RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 IRF8Q02556 426 aa17.68■□□□□ 0.42
PCDHA1-202ENST00000394633 LMAN2Q12907 356 aa17.68■□□□□ 0.42
PCDHA1-202ENST00000394633 DDX39BQ13838 428 aaKnown RBP17.68■□□□□ 0.42
PCDHA1-202ENST00000394633 TIGD6Q17RP2 521 aa17.68■□□□□ 0.42
PCDHA1-202ENST00000394633 SERPINA13PQ6UXR4 307 aa17.68■□□□□ 0.42
PCDHA1-202ENST00000394633 CCDC103Q8IW40 242 aa17.68■□□□□ 0.42
PCDHA1-202ENST00000394633 DNAJC22Q8N4W6 341 aa17.68■□□□□ 0.42
PCDHA1-202ENST00000394633 GGHQ92820 318 aa17.68■□□□□ 0.42
PCDHA1-202ENST00000394633 SCRN2Q96FV2 425 aa17.68■□□□□ 0.42
PCDHA1-202ENST00000394633 CPNE5Q9HCH3 593 aa17.68■□□□□ 0.42
PCDHA1-202ENST00000394633 MRPL17Q9NRX2 175 aaKnown RBP17.68■□□□□ 0.42
PCDHA1-202ENST00000394633 FKBP14Q9NWM8 211 aa17.68■□□□□ 0.42
PCDHA1-202ENST00000394633 ITGB1BP2Q9UKP3 347 aa17.68■□□□□ 0.42
PCDHA1-202ENST00000394633 RUVBL1Q9Y265 456 aaKnown RBP17.68■□□□□ 0.42
PCDHA1-202ENST00000394633 PADI2Q9Y2J8 665 aa17.68■□□□□ 0.42
PCDHA1-202ENST00000394633 TESMINQ9Y4I5 508 aa17.68■□□□□ 0.42
PCDHA1-202ENST00000394633 ISPDA4D126 451 aa17.67■□□□□ 0.42
PCDHA1-202ENST00000394633 DSCR3O14972 297 aa17.67■□□□□ 0.42
PCDHA1-202ENST00000394633 SCAMP2O15127 329 aaKnown RBP17.67■□□□□ 0.42
PCDHA1-202ENST00000394633 LILRB3O75022 631 aa17.67■□□□□ 0.42
PCDHA1-202ENST00000394633 GCM2O75603 506 aaPredicted RBP17.67■□□□□ 0.42
PCDHA1-202ENST00000394633 CDK1P06493 297 aa17.67■□□□□ 0.42
PCDHA1-202ENST00000394633 SP140Q13342 867 aa17.67■□□□□ 0.42
PCDHA1-202ENST00000394633 GAB1Q13480 694 aa17.67■□□□□ 0.42
PCDHA1-202ENST00000394633 KCNJ8Q15842 424 aa17.67■□□□□ 0.42
PCDHA1-202ENST00000394633 C9orf50Q5SZB4 431 aa17.67■□□□□ 0.42
PCDHA1-202ENST00000394633 SLC46A3Q7Z3Q1 461 aa17.67■□□□□ 0.42
PCDHA1-202ENST00000394633 OR2AP1Q8NGE2 309 aa17.67■□□□□ 0.42
PCDHA1-202ENST00000394633 HTRA1Q92743 480 aa17.67■□□□□ 0.42
PCDHA1-202ENST00000394633 FEVQ99581 238 aa17.67■□□□□ 0.42
PCDHA1-202ENST00000394633 RAD9AQ99638 391 aa17.67■□□□□ 0.42
PCDHA1-202ENST00000394633 SPATA9Q9BWV2 254 aa17.67■□□□□ 0.42
PCDHA1-202ENST00000394633 SPATA6Q9NWH7 488 aaPredicted RBP17.67■□□□□ 0.42
PCDHA1-202ENST00000394633 ADPRHL2Q9NX46 363 aa17.67■□□□□ 0.42
PCDHA1-202ENST00000394633 LYVE1Q9Y5Y7 322 aa17.67■□□□□ 0.42
PCDHA1-202ENST00000394633 GRXCR1A8MXD5 290 aa17.67■□□□□ 0.42
PCDHA1-202ENST00000394633 TAF4O00268 1085 aa17.67■□□□□ 0.42
PCDHA1-202ENST00000394633 SLC16A5O15375 505 aa17.67■□□□□ 0.42
PCDHA1-202ENST00000394633 TBX1O43435 398 aa17.67■□□□□ 0.42
PCDHA1-202ENST00000394633 C1SP09871 688 aa17.67■□□□□ 0.42
PCDHA1-202ENST00000394633 DBTP11182 482 aaKnown RBP17.67■□□□□ 0.42
PCDHA1-202ENST00000394633 PABPC1P11940 636 aaKnown RBP17.67■□□□□ 0.42
PCDHA1-202ENST00000394633 TPTEP56180 551 aa17.67■□□□□ 0.42
PCDHA1-202ENST00000394633 RAB33AQ14088 237 aa17.67■□□□□ 0.42
PCDHA1-202ENST00000394633 MLIPQ5VWP3 458 aa17.67■□□□□ 0.42
PCDHA1-202ENST00000394633 LIPJQ5W064 366 aa17.67■□□□□ 0.42
PCDHA1-202ENST00000394633 STEAP3Q658P3 488 aa17.67■□□□□ 0.42
PCDHA1-202ENST00000394633 SCAIQ8N9R8 606 aa17.67■□□□□ 0.42
PCDHA1-202ENST00000394633 SP7Q8TDD2 431 aaPredicted RBP17.67■□□□□ 0.42
PCDHA1-202ENST00000394633 MYDGFQ969H8 173 aa17.67■□□□□ 0.42
PCDHA1-202ENST00000394633 C11orf24Q96F05 449 aaPredicted RBP17.67■□□□□ 0.42
PCDHA1-202ENST00000394633 DOHHQ9BU89 302 aa17.67■□□□□ 0.42
PCDHA1-202ENST00000394633 C6orf62Q9GZU0 229 aaPredicted RBP17.67■□□□□ 0.42
PCDHA1-202ENST00000394633 ABCB8Q9NUT2 735 aa17.67■□□□□ 0.42
PCDHA1-202ENST00000394633 DOCK6Q96HP0 2047 aa17.66■□□□□ 0.42
PCDHA1-202ENST00000394633 CLCA1A8K7I4 914 aa17.66■□□□□ 0.42
PCDHA1-202ENST00000394633 GABRR3A8MPY1 467 aa17.66■□□□□ 0.42
PCDHA1-202ENST00000394633 CD70P32970 193 aa17.66■□□□□ 0.42
PCDHA1-202ENST00000394633 PCGF2P35227 344 aa17.66■□□□□ 0.42
PCDHA1-202ENST00000394633 PXNP49023 591 aaPredicted RBP17.66■□□□□ 0.42
PCDHA1-202ENST00000394633 STK19P49842 368 aaPredicted RBP17.66■□□□□ 0.42
PCDHA1-202ENST00000394633 AP1S2P56377 157 aa17.66■□□□□ 0.42
PCDHA1-202ENST00000394633 RAE1P78406 368 aaKnown RBP17.66■□□□□ 0.42
PCDHA1-202ENST00000394633 ACSM2AQ08AH3 577 aa17.66■□□□□ 0.42
PCDHA1-202ENST00000394633 RGNQ15493 299 aa17.66■□□□□ 0.42
PCDHA1-202ENST00000394633 BCL2A1Q16548 175 aa17.66■□□□□ 0.42
PCDHA1-202ENST00000394633 ZNF181Q2M3W8 571 aa17.66■□□□□ 0.42
PCDHA1-202ENST00000394633 XKR6Q5GH73 641 aa17.66■□□□□ 0.42
PCDHA1-202ENST00000394633 PLEKHS1Q5SXH7 462 aa17.66■□□□□ 0.42
PCDHA1-202ENST00000394633 ACSM2BQ68CK6 577 aa17.66■□□□□ 0.42
PCDHA1-202ENST00000394633 TUBA3EQ6PEY2 450 aa17.66■□□□□ 0.42
PCDHA1-202ENST00000394633 USP43Q70EL4 1123 aa17.66■□□□□ 0.42
PCDHA1-202ENST00000394633 DNAJB7Q7Z6W7 309 aaPredicted RBP17.66■□□□□ 0.42
PCDHA1-202ENST00000394633 FAM217AQ8IXS0 508 aa17.66■□□□□ 0.42
PCDHA1-202ENST00000394633 SLC5A8Q8N695 610 aa17.66■□□□□ 0.42
PCDHA1-202ENST00000394633 FAM83FQ8NEG4 500 aaPredicted RBP17.66■□□□□ 0.42
PCDHA1-202ENST00000394633 MAGEB10Q96LZ2 347 aaPredicted RBP17.66■□□□□ 0.42
PCDHA1-202ENST00000394633 NXF2Q9GZY0 626 aaKnown RBP17.66■□□□□ 0.42
PCDHA1-202ENST00000394633 RAD18Q9NS91 495 aa17.66■□□□□ 0.42
PCDHA1-202ENST00000394633 NDUFAF4Q9P032 175 aa17.66■□□□□ 0.42
PCDHA1-202ENST00000394633 BTNL2Q9UIR0 455 aa17.66■□□□□ 0.42
PCDHA1-202ENST00000394633 HELZP42694 1942 aaKnown RBP17.66■□□□□ 0.42
PCDHA1-202ENST00000394633 E7EQ34 232 aa17.66■□□□□ 0.42
PCDHA1-202ENST00000394633 TNFRSF11BO00300 401 aa17.66■□□□□ 0.42
PCDHA1-202ENST00000394633 BNIP3LO60238 219 aa17.66■□□□□ 0.42
PCDHA1-202ENST00000394633 ETHE1O95571 254 aa17.66■□□□□ 0.42
PCDHA1-202ENST00000394633 GSTT2P0CG29 244 aa17.66■□□□□ 0.42
PCDHA1-202ENST00000394633 GSTT2BP0CG30 244 aa17.66■□□□□ 0.42
PCDHA1-202ENST00000394633 ATP1B2P14415 290 aaPredicted RBP17.66■□□□□ 0.42
PCDHA1-202ENST00000394633 TNFRSF1BP20333 461 aa17.66■□□□□ 0.42
PCDHA1-202ENST00000394633 CTSOP43234 321 aaPredicted RBP17.66■□□□□ 0.42
PCDHA1-202ENST00000394633 SEPHS1P49903 392 aa17.66■□□□□ 0.42
PCDHA1-202ENST00000394633 NUDT6P53370 316 aa17.66■□□□□ 0.42
PCDHA1-202ENST00000394633 LRRC73Q5JTD7 316 aa17.66■□□□□ 0.42
PCDHA1-202ENST00000394633 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.66■□□□□ 0.42
PCDHA1-202ENST00000394633 TXNDC8Q6A555 127 aa17.66■□□□□ 0.42
PCDHA1-202ENST00000394633 USP45Q70EL2 814 aa17.66■□□□□ 0.42
PCDHA1-202ENST00000394633 NAGSQ8N159 534 aa17.66■□□□□ 0.42
PCDHA1-202ENST00000394633 ECHDC3Q96DC8 303 aa17.66■□□□□ 0.42
PCDHA1-202ENST00000394633 CDADC1Q9BWV3 514 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 276.4 ms