RNA–Protein interactions for RNA: ENST00000409627.6

SUMO1-208, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 3

Gene SUMO1, Length 722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-208ENST00000409627 ARSFP54793 590 aa15.84■□□□□ 0.13
SUMO1-208ENST00000409627 SHC2P98077 582 aa15.84■□□□□ 0.13
SUMO1-208ENST00000409627 ZNF33BQ06732 778 aa15.84■□□□□ 0.13
SUMO1-208ENST00000409627 HYAL2Q12891 473 aa15.84■□□□□ 0.13
SUMO1-208ENST00000409627 GARNL3Q5VVW2 1013 aa15.84■□□□□ 0.13
SUMO1-208ENST00000409627 KIRREL3Q8IZU9 778 aa15.84■□□□□ 0.13
SUMO1-208ENST00000409627 ARHGEF39Q8N4T4 335 aa15.84■□□□□ 0.13
SUMO1-208ENST00000409627 FAM76AQ8TAV0 307 aa15.84■□□□□ 0.13
SUMO1-208ENST00000409627 ZNF75CPQ92670 426 aaPredicted RBP15.84■□□□□ 0.13
SUMO1-208ENST00000409627 KCNA7Q96RP8 456 aa15.84■□□□□ 0.13
SUMO1-208ENST00000409627 SORT1Q99523 831 aa15.84■□□□□ 0.13
SUMO1-208ENST00000409627 MS4A8Q9BY19 250 aa15.84■□□□□ 0.13
SUMO1-208ENST00000409627 ASCL3Q9NQ33 180 aa15.84■□□□□ 0.13
SUMO1-208ENST00000409627 DMRT3Q9NQL9 472 aa15.84■□□□□ 0.13
SUMO1-208ENST00000409627 STARD5Q9NSY2 213 aa15.84■□□□□ 0.13
SUMO1-208ENST00000409627 THAP1Q9NVV9 213 aa15.84■□□□□ 0.13
SUMO1-208ENST00000409627 PSD3Q9NYI0 1048 aa15.84■□□□□ 0.13
SUMO1-208ENST00000409627 HAO1Q9UJM8 370 aa15.84■□□□□ 0.13
SUMO1-208ENST00000409627 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.84■□□□□ 0.13
SUMO1-208ENST00000409627 SPTBP11277 2137 aa15.83■□□□□ 0.13
SUMO1-208ENST00000409627 TRABD2BA6NFA1 517 aa15.83■□□□□ 0.12
SUMO1-208ENST00000409627 MANBAO00462 879 aa15.83■□□□□ 0.12
SUMO1-208ENST00000409627 ZNF749O43361 778 aa15.83■□□□□ 0.12
SUMO1-208ENST00000409627 CPNE3O75131 537 aaKnown RBP15.83■□□□□ 0.12
SUMO1-208ENST00000409627 TBX6O95947 436 aaPredicted RBP15.83■□□□□ 0.12
SUMO1-208ENST00000409627 STATHP02808 62 aa15.83■□□□□ 0.12
SUMO1-208ENST00000409627 SERPIND1P05546 499 aa15.83■□□□□ 0.12
SUMO1-208ENST00000409627 FOXA1P55317 472 aa15.83■□□□□ 0.12
SUMO1-208ENST00000409627 STXBP1P61764 594 aaKnown RBP15.83■□□□□ 0.12
SUMO1-208ENST00000409627 DDX39BQ13838 428 aaKnown RBP15.83■□□□□ 0.12
SUMO1-208ENST00000409627 NDUFA9Q16795 377 aa15.83■□□□□ 0.12
SUMO1-208ENST00000409627 MUM1Q2TAK8 710 aa15.83■□□□□ 0.12
SUMO1-208ENST00000409627 FAM214AQ32MH5 1076 aa15.83■□□□□ 0.12
SUMO1-208ENST00000409627 ADPRMQ3LIE5 342 aa15.83■□□□□ 0.12
SUMO1-208ENST00000409627 TCHHL1Q5QJ38 904 aaPredicted RBP15.83■□□□□ 0.12
SUMO1-208ENST00000409627 SH2D4BQ5SQS7 431 aa15.83■□□□□ 0.12
SUMO1-208ENST00000409627 PRAMEF17Q5VTA0 474 aa15.83■□□□□ 0.12
SUMO1-208ENST00000409627 KANK2Q63ZY3 851 aa15.83■□□□□ 0.12
SUMO1-208ENST00000409627 RHBDD2Q6NTF9 364 aa15.83■□□□□ 0.12
SUMO1-208ENST00000409627 TMEM214Q6NUQ4 689 aaKnown RBP15.83■□□□□ 0.12
SUMO1-208ENST00000409627 ERMP1Q7Z2K6 904 aa15.83■□□□□ 0.12
SUMO1-208ENST00000409627 KCT2Q8NC54 265 aa15.83■□□□□ 0.12
SUMO1-208ENST00000409627 LRRC8CQ8TDW0 803 aa15.83■□□□□ 0.12
SUMO1-208ENST00000409627 CKAP2Q8WWK9 683 aa15.83■□□□□ 0.12
SUMO1-208ENST00000409627 SELENOMQ8WWX9 145 aa15.83■□□□□ 0.12
SUMO1-208ENST00000409627 CCT6BQ92526 530 aa15.83■□□□□ 0.12
SUMO1-208ENST00000409627 C10orf90Q96M02 699 aa15.83■□□□□ 0.12
SUMO1-208ENST00000409627 MAGEB18Q96M61 343 aa15.83■□□□□ 0.12
SUMO1-208ENST00000409627 MTERF1Q99551 399 aaKnown RBP15.83■□□□□ 0.12
SUMO1-208ENST00000409627 MACROD1Q9BQ69 325 aa15.83■□□□□ 0.12
SUMO1-208ENST00000409627 NDC1Q9BTX1 674 aa15.83■□□□□ 0.12
SUMO1-208ENST00000409627 C20orf27Q9GZN8 174 aa15.83■□□□□ 0.12
SUMO1-208ENST00000409627 ZNF395Q9H8N7 513 aaPredicted RBP15.83■□□□□ 0.12
SUMO1-208ENST00000409627 ACTR5Q9H9F9 607 aaPredicted RBP15.83■□□□□ 0.12
SUMO1-208ENST00000409627 CUTCQ9NTM9 273 aa15.83■□□□□ 0.12
SUMO1-208ENST00000409627 FOXJ2Q9P0K8 574 aa15.83■□□□□ 0.12
SUMO1-208ENST00000409627 RAP2CQ9Y3L5 183 aa15.83■□□□□ 0.12
SUMO1-208ENST00000409627 TRAF6Q9Y4K3 522 aa15.83■□□□□ 0.12
SUMO1-208ENST00000409627 TIMM22Q9Y584 194 aa15.83■□□□□ 0.12
SUMO1-208ENST00000409627 SERTM1A2A2V5 107 aa15.82■□□□□ 0.12
SUMO1-208ENST00000409627 LRIT2A6NDA9 550 aa15.82■□□□□ 0.12
SUMO1-208ENST00000409627 URADA6NGE7 173 aa15.82■□□□□ 0.12
SUMO1-208ENST00000409627 MAGEB17A8MXT2 336 aa15.82■□□□□ 0.12
SUMO1-208ENST00000409627 BRINP1O60477 761 aa15.82■□□□□ 0.12
SUMO1-208ENST00000409627 ULK1O75385 1050 aa15.82■□□□□ 0.12
SUMO1-208ENST00000409627 PDYNP01213 254 aa15.82■□□□□ 0.12
SUMO1-208ENST00000409627 HSD3B1P14060 373 aa15.82■□□□□ 0.12
SUMO1-208ENST00000409627 HSD3B2P26439 372 aa15.82■□□□□ 0.12
SUMO1-208ENST00000409627 CD82P27701 267 aa15.82■□□□□ 0.12
SUMO1-208ENST00000409627 NEK2P51955 445 aa15.82■□□□□ 0.12
SUMO1-208ENST00000409627 OCRLQ01968 901 aa15.82■□□□□ 0.12
SUMO1-208ENST00000409627 FAM53BQ14153 422 aa15.82■□□□□ 0.12
SUMO1-208ENST00000409627 CLEC6AQ6EIG7 209 aa15.82■□□□□ 0.12
SUMO1-208ENST00000409627 RNF165Q6ZSG1 346 aa15.82■□□□□ 0.12
SUMO1-208ENST00000409627 CLYBLQ8N0X4 340 aa15.82■□□□□ 0.12
SUMO1-208ENST00000409627 RNF175Q8N4F7 328 aa15.82■□□□□ 0.12
SUMO1-208ENST00000409627 CMTM7Q96FZ5 175 aa15.82■□□□□ 0.12
SUMO1-208ENST00000409627 LRFN5Q96NI6 719 aa15.82■□□□□ 0.12
SUMO1-208ENST00000409627 ULBP3Q9BZM4 244 aa15.82■□□□□ 0.12
SUMO1-208ENST00000409627 SPRY4Q9C004 299 aa15.82■□□□□ 0.12
SUMO1-208ENST00000409627 ILKAPQ9H0C8 392 aaPredicted RBP15.82■□□□□ 0.12
SUMO1-208ENST00000409627 BRF2Q9HAW0 419 aa15.82■□□□□ 0.12
SUMO1-208ENST00000409627 THSD1Q9NS62 852 aa15.82■□□□□ 0.12
SUMO1-208ENST00000409627 ZDHHC2Q9UIJ5 367 aa15.82■□□□□ 0.12
SUMO1-208ENST00000409627 ACSL6Q9UKU0 697 aa15.82■□□□□ 0.12
SUMO1-208ENST00000409627 TMEM184BQ9Y519 407 aaPredicted RBP15.82■□□□□ 0.12
SUMO1-208ENST00000409627 SLC22A7Q9Y694 548 aa15.82■□□□□ 0.12
SUMO1-208ENST00000409627 AK5Q9Y6K8 562 aa15.82■□□□□ 0.12
SUMO1-208ENST00000409627 SDK2Q58EX2 2172 aa15.82■□□□□ 0.12
SUMO1-208ENST00000409627 FER1L5A0AVI2 2057 aa15.81■□□□□ 0.12
SUMO1-208ENST00000409627 DSCR3O14972 297 aa15.81■□□□□ 0.12
SUMO1-208ENST00000409627 STK17BO94768 372 aa15.81■□□□□ 0.12
SUMO1-208ENST00000409627 KIAA0754O94854 1291 aa15.81■□□□□ 0.12
SUMO1-208ENST00000409627 DLGAP3O95886 979 aa15.81■□□□□ 0.12
SUMO1-208ENST00000409627 ZNF28P17035 718 aa15.81■□□□□ 0.12
SUMO1-208ENST00000409627 PTX3P26022 381 aaPredicted RBP15.81■□□□□ 0.12
SUMO1-208ENST00000409627 SLC5A2P31639 672 aa15.81■□□□□ 0.12
SUMO1-208ENST00000409627 HNRNPH1P31943 449 aaKnown RBP15.81■□□□□ 0.12
SUMO1-208ENST00000409627 HTR6P50406 440 aa15.81■□□□□ 0.12
SUMO1-208ENST00000409627 RPS13P62277 151 aaKnown RBP15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms