RNA–Protein interactions for RNA: ENST00000397396.5

TSPAN4-202, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-202ENST00000397396 E9PBE3 544 aa22.51■■□□□ 1.19
TSPAN4-202ENST00000397396 UBDO15205 165 aa22.51■■□□□ 1.19
TSPAN4-202ENST00000397396 GDF9O60383 454 aa22.51■■□□□ 1.19
TSPAN4-202ENST00000397396 NRP2O60462 931 aa22.51■■□□□ 1.19
TSPAN4-202ENST00000397396 KLHL41O60662 606 aa22.51■■□□□ 1.19
TSPAN4-202ENST00000397396 SEC22BO75396 215 aa22.51■■□□□ 1.19
TSPAN4-202ENST00000397396 TGFB1P01137 390 aa22.51■■□□□ 1.19
TSPAN4-202ENST00000397396 SERPIND1P05546 499 aa22.51■■□□□ 1.19
TSPAN4-202ENST00000397396 NELFEP18615 380 aaKnown RBP22.51■■□□□ 1.19
TSPAN4-202ENST00000397396 RAP1GDS1P52306 607 aa22.51■■□□□ 1.19
TSPAN4-202ENST00000397396 EMX2Q04743 252 aa22.51■■□□□ 1.19
TSPAN4-202ENST00000397396 TUBB3Q13509 450 aa22.51■■□□□ 1.19
TSPAN4-202ENST00000397396 GALNTL6Q49A17 601 aa22.51■■□□□ 1.19
TSPAN4-202ENST00000397396 TCTE1Q5JU00 501 aa22.51■■□□□ 1.19
TSPAN4-202ENST00000397396 SNAP47Q5SQN1 464 aa22.51■■□□□ 1.19
TSPAN4-202ENST00000397396 DEPDC1Q5TB30 811 aa22.51■■□□□ 1.19
TSPAN4-202ENST00000397396 ADNP2Q6IQ32 1131 aa22.51■■□□□ 1.19
TSPAN4-202ENST00000397396 ASCL5Q7RTU5 278 aa22.51■■□□□ 1.19
TSPAN4-202ENST00000397396 GLRX5Q86SX6 157 aa22.51■■□□□ 1.19
TSPAN4-202ENST00000397396 D2HGDHQ8N465 521 aa22.51■■□□□ 1.19
TSPAN4-202ENST00000397396 QRFPRQ96P65 431 aa22.51■■□□□ 1.19
TSPAN4-202ENST00000397396 ASIC5Q9NY37 505 aa22.51■■□□□ 1.19
TSPAN4-202ENST00000397396 NOP53Q9NZM5 478 aaKnown RBP22.51■■□□□ 1.19
TSPAN4-202ENST00000397396 TMEM9Q9P0T7 183 aa22.51■■□□□ 1.19
TSPAN4-202ENST00000397396 HEY2Q9UBP5 337 aa22.51■■□□□ 1.19
TSPAN4-202ENST00000397396 EIF3LQ9Y262 564 aaKnown RBP22.51■■□□□ 1.19
TSPAN4-202ENST00000397396 HOXB3P14651 431 aaPredicted RBP22.5■■□□□ 1.19
TSPAN4-202ENST00000397396 TSFMP43897 325 aaKnown RBP22.5■■□□□ 1.19
TSPAN4-202ENST00000397396 STX1BP61266 288 aa22.5■■□□□ 1.19
TSPAN4-202ENST00000397396 RPL38P63173 70 aaKnown RBP22.5■■□□□ 1.19
TSPAN4-202ENST00000397396 GSTA3Q16772 222 aa22.5■■□□□ 1.19
TSPAN4-202ENST00000397396 ADPRMQ3LIE5 342 aa22.5■■□□□ 1.19
TSPAN4-202ENST00000397396 FAM219BQ5XKK7 198 aa22.5■■□□□ 1.19
TSPAN4-202ENST00000397396 PAGE2Q7Z2X7 111 aa22.5■■□□□ 1.19
TSPAN4-202ENST00000397396 ARHGAP22Q7Z5H3 698 aa22.5■■□□□ 1.19
TSPAN4-202ENST00000397396 VN1R4Q7Z5H5 301 aa22.5■■□□□ 1.19
TSPAN4-202ENST00000397396 MCATQ8IVS2 390 aaKnown RBP22.5■■□□□ 1.19
TSPAN4-202ENST00000397396 NETO1Q8TDF5 533 aa22.5■■□□□ 1.19
TSPAN4-202ENST00000397396 RGMAQ96B86 450 aa22.5■■□□□ 1.19
TSPAN4-202ENST00000397396 TM4SF19Q96DZ7 209 aa22.5■■□□□ 1.19
TSPAN4-202ENST00000397396 TMEM74Q96NL1 305 aa22.5■■□□□ 1.19
TSPAN4-202ENST00000397396 SLC6A16Q9GZN6 736 aa22.5■■□□□ 1.19
TSPAN4-202ENST00000397396 ROGDIQ9GZN7 287 aa22.5■■□□□ 1.19
TSPAN4-202ENST00000397396 REXO4Q9GZR2 422 aaKnown RBP22.5■■□□□ 1.19
TSPAN4-202ENST00000397396 SIRT5Q9NXA8 310 aa22.5■■□□□ 1.19
TSPAN4-202ENST00000397396 ZKSCAN7Q9P0L1 754 aaPredicted RBP22.5■■□□□ 1.19
TSPAN4-202ENST00000397396 RUVBL1Q9Y265 456 aaKnown RBP22.5■■□□□ 1.19
TSPAN4-202ENST00000397396 ASCC3Q8N3C0 2202 aaKnown RBP22.5■■□□□ 1.19
TSPAN4-202ENST00000397396 RP1P56715 2156 aa22.5■■□□□ 1.19
TSPAN4-202ENST00000397396 A0A088AWK7 358 aa22.49■■□□□ 1.19
TSPAN4-202ENST00000397396 IGHV5-10-1A0A0J9YXX1 117 aa22.49■■□□□ 1.19
TSPAN4-202ENST00000397396 LOC105378220A0A1B0GUY1 285 aaPredicted RBP22.49■■□□□ 1.19
TSPAN4-202ENST00000397396 H0YGG7 62 aa22.49■■□□□ 1.19
TSPAN4-202ENST00000397396 IDO1P14902 403 aa22.49■■□□□ 1.19
TSPAN4-202ENST00000397396 ZNF10P21506 573 aaPredicted RBP22.49■■□□□ 1.19
TSPAN4-202ENST00000397396 ATP4BP51164 291 aa22.49■■□□□ 1.19
TSPAN4-202ENST00000397396 ARF3P61204 181 aaPredicted RBP22.49■■□□□ 1.19
TSPAN4-202ENST00000397396 ACY1Q03154 408 aa22.49■■□□□ 1.19
TSPAN4-202ENST00000397396 TRIM40Q6P9F5 258 aa22.49■■□□□ 1.19
TSPAN4-202ENST00000397396 RBM44Q6ZP01 1051 aaKnown RBP22.49■■□□□ 1.19
TSPAN4-202ENST00000397396 RNF175Q8N4F7 328 aa22.49■■□□□ 1.19
TSPAN4-202ENST00000397396 CSNK1A1LQ8N752 337 aa22.49■■□□□ 1.19
TSPAN4-202ENST00000397396 GAL3ST3Q96A11 431 aa22.49■■□□□ 1.19
TSPAN4-202ENST00000397396 CCDC74BQ96LY2 380 aa22.49■■□□□ 1.19
TSPAN4-202ENST00000397396 OR51B5Q9H339 312 aa22.49■■□□□ 1.19
TSPAN4-202ENST00000397396 FAM60AQ9NP50 221 aa22.49■■□□□ 1.19
TSPAN4-202ENST00000397396 DNAH14Q0VDD8 3507 aa22.49■■□□□ 1.19
TSPAN4-202ENST00000397396 LRIT2A6NDA9 550 aa22.48■■□□□ 1.19
TSPAN4-202ENST00000397396 TMX2-CTNND1H3BSU7 103 aa22.48■■□□□ 1.19
TSPAN4-202ENST00000397396 RRP9O43818 475 aaKnown RBP22.48■■□□□ 1.19
TSPAN4-202ENST00000397396 PRPS2P11908 318 aa22.48■■□□□ 1.19
TSPAN4-202ENST00000397396 NCF2P19878 526 aaPredicted RBP22.48■■□□□ 1.19
TSPAN4-202ENST00000397396 SEPHS1P49903 392 aa22.48■■□□□ 1.19
TSPAN4-202ENST00000397396 TBL3Q12788 808 aaKnown RBP22.48■■□□□ 1.19
TSPAN4-202ENST00000397396 FRMPD2BQ6IN97 320 aa22.48■■□□□ 1.19
TSPAN4-202ENST00000397396 NIPAL1Q6NVV3 410 aa22.48■■□□□ 1.19
TSPAN4-202ENST00000397396 ZNF574Q6ZN55 896 aaPredicted RBP22.48■■□□□ 1.19
TSPAN4-202ENST00000397396 ABHD13Q7L211 337 aa22.48■■□□□ 1.19
TSPAN4-202ENST00000397396 ALYREFQ86V81 257 aaKnown RBP22.48■■□□□ 1.19
TSPAN4-202ENST00000397396 SLITRK4Q8IW52 837 aa22.48■■□□□ 1.19
TSPAN4-202ENST00000397396 METTL4Q8N3J2 472 aa22.48■■□□□ 1.19
TSPAN4-202ENST00000397396 CHTF18Q8WVB6 975 aa22.48■■□□□ 1.19
TSPAN4-202ENST00000397396 FCRL4Q96PJ5 515 aa22.48■■□□□ 1.19
TSPAN4-202ENST00000397396 LRRC37BQ96QE4 947 aa22.48■■□□□ 1.19
TSPAN4-202ENST00000397396 ENAMQ9NRM1 1142 aa22.48■■□□□ 1.19
TSPAN4-202ENST00000397396 ADAM29Q9UKF5 820 aa22.48■■□□□ 1.19
TSPAN4-202ENST00000397396 ASXL3Q9C0F0 2248 aa22.48■■□□□ 1.19
TSPAN4-202ENST00000397396 SLC22A2O15244 555 aa22.47■■□□□ 1.19
TSPAN4-202ENST00000397396 ETHE1O95571 254 aa22.47■■□□□ 1.19
TSPAN4-202ENST00000397396 ADSLP30566 484 aaPredicted RBP22.47■■□□□ 1.19
TSPAN4-202ENST00000397396 GABRA4P48169 554 aa22.47■■□□□ 1.19
TSPAN4-202ENST00000397396 VSX2P58304 361 aaPredicted RBP22.47■■□□□ 1.19
TSPAN4-202ENST00000397396 SQLEQ14534 574 aa22.47■■□□□ 1.19
TSPAN4-202ENST00000397396 TRIP6Q15654 476 aaKnown RBP22.47■■□□□ 1.19
TSPAN4-202ENST00000397396 NDUFA9Q16795 377 aa22.47■■□□□ 1.19
TSPAN4-202ENST00000397396 TOR1AIP1Q5JTV8 583 aa22.47■■□□□ 1.19
TSPAN4-202ENST00000397396 GALNT18Q6P9A2 607 aa22.47■■□□□ 1.19
TSPAN4-202ENST00000397396 NUDT13Q86X67 352 aa22.47■■□□□ 1.19
TSPAN4-202ENST00000397396 OR2L5Q8NG80 312 aa22.47■■□□□ 1.19
TSPAN4-202ENST00000397396 APIPQ96GX9 242 aa22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms