RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 ASF1BQ9NVP2 202 aa8.59□□□□□ -1.03
SNORD88A-201ENST00000408314 WWOXQ9NZC7 414 aa8.59□□□□□ -1.03
SNORD88A-201ENST00000408314 GPRC5BQ9NZH0 403 aa8.59□□□□□ -1.03
SNORD88A-201ENST00000408314 HCN3Q9P1Z3 774 aa8.59□□□□□ -1.03
SNORD88A-201ENST00000408314 NAALAD2Q9Y3Q0 740 aa8.59□□□□□ -1.03
SNORD88A-201ENST00000408314 SPTAN1Q13813 2472 aaKnown RBP8.58□□□□□ -1.04
SNORD88A-201ENST00000408314 FEZF1A0PJY2 475 aa8.58□□□□□ -1.04
SNORD88A-201ENST00000408314 CCDC189A1A4V9 331 aa8.58□□□□□ -1.04
SNORD88A-201ENST00000408314 MAGEB17A8MXT2 336 aa8.58□□□□□ -1.04
SNORD88A-201ENST00000408314 SGK494L7N484 410 aa8.58□□□□□ -1.04
SNORD88A-201ENST00000408314 FFAR3O14843 346 aa8.58□□□□□ -1.04
SNORD88A-201ENST00000408314 CLGNO14967 610 aa8.58□□□□□ -1.04
SNORD88A-201ENST00000408314 GPR42O15529 346 aa8.58□□□□□ -1.04
SNORD88A-201ENST00000408314 RAD51CO43502 376 aa8.58□□□□□ -1.04
SNORD88A-201ENST00000408314 GALR3O60755 368 aaPredicted RBP8.58□□□□□ -1.04
SNORD88A-201ENST00000408314 RDH16O75452 317 aa8.58□□□□□ -1.04
SNORD88A-201ENST00000408314 MLYCDO95822 493 aa8.58□□□□□ -1.04
SNORD88A-201ENST00000408314 CRYABP02511 175 aaKnown RBP8.58□□□□□ -1.04
SNORD88A-201ENST00000408314 SERPINA6P08185 405 aa8.58□□□□□ -1.04
SNORD88A-201ENST00000408314 EDN3P14138 238 aa8.58□□□□□ -1.04
SNORD88A-201ENST00000408314 SOX11P35716 441 aa8.58□□□□□ -1.04
SNORD88A-201ENST00000408314 SCTRP47872 440 aa8.58□□□□□ -1.04
SNORD88A-201ENST00000408314 TAS2R39P59534 338 aa8.58□□□□□ -1.04
SNORD88A-201ENST00000408314 MAT1AQ00266 395 aaKnown RBP8.58□□□□□ -1.04
SNORD88A-201ENST00000408314 ACTN3Q08043 901 aaPredicted RBP8.58□□□□□ -1.04
SNORD88A-201ENST00000408314 TGM3Q08188 693 aa8.58□□□□□ -1.04
SNORD88A-201ENST00000408314 RCN2Q14257 317 aa8.58□□□□□ -1.04
SNORD88A-201ENST00000408314 USP10Q14694 798 aaKnown RBP8.58□□□□□ -1.04
SNORD88A-201ENST00000408314 FASTKD3Q14CZ7 662 aaKnown RBP8.58□□□□□ -1.04
SNORD88A-201ENST00000408314 PCOLCEQ15113 449 aa8.58□□□□□ -1.04
SNORD88A-201ENST00000408314 TSNQ15631 228 aaKnown RBP8.58□□□□□ -1.04
SNORD88A-201ENST00000408314 SYT16Q17RD7 645 aa8.58□□□□□ -1.04
SNORD88A-201ENST00000408314 BTBD16Q32M84 506 aa8.58□□□□□ -1.04
SNORD88A-201ENST00000408314 PRR30Q53SZ7 412 aaPredicted RBP8.58□□□□□ -1.04
SNORD88A-201ENST00000408314 PAGE2BQ5JRK9 111 aa8.58□□□□□ -1.04
SNORD88A-201ENST00000408314 NXPE4Q6UWF7 544 aa8.58□□□□□ -1.04
SNORD88A-201ENST00000408314 CAPN12Q6ZSI9 719 aa8.58□□□□□ -1.04
SNORD88A-201ENST00000408314 LAPTM4BQ86VI4 370 aa8.58□□□□□ -1.04
SNORD88A-201ENST00000408314 CTAGE3PQ8IX95 158 aa8.58□□□□□ -1.04
SNORD88A-201ENST00000408314 KLHDC8AQ8IYD2 350 aa8.58□□□□□ -1.04
SNORD88A-201ENST00000408314 LGI4Q8N135 537 aa8.58□□□□□ -1.04
SNORD88A-201ENST00000408314 AFAP1L2Q8N4X5 818 aa8.58□□□□□ -1.04
SNORD88A-201ENST00000408314 SLC5A8Q8N695 610 aa8.58□□□□□ -1.04
SNORD88A-201ENST00000408314 HORMAD2Q8N7B1 307 aa8.58□□□□□ -1.04
SNORD88A-201ENST00000408314 KCT2Q8NC54 265 aa8.58□□□□□ -1.04
SNORD88A-201ENST00000408314 C7orf57Q8NEG2 295 aa8.58□□□□□ -1.04
SNORD88A-201ENST00000408314 HAS2Q92819 552 aa8.58□□□□□ -1.04
SNORD88A-201ENST00000408314 NEIL2Q969S2 332 aa8.58□□□□□ -1.04
SNORD88A-201ENST00000408314 TBC1D20Q96BZ9 403 aa8.58□□□□□ -1.04
SNORD88A-201ENST00000408314 FAR2Q96K12 515 aa8.58□□□□□ -1.04
SNORD88A-201ENST00000408314 ZNF354BQ96LW1 612 aa8.58□□□□□ -1.04
SNORD88A-201ENST00000408314 TSNARE1Q96NA8 513 aa8.58□□□□□ -1.04
SNORD88A-201ENST00000408314 CYTH2Q99418 400 aa8.58□□□□□ -1.04
SNORD88A-201ENST00000408314 GPR22Q99680 433 aa8.58□□□□□ -1.04
SNORD88A-201ENST00000408314 RBBP8Q99708 897 aa8.58□□□□□ -1.04
SNORD88A-201ENST00000408314 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.58□□□□□ -1.04
SNORD88A-201ENST00000408314 TSPYL1Q9H0U9 437 aa8.58□□□□□ -1.04
SNORD88A-201ENST00000408314 EHD1Q9H4M9 534 aa8.58□□□□□ -1.04
SNORD88A-201ENST00000408314 PTGFRNQ9P2B2 879 aa8.58□□□□□ -1.04
SNORD88A-201ENST00000408314 SH2B3Q9UQQ2 575 aa8.58□□□□□ -1.04
SNORD88A-201ENST00000408314 MRPS33Q9Y291 106 aaKnown RBP8.58□□□□□ -1.04
SNORD88A-201ENST00000408314 PSAT1Q9Y617 370 aa8.58□□□□□ -1.04
SNORD88A-201ENST00000408314 SPTBN1Q01082 2364 aaKnown RBP8.58□□□□□ -1.04
SNORD88A-201ENST00000408314 CNTRLQ7Z7A1 2325 aa8.58□□□□□ -1.04
SNORD88A-201ENST00000408314 SHANK1Q9Y566 2161 aa8.58□□□□□ -1.04
SNORD88A-201ENST00000408314 USP9XQ93008 2570 aaPredicted RBP8.57□□□□□ -1.04
SNORD88A-201ENST00000408314 DOCK10Q96BY6 2186 aa8.57□□□□□ -1.04
SNORD88A-201ENST00000408314 TCRBV9S1A1TA0A576 114 aa8.57□□□□□ -1.04
SNORD88A-201ENST00000408314 BLACEA4D250 179 aa8.57□□□□□ -1.04
SNORD88A-201ENST00000408314 OR5H15A6NDH6 313 aa8.57□□□□□ -1.04
SNORD88A-201ENST00000408314 FAM159BA6NKW6 160 aa8.57□□□□□ -1.04
SNORD88A-201ENST00000408314 MASP2O00187 686 aa8.57□□□□□ -1.04
SNORD88A-201ENST00000408314 CDC7O00311 574 aa8.57□□□□□ -1.04
SNORD88A-201ENST00000408314 TP73O15350 636 aa8.57□□□□□ -1.04
SNORD88A-201ENST00000408314 LCMT2O60294 686 aaKnown RBP8.57□□□□□ -1.04
SNORD88A-201ENST00000408314 WDR47O94967 919 aa8.57□□□□□ -1.04
SNORD88A-201ENST00000408314 STATHP02808 62 aa8.57□□□□□ -1.04
SNORD88A-201ENST00000408314 FHP07954 510 aa8.57□□□□□ -1.04
SNORD88A-201ENST00000408314 RNH1P13489 461 aaKnown RBP8.57□□□□□ -1.04
SNORD88A-201ENST00000408314 SSTR1P30872 391 aa8.57□□□□□ -1.04
SNORD88A-201ENST00000408314 PHBP35232 272 aa8.57□□□□□ -1.04
SNORD88A-201ENST00000408314 TNFSF10P50591 281 aa8.57□□□□□ -1.04
SNORD88A-201ENST00000408314 PLTPP55058 493 aa8.57□□□□□ -1.04
SNORD88A-201ENST00000408314 RAB10P61026 200 aa8.57□□□□□ -1.04
SNORD88A-201ENST00000408314 ZNF33BQ06732 778 aa8.57□□□□□ -1.04
SNORD88A-201ENST00000408314 C2orf54Q08AI8 447 aa8.57□□□□□ -1.04
SNORD88A-201ENST00000408314 Q0VFX4 171 aa8.57□□□□□ -1.04
SNORD88A-201ENST00000408314 LAPTM5Q13571 262 aa8.57□□□□□ -1.04
SNORD88A-201ENST00000408314 ABRAXAS2Q15018 415 aa8.57□□□□□ -1.04
SNORD88A-201ENST00000408314 RBBP5Q15291 538 aaKnown RBP8.57□□□□□ -1.04
SNORD88A-201ENST00000408314 NSDHLQ15738 373 aa8.57□□□□□ -1.04
SNORD88A-201ENST00000408314 MEP1AQ16819 746 aa8.57□□□□□ -1.04
SNORD88A-201ENST00000408314 DEFB134Q4QY38 66 aa8.57□□□□□ -1.04
SNORD88A-201ENST00000408314 GRTP1Q5TC63 336 aa8.57□□□□□ -1.04
SNORD88A-201ENST00000408314 SULT1C3Q6IMI6 304 aa8.57□□□□□ -1.04
SNORD88A-201ENST00000408314 C8orf74Q6P047 294 aa8.57□□□□□ -1.04
SNORD88A-201ENST00000408314 SYT10Q6XYQ8 523 aa8.57□□□□□ -1.04
SNORD88A-201ENST00000408314 QSOX2Q6ZRP7 698 aa8.57□□□□□ -1.04
SNORD88A-201ENST00000408314 C3orf62Q6ZUJ4 267 aa8.57□□□□□ -1.04
SNORD88A-201ENST00000408314 ANKRD37Q7Z713 158 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms