RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 ZBTB20Q9HC78 741 aaPredicted RBP9.47□□□□□ -0.89
MSH2-202ENST00000406134 RASSF1Q9NS23 344 aa9.47□□□□□ -0.89
MSH2-202ENST00000406134 WARS2Q9UGM6 360 aaKnown RBP9.47□□□□□ -0.89
MSH2-202ENST00000406134 SAMHD1Q9Y3Z3 626 aaKnown RBP9.47□□□□□ -0.89
MSH2-202ENST00000406134 MYO1GB0I1T2 1018 aa9.47□□□□□ -0.89
MSH2-202ENST00000406134 SH3BGRLO75368 114 aa9.47□□□□□ -0.89
MSH2-202ENST00000406134 EPN2O95208 641 aa9.47□□□□□ -0.89
MSH2-202ENST00000406134 PARNO95453 639 aaKnown RBP9.47□□□□□ -0.89
MSH2-202ENST00000406134 C9P02748 559 aa9.47□□□□□ -0.89
MSH2-202ENST00000406134 RRM2P31350 389 aa9.47□□□□□ -0.89
MSH2-202ENST00000406134 PRLHRP49683 370 aa9.47□□□□□ -0.89
MSH2-202ENST00000406134 ZNF33BQ06732 778 aa9.47□□□□□ -0.89
MSH2-202ENST00000406134 MESP2Q0VG99 397 aa9.47□□□□□ -0.89
MSH2-202ENST00000406134 KCNC3Q14003 757 aa9.47□□□□□ -0.89
MSH2-202ENST00000406134 XKR6Q5GH73 641 aa9.47□□□□□ -0.89
MSH2-202ENST00000406134 DSG4Q86SJ6 1040 aa9.47□□□□□ -0.89
MSH2-202ENST00000406134 VN1R2Q8NFZ6 395 aa9.47□□□□□ -0.89
MSH2-202ENST00000406134 CIDECQ96AQ7 238 aaPredicted RBP9.47□□□□□ -0.89
MSH2-202ENST00000406134 PSD2Q9BQI7 771 aa9.47□□□□□ -0.89
MSH2-202ENST00000406134 CCDC90BQ9GZT6 254 aa9.47□□□□□ -0.89
MSH2-202ENST00000406134 NXF2Q9GZY0 626 aaKnown RBP9.47□□□□□ -0.89
MSH2-202ENST00000406134 PSORS1C1Q9UIG5 152 aa9.47□□□□□ -0.89
MSH2-202ENST00000406134 SNRNP200O75643 2136 aaKnown RBP9.47□□□□□ -0.89
MSH2-202ENST00000406134 J3KTA2 159 aa9.46□□□□□ -0.89
MSH2-202ENST00000406134 LEFTY1O75610 366 aa9.46□□□□□ -0.89
MSH2-202ENST00000406134 CPSF4O95639 269 aaKnown RBP9.46□□□□□ -0.89
MSH2-202ENST00000406134 POP4O95707 220 aaKnown RBP9.46□□□□□ -0.89
MSH2-202ENST00000406134 CYP2A7P20853 494 aa9.46□□□□□ -0.89
MSH2-202ENST00000406134 AQP1P29972 269 aa9.46□□□□□ -0.89
MSH2-202ENST00000406134 MC1RQ01726 317 aa9.46□□□□□ -0.89
MSH2-202ENST00000406134 IRF3Q14653 427 aa9.46□□□□□ -0.89
MSH2-202ENST00000406134 RGS21Q2M5E4 152 aa9.46□□□□□ -0.89
MSH2-202ENST00000406134 NLRP8Q86W28 1048 aa9.46□□□□□ -0.89
MSH2-202ENST00000406134 NPAS3Q8IXF0 933 aa9.46□□□□□ -0.89
MSH2-202ENST00000406134 CADM3Q8N126 398 aa9.46□□□□□ -0.89
MSH2-202ENST00000406134 WDR34Q96EX3 536 aa9.46□□□□□ -0.89
MSH2-202ENST00000406134 ASIC4Q96FT7 647 aa9.46□□□□□ -0.89
MSH2-202ENST00000406134 ZNF558Q96NG5 402 aa9.46□□□□□ -0.89
MSH2-202ENST00000406134 KCNC2Q96PR1 638 aa9.46□□□□□ -0.89
MSH2-202ENST00000406134 RIOK2Q9BVS4 552 aaKnown RBP9.46□□□□□ -0.89
MSH2-202ENST00000406134 RNF167Q9H6Y7 350 aa9.46□□□□□ -0.89
MSH2-202ENST00000406134 KRT84Q9NSB2 600 aa9.46□□□□□ -0.89
MSH2-202ENST00000406134 QPCTLQ9NXS2 382 aa9.46□□□□□ -0.89
MSH2-202ENST00000406134 RUVBL1Q9Y265 456 aaKnown RBP9.46□□□□□ -0.89
MSH2-202ENST00000406134 NINQ8N4C6 2090 aa9.46□□□□□ -0.89
MSH2-202ENST00000406134 HEATR5BQ9P2D3 2071 aa9.46□□□□□ -0.89
MSH2-202ENST00000406134 CLDN24A6NM45 220 aa9.46□□□□□ -0.89
MSH2-202ENST00000406134 NOL3O60936 208 aaKnown RBP9.46□□□□□ -0.89
MSH2-202ENST00000406134 ETFAP13804 333 aa9.46□□□□□ -0.89
MSH2-202ENST00000406134 VIPR1P32241 457 aa9.46□□□□□ -0.89
MSH2-202ENST00000406134 ERICH5Q6P6B1 374 aa9.46□□□□□ -0.89
MSH2-202ENST00000406134 WDR53Q7Z5U6 358 aaPredicted RBP9.46□□□□□ -0.89
MSH2-202ENST00000406134 P2RY8Q86VZ1 359 aa9.46□□□□□ -0.89
MSH2-202ENST00000406134 ZBTB8BQ8NAP8 495 aaPredicted RBP9.46□□□□□ -0.89
MSH2-202ENST00000406134 SETD9Q8NE22 299 aa9.46□□□□□ -0.89
MSH2-202ENST00000406134 PROX1Q92786 737 aa9.46□□□□□ -0.89
MSH2-202ENST00000406134 POP5Q969H6 163 aaKnown RBP9.46□□□□□ -0.89
MSH2-202ENST00000406134 VPS35Q96QK1 796 aa9.46□□□□□ -0.89
MSH2-202ENST00000406134 LINC00597Q9H2U6 94 aa9.46□□□□□ -0.89
MSH2-202ENST00000406134 TRNAU1APQ9NX07 287 aaKnown RBP9.46□□□□□ -0.89
MSH2-202ENST00000406134 ATP6V1HQ9UI12 483 aa9.46□□□□□ -0.89
MSH2-202ENST00000406134 RPS6KA6Q9UK32 745 aa9.46□□□□□ -0.89
MSH2-202ENST00000406134 LSM7Q9UK45 103 aaKnown RBP9.46□□□□□ -0.89
MSH2-202ENST00000406134 TBX21Q9UL17 535 aa9.46□□□□□ -0.89
MSH2-202ENST00000406134 ITM2BQ9Y287 266 aa9.46□□□□□ -0.89
MSH2-202ENST00000406134 M0R129 80 aa9.46□□□□□ -0.9
MSH2-202ENST00000406134 RNASET2O00584 256 aaKnown RBP9.46□□□□□ -0.9
MSH2-202ENST00000406134 OPN1SWP03999 348 aa9.46□□□□□ -0.9
MSH2-202ENST00000406134 GGT2P36268 569 aa9.46□□□□□ -0.9
MSH2-202ENST00000406134 TPD52P55327 224 aaPredicted RBP9.46□□□□□ -0.9
MSH2-202ENST00000406134 PCBP3P57721 371 aaKnown RBP9.46□□□□□ -0.9
MSH2-202ENST00000406134 RPS13P62277 151 aaKnown RBP9.46□□□□□ -0.9
MSH2-202ENST00000406134 SELENOWP63302 87 aa9.46□□□□□ -0.9
MSH2-202ENST00000406134 IRF8Q02556 426 aa9.46□□□□□ -0.9
MSH2-202ENST00000406134 DGCR6Q14129 220 aa9.46□□□□□ -0.9
MSH2-202ENST00000406134 ZNF846Q147U1 533 aa9.46□□□□□ -0.9
MSH2-202ENST00000406134 MAPK11Q15759 364 aa9.46□□□□□ -0.9
MSH2-202ENST00000406134 SOWAHCQ53LP3 525 aaPredicted RBP9.46□□□□□ -0.9
MSH2-202ENST00000406134 DNAJC22Q8N4W6 341 aa9.46□□□□□ -0.9
MSH2-202ENST00000406134 TRAM1L1Q8N609 369 aa9.46□□□□□ -0.9
MSH2-202ENST00000406134 TMCO5AQ8N6Q1 288 aa9.46□□□□□ -0.9
MSH2-202ENST00000406134 SLAIN1Q8ND83 568 aa9.46□□□□□ -0.9
MSH2-202ENST00000406134 ZNF540Q8NDQ6 660 aa9.46□□□□□ -0.9
MSH2-202ENST00000406134 WDR48Q8TAF3 677 aa9.46□□□□□ -0.9
MSH2-202ENST00000406134 DOHHQ9BU89 302 aa9.46□□□□□ -0.9
MSH2-202ENST00000406134 SPATA9Q9BWV2 254 aa9.46□□□□□ -0.9
MSH2-202ENST00000406134 EPS8L2Q9H6S3 715 aa9.46□□□□□ -0.9
MSH2-202ENST00000406134 C1GALT1Q9NS00 363 aa9.46□□□□□ -0.9
MSH2-202ENST00000406134 RAD18Q9NS91 495 aa9.46□□□□□ -0.9
MSH2-202ENST00000406134 PLCXD1Q9NUJ7 323 aa9.46□□□□□ -0.9
MSH2-202ENST00000406134 SCHIP1Q9P0W5 487 aaPredicted RBP9.46□□□□□ -0.9
MSH2-202ENST00000406134 ACSL6Q9UKU0 697 aa9.46□□□□□ -0.9
MSH2-202ENST00000406134 SNX5Q9Y5X3 404 aa9.46□□□□□ -0.9
MSH2-202ENST00000406134 CFAP20Q9Y6A4 193 aaKnown RBP9.46□□□□□ -0.9
MSH2-202ENST00000406134 K7ESM1 405 aa9.45□□□□□ -0.9
MSH2-202ENST00000406134 GRM6O15303 877 aa9.45□□□□□ -0.9
MSH2-202ENST00000406134 RGS10O43665 173 aa9.45□□□□□ -0.9
MSH2-202ENST00000406134 MRPS14O60783 128 aaKnown RBP9.45□□□□□ -0.9
MSH2-202ENST00000406134 AP2A2O94973 939 aa9.45□□□□□ -0.9
MSH2-202ENST00000406134 GBAP04062 536 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms