RNA–Protein interactions for RNA: ENST00000381272.5

SMC6-202, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 5

Gene SMC6, Length 1,803 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-202ENST00000381272 DERL2Q9GZP9 239 aa3.62□□□□□ -1.83
SMC6-202ENST00000381272 CCDC68Q9H2F9 335 aa3.62□□□□□ -1.83
SMC6-202ENST00000381272 CLK4Q9HAZ1 481 aaKnown RBP3.62□□□□□ -1.83
SMC6-202ENST00000381272 POPDC3Q9HBV1 291 aa3.62□□□□□ -1.83
SMC6-202ENST00000381272 SYTL2Q9HCH5 934 aa3.62□□□□□ -1.83
SMC6-202ENST00000381272 TLR8Q9NR97 1041 aaKnown RBP3.62□□□□□ -1.83
SMC6-202ENST00000381272 SDR39U1Q9NRG7 319 aaPredicted RBP3.62□□□□□ -1.83
SMC6-202ENST00000381272 AGPAT4Q9NRZ5 378 aa3.62□□□□□ -1.83
SMC6-202ENST00000381272 MRGBPQ9NV56 204 aa3.62□□□□□ -1.83
SMC6-202ENST00000381272 AIG1Q9NVV5 245 aa3.62□□□□□ -1.83
SMC6-202ENST00000381272 NLE1Q9NVX2 485 aaPredicted RBP3.62□□□□□ -1.83
SMC6-202ENST00000381272 TAS2R13Q9NYV9 303 aa3.62□□□□□ -1.83
SMC6-202ENST00000381272 CD274Q9NZQ7 290 aa3.62□□□□□ -1.83
SMC6-202ENST00000381272 ACTR3BQ9P1U1 418 aa3.62□□□□□ -1.83
SMC6-202ENST00000381272 ABCD2Q9UBJ2 740 aa3.62□□□□□ -1.83
SMC6-202ENST00000381272 UBA2Q9UBT2 640 aaPredicted RBP3.62□□□□□ -1.83
SMC6-202ENST00000381272 RSL24D1Q9UHA3 163 aaKnown RBP3.62□□□□□ -1.83
SMC6-202ENST00000381272 ZNF225Q9UK10 706 aa3.62□□□□□ -1.83
SMC6-202ENST00000381272 PCTPQ9UKL6 214 aa3.62□□□□□ -1.83
SMC6-202ENST00000381272 SLC8A2Q9UPR5 921 aa3.62□□□□□ -1.83
SMC6-202ENST00000381272 SQORQ9Y6N5 450 aa3.62□□□□□ -1.83
SMC6-202ENST00000381272 CHD5Q8TDI0 1954 aa3.62□□□□□ -1.83
SMC6-202ENST00000381272 A0A1W2PP18 115 aa3.61□□□□□ -1.83
SMC6-202ENST00000381272 MTMR11A4FU01 709 aa3.61□□□□□ -1.83
SMC6-202ENST00000381272 MANSC4A6NHS7 340 aaPredicted RBP3.61□□□□□ -1.83
SMC6-202ENST00000381272 SLC38A8A6NNN8 435 aa3.61□□□□□ -1.83
SMC6-202ENST00000381272 TMX2-CTNND1H3BSU7 103 aa3.61□□□□□ -1.83
SMC6-202ENST00000381272 EI24O14681 340 aa3.61□□□□□ -1.83
SMC6-202ENST00000381272 KIAA0355O15063 1070 aa3.61□□□□□ -1.83
SMC6-202ENST00000381272 ACOX3O15254 700 aa3.61□□□□□ -1.83
SMC6-202ENST00000381272 INSIG1O15503 277 aa3.61□□□□□ -1.83
SMC6-202ENST00000381272 CLOCKO15516 846 aa3.61□□□□□ -1.83
SMC6-202ENST00000381272 SEPT4O43236 478 aa3.61□□□□□ -1.83
SMC6-202ENST00000381272 ACSL4O60488 711 aa3.61□□□□□ -1.83
SMC6-202ENST00000381272 SYNCRIPO60506 623 aaKnown RBP3.61□□□□□ -1.83
SMC6-202ENST00000381272 TLR5O60602 858 aa3.61□□□□□ -1.83
SMC6-202ENST00000381272 SNX2O60749 519 aa3.61□□□□□ -1.83
SMC6-202ENST00000381272 VPS4BO75351 444 aa3.61□□□□□ -1.83
SMC6-202ENST00000381272 VPS26AO75436 327 aa3.61□□□□□ -1.83
SMC6-202ENST00000381272 TMCC1O94876 653 aa3.61□□□□□ -1.83
SMC6-202ENST00000381272 BMP10O95393 424 aa3.61□□□□□ -1.83
SMC6-202ENST00000381272 MATN4O95460 622 aa3.61□□□□□ -1.83
SMC6-202ENST00000381272 SNAP29O95721 258 aa3.61□□□□□ -1.83
SMC6-202ENST00000381272 C1RP00736 705 aa3.61□□□□□ -1.83
SMC6-202ENST00000381272 EPOP01588 193 aa3.61□□□□□ -1.83
SMC6-202ENST00000381272 IGLV3-27P01718 113 aa3.61□□□□□ -1.83
SMC6-202ENST00000381272 UROSP10746 265 aa3.61□□□□□ -1.83
SMC6-202ENST00000381272 IRF1P10914 325 aa3.61□□□□□ -1.83
SMC6-202ENST00000381272 PKMP14618 531 aaKnown RBP3.61□□□□□ -1.83
SMC6-202ENST00000381272 IDO1P14902 403 aa3.61□□□□□ -1.83
SMC6-202ENST00000381272 CTPS1P17812 591 aa3.61□□□□□ -1.83
SMC6-202ENST00000381272 MYF6P23409 242 aa3.61□□□□□ -1.83
SMC6-202ENST00000381272 HRH2P25021 359 aa3.61□□□□□ -1.83
SMC6-202ENST00000381272 MPLP40238 635 aa3.61□□□□□ -1.83
SMC6-202ENST00000381272 MAGEA11P43364 429 aa3.61□□□□□ -1.83
SMC6-202ENST00000381272 YAP1P46937 504 aaKnown RBP3.61□□□□□ -1.83
SMC6-202ENST00000381272 STT3AP46977 705 aa3.61□□□□□ -1.83
SMC6-202ENST00000381272 HTR6P50406 440 aa3.61□□□□□ -1.83
SMC6-202ENST00000381272 CDK9P50750 372 aaKnown RBP3.61□□□□□ -1.83
SMC6-202ENST00000381272 CCT8P50990 548 aa3.61□□□□□ -1.83
SMC6-202ENST00000381272 CLCN2P51788 898 aa3.61□□□□□ -1.83
SMC6-202ENST00000381272 POLR2JP52435 117 aaKnown RBP3.61□□□□□ -1.83
SMC6-202ENST00000381272 DGKQP52824 942 aa3.61□□□□□ -1.83
SMC6-202ENST00000381272 OR4D2P58180 307 aa3.61□□□□□ -1.83
SMC6-202ENST00000381272 HPCAP84074 193 aa3.61□□□□□ -1.83
SMC6-202ENST00000381272 GNA12Q03113 381 aa3.61□□□□□ -1.83
SMC6-202ENST00000381272 BNIP2Q12982 314 aa3.61□□□□□ -1.83
SMC6-202ENST00000381272 IL10RAQ13651 578 aa3.61□□□□□ -1.83
SMC6-202ENST00000381272 SELPLGQ14242 412 aa3.61□□□□□ -1.83
SMC6-202ENST00000381272 TAF1AQ15573 450 aaPredicted RBP3.61□□□□□ -1.83
SMC6-202ENST00000381272 UAP1L1Q3KQV9 507 aa3.61□□□□□ -1.83
SMC6-202ENST00000381272 C3orf36Q3SXR2 165 aa3.61□□□□□ -1.83
SMC6-202ENST00000381272 ZIK1Q3SY52 487 aaPredicted RBP3.61□□□□□ -1.83
SMC6-202ENST00000381272 SLC36A3Q495N2 470 aa3.61□□□□□ -1.83
SMC6-202ENST00000381272 INTS11Q5TA45 600 aaKnown RBP3.61□□□□□ -1.83
SMC6-202ENST00000381272 LCN8Q6JVE9 175 aa3.61□□□□□ -1.83
SMC6-202ENST00000381272 NANOGP8Q6NSW7 305 aa3.61□□□□□ -1.83
SMC6-202ENST00000381272 AFTPHQ6ULP2 937 aa3.61□□□□□ -1.83
SMC6-202ENST00000381272 PRSS55Q6UWB4 352 aaPredicted RBP3.61□□□□□ -1.83
SMC6-202ENST00000381272 GPRIN3Q6ZVF9 776 aa3.61□□□□□ -1.83
SMC6-202ENST00000381272 SLC24A5Q71RS6 500 aa3.61□□□□□ -1.83
SMC6-202ENST00000381272 CHST15Q7LFX5 561 aaPredicted RBP3.61□□□□□ -1.83
SMC6-202ENST00000381272 TAS2R42Q7RTR8 314 aa3.61□□□□□ -1.83
SMC6-202ENST00000381272 SPATA19Q7Z5L4 167 aa3.61□□□□□ -1.83
SMC6-202ENST00000381272 GPR141Q7Z602 305 aa3.61□□□□□ -1.83
SMC6-202ENST00000381272 ZNF575Q86XF7 245 aa3.61□□□□□ -1.83
SMC6-202ENST00000381272 GPSM1Q86YR5 675 aa3.61□□□□□ -1.83
SMC6-202ENST00000381272 ERI1Q8IV48 349 aaKnown RBP3.61□□□□□ -1.83
SMC6-202ENST00000381272 DENND1CQ8IV53 801 aa3.61□□□□□ -1.83
SMC6-202ENST00000381272 KIAA2013Q8IYS2 634 aa3.61□□□□□ -1.83
SMC6-202ENST00000381272 TMEM199Q8N511 208 aa3.61□□□□□ -1.83
SMC6-202ENST00000381272 NKAPQ8N5F7 415 aaKnown RBP3.61□□□□□ -1.83
SMC6-202ENST00000381272 FNDC5Q8NAU1 212 aa3.61□□□□□ -1.83
SMC6-202ENST00000381272 OR52B6Q8NGF0 335 aa3.61□□□□□ -1.83
SMC6-202ENST00000381272 MAGEE2Q8TD90 523 aaPredicted RBP3.61□□□□□ -1.83
SMC6-202ENST00000381272 WBP2Q969T9 261 aa3.61□□□□□ -1.83
SMC6-202ENST00000381272 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.61□□□□□ -1.834e-10■■■■■ 86.3
SMC6-202ENST00000381272 CENPNQ96H22 339 aaPredicted RBP3.61□□□□□ -1.83
SMC6-202ENST00000381272 VPS50Q96JG6 964 aa3.61□□□□□ -1.83
SMC6-202ENST00000381272 PPM1MQ96MI6 270 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms