1BA6NHY2 528 aa10.6□□□□□ -0.71
RFFL-204ENST00000414419 SYCE1LA8MT33 242 aa10.6□□□□□ -0.71
RFFL-204ENST00000414419 SUPT3HB4E1H0 165 aa10.6□□□□□ -0.71
RFFL-204ENST00000414419 CCNT2O60583 730 aaKnown RBP10.6□□□□□ -0.71
RFFL-204ENST00000414419 RDH16O75452 317 aa10.6□□□□□ -0.71
RFFL-204ENST00000414419 SUPT3HO75486 399 aa10.6□□□□□ -0.71
RFFL-204ENST00000414419 INHBAP08476 426 aa10.6□□□□□ -0.71
RFFL-204ENST00000414419 CYC1P08574 325 aa10.6□□□□□ -0.71
RFFL-204ENST00000414419 ZNF888P0CJ79 500 aaPredicted RBP10.6□□□□□ -0.71
RFFL-204ENST00000414419 SLC35E2BP0CK96 405 aa10.6□□□□□ -0.71
RFFL-204ENST00000414419 COX6A1P12074 109 aa10.6□□□□□ -0.71
RFFL-204ENST00000414419 ALOX12P18054 663 aa10.6□□□□□ -0.71
RFFL-204ENST00000414419 TFEBP19484 476 aa10.6□□□□□ -0.71
RFFL-204ENST00000414419 IL10P22301 178 aa10.6□□□□□ -0.71
RFFL-204ENST00000414419 VARSP26640 1264 aaKnown RBP10.6□□□□□ -0.71
RFFL-204ENST00000414419 TYK2P29597 1187 aa10.6□□□□□ -0.71
RFFL-204ENST00000414419 HPDP32754 393 aaPredicted RBP10.6□□□□□ -0.71
RFFL-204ENST00000414419 GGT5P36269 586 aa10.6□□□□□ -0.71
RFFL-204ENST00000414419 HNF4AP41235 474 aa10.6□□□□□ -0.71
RFFL-204ENST00000414419 SLC6A12P48065 614 aa10.6□□□□□ -0.71
RFFL-204ENST00000414419 STXBP1P61764 594 aaKnown RBP10.6□□□□□ -0.71
RFFL-204ENST00000414419 AP2B1P63010 937 aa10.6□□□□□ -0.71
RFFL-204ENST00000414419 BMPR2Q13873 1038 aa10.6□□□□□ -0.71
RFFL-204ENST00000414419 IGFBP7Q16270 282 aa10.6□□□□□ -0.71
RFFL-204ENST00000414419 PDK4Q16654 411 aa10.6□□□□□ -0.71
RFFL-204ENST00000414419 HIST2H2ACQ16777 129 aaPredicted RBP10.6□□□□□ -0.71
RFFL-204ENST00000414419 FAM83EQ2M2I3 478 aa10.6□□□□□ -0.71
RFFL-204ENST00000414419 DEFB134Q4QY38 66 aa10.6□□□□□ -0.71
RFFL-204ENST00000414419 HIST2H2AA3Q6FI13 130 aa10.6□□□□□ -0.71
RFFL-204ENST00000414419 KLC3Q6P597 504 aa10.6□□□□□ -0.71
RFFL-204ENST00000414419 IGFL3Q6UXB1 125 aa10.6□□□□□ -0.71
RFFL-204ENST00000414419 TMIGD1Q6UXZ0 262 aa10.6□□□□□ -0.71
RFFL-204ENST00000414419 TAOK1Q7L7X3 1001 aa10.6□□□□□ -0.71
RFFL-204ENST00000414419 IFT20Q8IY31 132 aa10.6□□□□□ -0.71
RFFL-204ENST00000414419 KBTBD2Q8IY47 623 aa10.6□□□□□ -0.71
RFFL-204ENST00000414419 KLHDC8AQ8IYD2 350 aa10.6□□□□□ -0.71
RFFL-204ENST00000414419 RBMXL3Q8N7X1 1067 aaKnown RBP10.6□□□□□ -0.71
RFFL-204ENST00000414419 PDPRQ8NCN5 879 aa10.6□□□□□ -0.71
RFFL-204ENST00000414419 CPT1CQ8TCG5 803 aa10.6□□□□□ -0.71
RFFL-204ENST00000414419 CCT6BQ92526 530 aa10.6□□□□□ -0.71
RFFL-204ENST00000414419 ESAMQ96AP7 390 aa10.6□□□□□ -0.71
RFFL-204ENST00000414419 MOCOSQ96EN8 888 aa10.6□□□□□ -0.71
RFFL-204ENST00000414419 PEX11GQ96HA9 241 aa10.6□□□□□ -0.71
RFFL-204ENST00000414419 FAR2Q96K12 515 aa10.6□□□□□ -0.71
RFFL-204ENST00000414419 TMEM79Q9BSE2 394 aa10.6□□□□□ -0.71
RFFL-204ENST00000414419 PITHD1Q9GZP4 211 aaPredicted RBP10.6□□□□□ -0.71
RFFL-204ENST00000414419 ILKAPQ9H0C8 392 aaPredicted RBP10.6□□□□□ -0.71
RFFL-204ENST00000414419 CDC42EP4Q9H3Q1 356 aaKnown RBP10.6□□□□□ -0.71
RFFL-204ENST00000414419 ACSS3Q9H6R3 686 aa10.6□□□□□ -0.71
RFFL-204ENST00000414419 EPS8L2Q9H6S3 715 aa10.6□□□□□ -0.71
RFFL-204ENST00000414419 RIC8BQ9NVN3 520 aa10.6□□□□□ -0.71
RFFL-204ENST00000414419 NUDT4Q9NZJ9 180 aa10.6□□□□□ -0.71
RFFL-204ENST00000414419 PRRC2CQ9Y520 2896 aaKnown RBP10.59□□□□□ -0.71
RFFL-204ENST00000414419 IGHV1-45A0A0A0MS14 117 aa10.59□□□□□ -0.71
RFFL-204ENST00000414419 ZNF860A6NHJ4 632 aa10.59□□□□□ -0.71
RFFL-204ENST00000414419 TAPBPO15533 448 aa10.59□□□□□ -0.71
RFFL-204ENST00000414419 GALR3O60755 368 aaPredicted RBP10.59□□□□□ -0.71
RFFL-204ENST00000414419 KERAO60938 352 aa10.59□□□□□ -0.71
RFFL-204ENST00000414419 VPS4BO75351 444 aa10.59□□□□□ -0.71
RFFL-204ENST00000414419 JRKO75564 520 aa10.59□□□□□ -0.71
RFFL-204ENST00000414419 WFS1O76024 890 aa10.59□□□□□ -0.71
RFFL-204ENST00000414419 C2P06681 752 aa10.59□□□□□ -0.71
RFFL-204ENST00000414419 SERPINA6P08185 405 aa10.59□□□□□ -0.71
RFFL-204ENST00000414419 ICAM2P13598 275 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms