RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 CHERPQ8IWX8 916 aaKnown RBP12.44□□□□□ -0.42
SMARCB1-203ENST00000407082 TRIML2Q8N7C3 387 aa12.44□□□□□ -0.42
SMARCB1-203ENST00000407082 OR2T12Q8NG77 320 aa12.44□□□□□ -0.42
SMARCB1-203ENST00000407082 CXorf40AQ8TE69 158 aa12.44□□□□□ -0.42
SMARCB1-203ENST00000407082 TESCQ96BS2 214 aa12.44□□□□□ -0.42
SMARCB1-203ENST00000407082 BIRC7Q96CA5 298 aa12.44□□□□□ -0.42
SMARCB1-203ENST00000407082 ZNF514Q96K75 400 aaPredicted RBP12.44□□□□□ -0.42
SMARCB1-203ENST00000407082 OR52E6Q96RD3 313 aa12.44□□□□□ -0.42
SMARCB1-203ENST00000407082 THUMPD3Q9BV44 507 aaKnown RBP12.44□□□□□ -0.42
SMARCB1-203ENST00000407082 TRIM4Q9C037 500 aa12.44□□□□□ -0.42
SMARCB1-203ENST00000407082 CLK4Q9HAZ1 481 aaKnown RBP12.44□□□□□ -0.42
SMARCB1-203ENST00000407082 PAPOLBQ9NRJ5 636 aaKnown RBP12.44□□□□□ -0.42
SMARCB1-203ENST00000407082 GPRC5BQ9NZH0 403 aa12.44□□□□□ -0.42
SMARCB1-203ENST00000407082 MAN2B2Q9Y2E5 1009 aa12.44□□□□□ -0.42
SMARCB1-203ENST00000407082 SLCO1B1Q9Y6L6 691 aa12.44□□□□□ -0.42
SMARCB1-203ENST00000407082 PLXNA2O75051 1894 aa12.43□□□□□ -0.42
SMARCB1-203ENST00000407082 A0A096LPI6 279 aa12.43□□□□□ -0.42
SMARCB1-203ENST00000407082 A0A1W2PQU0 124 aa12.43□□□□□ -0.42
SMARCB1-203ENST00000407082 ELOVL7A1L3X0 281 aa12.43□□□□□ -0.42
SMARCB1-203ENST00000407082 EVPLLA8MZ36 301 aa12.43□□□□□ -0.42
SMARCB1-203ENST00000407082 FAM220BPB1ANY3 271 aa12.43□□□□□ -0.42
SMARCB1-203ENST00000407082 H0Y8X5 98 aa12.43□□□□□ -0.42
SMARCB1-203ENST00000407082 H0YAE9 185 aa12.43□□□□□ -0.42
SMARCB1-203ENST00000407082 FFAR3O14843 346 aa12.43□□□□□ -0.42
SMARCB1-203ENST00000407082 WNT9AO14904 365 aa12.43□□□□□ -0.42
SMARCB1-203ENST00000407082 GPR42O15529 346 aa12.43□□□□□ -0.42
SMARCB1-203ENST00000407082 MMP20O60882 483 aa12.43□□□□□ -0.42
SMARCB1-203ENST00000407082 RECQL5O94762 991 aaPredicted RBP12.43□□□□□ -0.42
SMARCB1-203ENST00000407082 PDYNP01213 254 aa12.43□□□□□ -0.42
SMARCB1-203ENST00000407082 ELFN1P0C7U0 828 aa12.43□□□□□ -0.42
SMARCB1-203ENST00000407082 PRPS1L1P21108 318 aa12.43□□□□□ -0.42
SMARCB1-203ENST00000407082 MAT2AP31153 395 aaKnown RBP12.43□□□□□ -0.42
SMARCB1-203ENST00000407082 MMP12P39900 470 aa12.43□□□□□ -0.42
SMARCB1-203ENST00000407082 HALP42357 657 aa12.43□□□□□ -0.42
SMARCB1-203ENST00000407082 GDF5P43026 501 aa12.43□□□□□ -0.42
SMARCB1-203ENST00000407082 ASMTP46597 345 aa12.43□□□□□ -0.42
SMARCB1-203ENST00000407082 TRPC1P48995 793 aa12.43□□□□□ -0.42
SMARCB1-203ENST00000407082 ESRRGP62508 458 aa12.43□□□□□ -0.42
SMARCB1-203ENST00000407082 RPS21P63220 83 aaKnown RBP12.43□□□□□ -0.42
SMARCB1-203ENST00000407082 IRF8Q02556 426 aa12.43□□□□□ -0.42
SMARCB1-203ENST00000407082 MERTKQ12866 999 aa12.43□□□□□ -0.42
SMARCB1-203ENST00000407082 GTF2H3Q13889 308 aa12.43□□□□□ -0.42
SMARCB1-203ENST00000407082 MYBPC3Q14896 1274 aa12.43□□□□□ -0.42
SMARCB1-203ENST00000407082 KIAA0040Q15053 153 aa12.43□□□□□ -0.42
SMARCB1-203ENST00000407082 INAVAQ3KP66 663 aa12.43□□□□□ -0.42
SMARCB1-203ENST00000407082 TMEM52BQ4KMG9 183 aa12.43□□□□□ -0.42
SMARCB1-203ENST00000407082 RUNDC3AQ59EK9 446 aa12.43□□□□□ -0.42
SMARCB1-203ENST00000407082 RABL3Q5HYI8 236 aa12.43□□□□□ -0.42
SMARCB1-203ENST00000407082 PRAMEF14Q5SWL7 426 aa12.43□□□□□ -0.42
SMARCB1-203ENST00000407082 HENMT1Q5T8I9 393 aaKnown RBP12.43□□□□□ -0.42
SMARCB1-203ENST00000407082 FRG2Q64ET8 278 aa12.43□□□□□ -0.42
SMARCB1-203ENST00000407082 KIAA0895LQ68EN5 471 aa12.43□□□□□ -0.42
SMARCB1-203ENST00000407082 KIAA1161Q6NSJ0 714 aa12.43□□□□□ -0.42
SMARCB1-203ENST00000407082 NLRP8Q86W28 1048 aa12.43□□□□□ -0.42
SMARCB1-203ENST00000407082 HORMAD1Q86X24 394 aa12.43□□□□□ -0.42
SMARCB1-203ENST00000407082 CARM1Q86X55 608 aa12.43□□□□□ -0.42
SMARCB1-203ENST00000407082 SVOPLQ8N434 492 aa12.43□□□□□ -0.42
SMARCB1-203ENST00000407082 DHRSXQ8N5I4 330 aa12.43□□□□□ -0.42
SMARCB1-203ENST00000407082 GTF2H4Q92759 462 aa12.43□□□□□ -0.42
SMARCB1-203ENST00000407082 GLYATL1Q969I3 302 aa12.43□□□□□ -0.42
SMARCB1-203ENST00000407082 RMND5BQ96G75 393 aaPredicted RBP12.43□□□□□ -0.42
SMARCB1-203ENST00000407082 FRG2BQ96QU4 278 aa12.43□□□□□ -0.42
SMARCB1-203ENST00000407082 WRAP53Q9BUR4 548 aaKnown RBP12.43□□□□□ -0.42
SMARCB1-203ENST00000407082 PCED1AQ9H1Q7 454 aa12.43□□□□□ -0.42
SMARCB1-203ENST00000407082 MAGIXQ9H6Y5 334 aa12.43□□□□□ -0.42
SMARCB1-203ENST00000407082 BRF2Q9HAW0 419 aa12.43□□□□□ -0.42
SMARCB1-203ENST00000407082 ZFR2Q9UPR6 939 aaKnown RBP12.43□□□□□ -0.42
SMARCB1-203ENST00000407082 DMTF1Q9Y222 760 aa12.43□□□□□ -0.42
SMARCB1-203ENST00000407082 RUVBL1Q9Y265 456 aaKnown RBP12.43□□□□□ -0.42
SMARCB1-203ENST00000407082 AP1M2Q9Y6Q5 423 aa12.43□□□□□ -0.42
SMARCB1-203ENST00000407082 ZFC3H1O60293 1989 aaKnown RBP12.43□□□□□ -0.42
SMARCB1-203ENST00000407082 A0A087WXM4 84 aa12.42□□□□□ -0.42
SMARCB1-203ENST00000407082 IGLON5A6NGN9 336 aa12.42□□□□□ -0.42
SMARCB1-203ENST00000407082 C9JVG2 144 aa12.42□□□□□ -0.42
SMARCB1-203ENST00000407082 CLOCKO15516 846 aa12.42□□□□□ -0.42
SMARCB1-203ENST00000407082 PSIP1O75475 530 aaKnown RBP12.42□□□□□ -0.42
SMARCB1-203ENST00000407082 HPRP00739 348 aa12.42□□□□□ -0.42
SMARCB1-203ENST00000407082 BCKDHAP12694 445 aa12.42□□□□□ -0.42
SMARCB1-203ENST00000407082 PPIBP23284 216 aaKnown RBP12.42□□□□□ -0.42
SMARCB1-203ENST00000407082 MYF6P23409 242 aa12.42□□□□□ -0.42
SMARCB1-203ENST00000407082 TTKP33981 857 aa12.42□□□□□ -0.42
SMARCB1-203ENST00000407082 CA5AP35218 305 aa12.42□□□□□ -0.42
SMARCB1-203ENST00000407082 PRLHRP49683 370 aa12.42□□□□□ -0.42
SMARCB1-203ENST00000407082 CCR5P51681 352 aa12.42□□□□□ -0.42
SMARCB1-203ENST00000407082 PPP2CBP62714 309 aa12.42□□□□□ -0.42
SMARCB1-203ENST00000407082 PPP2CAP67775 309 aa12.42□□□□□ -0.42
SMARCB1-203ENST00000407082 ROR2Q01974 943 aaKnown RBP12.42□□□□□ -0.42
SMARCB1-203ENST00000407082 SGCGQ13326 291 aa12.42□□□□□ -0.42
SMARCB1-203ENST00000407082 BIRC2Q13490 618 aa12.42□□□□□ -0.42
SMARCB1-203ENST00000407082 ACOX1Q15067 660 aa12.42□□□□□ -0.42
SMARCB1-203ENST00000407082 CPSF6Q16630 551 aaKnown RBP eCLIP12.42□□□□□ -0.42
SMARCB1-203ENST00000407082 PTCHD3Q3KNS1 767 aa12.42□□□□□ -0.42
SMARCB1-203ENST00000407082 FAM174BQ3ZCQ3 159 aa12.42□□□□□ -0.42
SMARCB1-203ENST00000407082 KCTD21Q4G0X4 260 aa12.42□□□□□ -0.42
SMARCB1-203ENST00000407082 SGO1Q5FBB7 561 aa12.42□□□□□ -0.42
SMARCB1-203ENST00000407082 NHSL2Q5HYW2 709 aa12.42□□□□□ -0.42
SMARCB1-203ENST00000407082 LRIF1Q5T3J3 769 aa12.42□□□□□ -0.42
SMARCB1-203ENST00000407082 ERICH5Q6P6B1 374 aa12.42□□□□□ -0.42
SMARCB1-203ENST00000407082 IYDQ6PHW0 289 aa12.42□□□□□ -0.42
SMARCB1-203ENST00000407082 LIPIQ6XZB0 460 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms