RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 GRHL2Q6ISB3 625 aa13.52□□□□□ -0.25
SCAF4-202ENST00000399804 B3GNT6Q6ZMB0 384 aa13.52□□□□□ -0.25
SCAF4-202ENST00000399804 COMMD6Q7Z4G1 85 aa13.52□□□□□ -0.25
SCAF4-202ENST00000399804 OXR1Q8N573 874 aa13.52□□□□□ -0.25
SCAF4-202ENST00000399804 VN1R2Q8NFZ6 395 aa13.52□□□□□ -0.25
SCAF4-202ENST00000399804 OR2T11Q8NH01 316 aa13.52□□□□□ -0.25
SCAF4-202ENST00000399804 GPR174Q9BXC1 333 aa13.52□□□□□ -0.25
SCAF4-202ENST00000399804 ADAP2Q9NPF8 381 aa13.52□□□□□ -0.25
SCAF4-202ENST00000399804 FADS2P1A8MWK0 482 aa13.51□□□□□ -0.25
SCAF4-202ENST00000399804 ZBTB11O95625 1053 aaPredicted RBP13.51□□□□□ -0.25
SCAF4-202ENST00000399804 CD160O95971 181 aa13.51□□□□□ -0.25
SCAF4-202ENST00000399804 ALAS2P22557 587 aa13.51□□□□□ -0.25
SCAF4-202ENST00000399804 MPIP34949 423 aa13.51□□□□□ -0.25
SCAF4-202ENST00000399804 UGT2B15P54855 530 aa13.51□□□□□ -0.25
SCAF4-202ENST00000399804 RUNX1T1Q06455 604 aa13.51□□□□□ -0.25
SCAF4-202ENST00000399804 PRRT3Q5FWE3 981 aa13.51□□□□□ -0.25
SCAF4-202ENST00000399804 GALNT15Q8N3T1 639 aa13.51□□□□□ -0.25
SCAF4-202ENST00000399804 ADAMTS19Q8TE59 1207 aa13.51□□□□□ -0.25
SCAF4-202ENST00000399804 TMEM125Q96AQ2 219 aa13.51□□□□□ -0.25
SCAF4-202ENST00000399804 MRPL38Q96DV4 380 aaKnown RBP13.51□□□□□ -0.25
SCAF4-202ENST00000399804 B3GALT2O43825 422 aa13.51□□□□□ -0.25
SCAF4-202ENST00000399804 LAMP2P13473 410 aa13.51□□□□□ -0.25
SCAF4-202ENST00000399804 CTSKP43235 329 aa13.51□□□□□ -0.25
SCAF4-202ENST00000399804 RAB28P51157 221 aa13.51□□□□□ -0.25
SCAF4-202ENST00000399804 RPA4Q13156 261 aa13.51□□□□□ -0.25
SCAF4-202ENST00000399804 ZC3H12BQ5HYM0 836 aaKnown RBP13.51□□□□□ -0.25
SCAF4-202ENST00000399804 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.51□□□□□ -0.25
SCAF4-202ENST00000399804 OR2T5Q6IEZ7 315 aa13.51□□□□□ -0.25
SCAF4-202ENST00000399804 KIAA1161Q6NSJ0 714 aa13.51□□□□□ -0.25
SCAF4-202ENST00000399804 PARM1Q6UWI2 310 aa13.51□□□□□ -0.25
SCAF4-202ENST00000399804 RNF130Q86XS8 419 aa13.51□□□□□ -0.25
SCAF4-202ENST00000399804 GATAD2AQ86YP4 633 aa13.51□□□□□ -0.25
SCAF4-202ENST00000399804 PLPP6Q8IY26 295 aa13.51□□□□□ -0.25
SCAF4-202ENST00000399804 DEPDC4Q8N2C3 294 aa13.51□□□□□ -0.25
SCAF4-202ENST00000399804 OR2T29Q8NH02 315 aa13.51□□□□□ -0.25
SCAF4-202ENST00000399804 GIPC3Q8TF64 312 aa13.51□□□□□ -0.25
SCAF4-202ENST00000399804 TEFMQ96QE5 360 aaKnown RBP13.51□□□□□ -0.25
SCAF4-202ENST00000399804 EPS8L2Q9H6S3 715 aa13.51□□□□□ -0.25
SCAF4-202ENST00000399804 TBC1D23Q9NUY8 699 aa13.51□□□□□ -0.25
SCAF4-202ENST00000399804 SCHIP1Q9P0W5 487 aaPredicted RBP13.51□□□□□ -0.25
SCAF4-202ENST00000399804 PCDHB14Q9Y5E9 798 aa13.51□□□□□ -0.25
SCAF4-202ENST00000399804 TAPBPO15533 448 aa13.51□□□□□ -0.25
SCAF4-202ENST00000399804 UGT2B17O75795 530 aa13.51□□□□□ -0.25
SCAF4-202ENST00000399804 C1orf105O95561 183 aa13.51□□□□□ -0.25
SCAF4-202ENST00000399804 IGHA2P01877 340 aa13.51□□□□□ -0.25
SCAF4-202ENST00000399804 ALPPL2P10696 532 aa13.51□□□□□ -0.25
SCAF4-202ENST00000399804 FEN1P39748 380 aaKnown RBP13.51□□□□□ -0.25
SCAF4-202ENST00000399804 TAS2R41P59536 307 aa13.51□□□□□ -0.25
SCAF4-202ENST00000399804 HSF5Q4G112 596 aaPredicted RBP13.51□□□□□ -0.25
SCAF4-202ENST00000399804 FAM180BQ6P0A1 224 aa13.51□□□□□ -0.25
SCAF4-202ENST00000399804 FUNDC1Q8IVP5 155 aa13.51□□□□□ -0.25
SCAF4-202ENST00000399804 GPR135Q8IZ08 494 aa13.51□□□□□ -0.25
SCAF4-202ENST00000399804 PARP8Q8N3A8 854 aa13.51□□□□□ -0.25
SCAF4-202ENST00000399804 NFKBIDQ8NI38 313 aa13.51□□□□□ -0.25
SCAF4-202ENST00000399804 FAM81AQ8TBF8 368 aa13.51□□□□□ -0.25
SCAF4-202ENST00000399804 GTPBP3Q969Y2 492 aaKnown RBP13.51□□□□□ -0.25
SCAF4-202ENST00000399804 KLHDC7BQ96G42 594 aa13.51□□□□□ -0.25
SCAF4-202ENST00000399804 DPH2Q9BQC3 489 aaPredicted RBP13.51□□□□□ -0.25
SCAF4-202ENST00000399804 FAM83CQ9BQN1 747 aa13.51□□□□□ -0.25
SCAF4-202ENST00000399804 INPP5KQ9BT40 448 aa13.51□□□□□ -0.25
SCAF4-202ENST00000399804 TMEM202A6NGA9 273 aa13.5□□□□□ -0.25
SCAF4-202ENST00000399804 RHPN2P1A8MT19 583 aa13.5□□□□□ -0.25
SCAF4-202ENST00000399804 TPST2O60704 377 aa13.5□□□□□ -0.25
SCAF4-202ENST00000399804 UGT2B11O75310 529 aa13.5□□□□□ -0.25
SCAF4-202ENST00000399804 ANGPTL1O95841 491 aa13.5□□□□□ -0.25
SCAF4-202ENST00000399804 DCDC1P59894 354 aa13.5□□□□□ -0.25
SCAF4-202ENST00000399804 LSM3P62310 102 aaKnown RBP13.5□□□□□ -0.25
SCAF4-202ENST00000399804 CDKL1Q00532 357 aa13.5□□□□□ -0.25
SCAF4-202ENST00000399804 ZBTB46Q86UZ6 589 aa13.5□□□□□ -0.25
SCAF4-202ENST00000399804 C12orf40Q86WS4 652 aa13.5□□□□□ -0.25
SCAF4-202ENST00000399804 PACRGLQ8N7B6 248 aa13.5□□□□□ -0.25
SCAF4-202ENST00000399804 OR2L2Q8NH16 312 aa13.5□□□□□ -0.25
SCAF4-202ENST00000399804 RAB8BQ92930 207 aa13.5□□□□□ -0.25
SCAF4-202ENST00000399804 DACT3Q96B18 629 aaPredicted RBP13.5□□□□□ -0.25
SCAF4-202ENST00000399804 GPRC5BQ9NZH0 403 aa13.5□□□□□ -0.25
SCAF4-202ENST00000399804 GPR34Q9UPC5 381 aa13.5□□□□□ -0.25
SCAF4-202ENST00000399804 A0A0G2JMZ2 1700 aa13.5□□□□□ -0.25
SCAF4-202ENST00000399804 ALDH4A1P30038 563 aa13.5□□□□□ -0.25
SCAF4-202ENST00000399804 SHMT2P34897 504 aa13.5□□□□□ -0.25
SCAF4-202ENST00000399804 C1DQ13901 141 aaKnown RBP13.5□□□□□ -0.25
SCAF4-202ENST00000399804 VMACQ2NL98 169 aa13.5□□□□□ -0.25
SCAF4-202ENST00000399804 SATL1Q86VE3 508 aa13.5□□□□□ -0.25
SCAF4-202ENST00000399804 KBTBD2Q8IY47 623 aa13.5□□□□□ -0.25
SCAF4-202ENST00000399804 CYP4Z2PQ8N1L4 340 aa13.5□□□□□ -0.25
SCAF4-202ENST00000399804 TTC29Q8NA56 475 aaPredicted RBP13.5□□□□□ -0.25
SCAF4-202ENST00000399804 RBM18Q96H35 190 aaKnown RBP13.5□□□□□ -0.25
SCAF4-202ENST00000399804 C8orf33Q9H7E9 229 aaPredicted RBP13.5□□□□□ -0.25
SCAF4-202ENST00000399804 TAS2R9Q9NYW1 312 aa13.5□□□□□ -0.25
SCAF4-202ENST00000399804 GMPR2Q9P2T1 348 aaKnown RBP13.5□□□□□ -0.25
SCAF4-202ENST00000399804 TRIOBPQ9H2D6 2365 aa13.5□□□□□ -0.25
SCAF4-202ENST00000399804 K7ESM1 405 aa13.5□□□□□ -0.25
SCAF4-202ENST00000399804 UGDHO60701 494 aa13.5□□□□□ -0.25
SCAF4-202ENST00000399804 CCT3P49368 545 aaKnown RBP13.5□□□□□ -0.25
SCAF4-202ENST00000399804 CDH15P55291 814 aa13.5□□□□□ -0.25
SCAF4-202ENST00000399804 GANABQ14697 944 aaKnown RBP13.5□□□□□ -0.25
SCAF4-202ENST00000399804 HENMT1Q5T8I9 393 aaKnown RBP13.5□□□□□ -0.25
SCAF4-202ENST00000399804 LCN8Q6JVE9 175 aa13.5□□□□□ -0.25
SCAF4-202ENST00000399804 GPR153Q6NV75 609 aa13.5□□□□□ -0.25
SCAF4-202ENST00000399804 PIK3C3Q8NEB9 887 aa13.5□□□□□ -0.25
SCAF4-202ENST00000399804 RPLP0P6Q8NHW5 317 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms